RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 TMCO3Q6UWJ1 677 aa11.47□□□□□ -0.57
ZNF550-203ENST00000376230 RASGRP2Q7LDG7 609 aa11.47□□□□□ -0.57
ZNF550-203ENST00000376230 ADGRA1Q86SQ6 560 aa11.47□□□□□ -0.57
ZNF550-203ENST00000376230 CRACR2BQ8N4Y2 399 aaPredicted RBP11.47□□□□□ -0.57
ZNF550-203ENST00000376230 DRC1Q96MC2 740 aa11.47□□□□□ -0.57
ZNF550-203ENST00000376230 MST1RQ04912 1400 aa11.47□□□□□ -0.57
ZNF550-203ENST00000376230 N4BP3O15049 544 aa11.47□□□□□ -0.57
ZNF550-203ENST00000376230 TRIM37O94972 964 aa11.47□□□□□ -0.57
ZNF550-203ENST00000376230 SLURP2P0DP57 97 aa11.47□□□□□ -0.57
ZNF550-203ENST00000376230 BRAPQ7Z569 592 aa11.47□□□□□ -0.57
ZNF550-203ENST00000376230 NOSTRINQ8IVI9 506 aa11.47□□□□□ -0.57
ZNF550-203ENST00000376230 TMEM87BQ96K49 555 aa11.47□□□□□ -0.57
ZNF550-203ENST00000376230 NCAPD2Q15021 1401 aa11.47□□□□□ -0.57
ZNF550-203ENST00000376230 TMEM232C9JQI7 657 aa11.46□□□□□ -0.57
ZNF550-203ENST00000376230 SEC31AO94979 1220 aaKnown RBP11.46□□□□□ -0.57
ZNF550-203ENST00000376230 UBE3CQ15386 1083 aa11.46□□□□□ -0.57
ZNF550-203ENST00000376230 LRRN4CLQ8ND94 238 aa11.46□□□□□ -0.57
ZNF550-203ENST00000376230 NUP88Q99567 741 aaPredicted RBP11.46□□□□□ -0.57
ZNF550-203ENST00000376230 CSRNP2Q9H175 543 aa11.46□□□□□ -0.57
ZNF550-203ENST00000376230 ARGLU1Q9NWB6 273 aaPredicted RBP11.46□□□□□ -0.57
ZNF550-203ENST00000376230 NAPAP54920 295 aa11.46□□□□□ -0.57
ZNF550-203ENST00000376230 MECOMQ03112 1051 aa11.46□□□□□ -0.57
ZNF550-203ENST00000376230 ZYXQ15942 572 aaKnown RBP11.46□□□□□ -0.57
ZNF550-203ENST00000376230 PARP10Q53GL7 1025 aa11.46□□□□□ -0.57
ZNF550-203ENST00000376230 LRRC47Q8N1G4 583 aaKnown RBP11.46□□□□□ -0.57
ZNF550-203ENST00000376230 GPR108Q9NPR9 543 aa11.46□□□□□ -0.57
ZNF550-203ENST00000376230 DDX41Q9UJV9 622 aaKnown RBP11.46□□□□□ -0.57
ZNF550-203ENST00000376230 MINPP1Q9UNW1 487 aa11.46□□□□□ -0.57
ZNF550-203ENST00000376230 SCAF8Q9UPN6 1271 aaKnown RBP11.46□□□□□ -0.57
ZNF550-203ENST00000376230 HPS5Q9UPZ3 1129 aa11.46□□□□□ -0.57
ZNF550-203ENST00000376230 CTIFO43310 598 aaKnown RBP11.46□□□□□ -0.58
ZNF550-203ENST00000376230 KRT18P05783 430 aaKnown RBP11.46□□□□□ -0.58
ZNF550-203ENST00000376230 TEX11Q8IYF3 940 aa11.46□□□□□ -0.58
ZNF550-203ENST00000376230 ANKRD20A12PQ8NF67 263 aa11.46□□□□□ -0.58
ZNF550-203ENST00000376230 ZMYM6O95789 1325 aa11.46□□□□□ -0.58
ZNF550-203ENST00000376230 EPB41L2O43491 1005 aaKnown RBP11.45□□□□□ -0.58
ZNF550-203ENST00000376230 KRT2P35908 639 aa11.45□□□□□ -0.58
ZNF550-203ENST00000376230 TNNI2P48788 182 aa11.45□□□□□ -0.58
ZNF550-203ENST00000376230 EIF5P55010 431 aaKnown RBP11.45□□□□□ -0.58
ZNF550-203ENST00000376230 FILIP1LQ4L180 1135 aa11.45□□□□□ -0.58
ZNF550-203ENST00000376230 NEK11Q8NG66 645 aa11.45□□□□□ -0.58
ZNF550-203ENST00000376230 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.45□□□□□ -0.58
ZNF550-203ENST00000376230 CARD6Q9BX69 1037 aa11.45□□□□□ -0.58
ZNF550-203ENST00000376230 PRR29P0C7W0 189 aa11.45□□□□□ -0.58
ZNF550-203ENST00000376230 SMARCC1Q92922 1105 aaPredicted RBP11.45□□□□□ -0.58
ZNF550-203ENST00000376230 MXD3Q9BW11 206 aa11.45□□□□□ -0.58
ZNF550-203ENST00000376230 SAMSN1Q9NSI8 373 aaKnown RBP11.45□□□□□ -0.58
ZNF550-203ENST00000376230 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.45□□□□□ -0.58
ZNF550-203ENST00000376230 NFIXQ14938 502 aa11.45□□□□□ -0.58
ZNF550-203ENST00000376230 INF2Q27J81 1249 aa11.45□□□□□ -0.58
ZNF550-203ENST00000376230 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.45□□□□□ -0.58
ZNF550-203ENST00000376230 DPF2Q92785 391 aa11.45□□□□□ -0.58
ZNF550-203ENST00000376230 ERO1AQ96HE7 468 aa11.45□□□□□ -0.58
ZNF550-203ENST00000376230 ZSCAN10Q96SZ4 725 aaPredicted RBP11.45□□□□□ -0.58
ZNF550-203ENST00000376230 PLEKHA4Q9H4M7 779 aa11.45□□□□□ -0.58
ZNF550-203ENST00000376230 LY9Q9HBG7 655 aa11.45□□□□□ -0.58
ZNF550-203ENST00000376230 ZCCHC17Q9NP64 241 aaKnown RBP11.45□□□□□ -0.58
ZNF550-203ENST00000376230 TBC1D7Q9P0N9 293 aa11.45□□□□□ -0.58
ZNF550-203ENST00000376230 PUF60Q9UHX1 559 aaKnown RBP11.45□□□□□ -0.58
ZNF550-203ENST00000376230 CTNND2Q9UQB3 1225 aa11.45□□□□□ -0.58
ZNF550-203ENST00000376230 ELP1O95163 1332 aa11.45□□□□□ -0.58
ZNF550-203ENST00000376230 GYS2P54840 703 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 MYL5Q02045 173 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 SMARCC2Q8TAQ2 1214 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 RTEL1Q9NZ71 1219 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 KDM4FA0A1W2PPD8 638 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 PP2D1A8MPX8 630 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 DEXIO95424 95 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 STAT6P42226 847 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 PTGDRQ13258 359 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 MFSD14BQ5SR56 506 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 LINC00116Q8NCU8 138 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 TAB2Q9NYJ8 693 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 SEC63Q9UGP8 760 aaKnown RBP11.44□□□□□ -0.58
ZNF550-203ENST00000376230 SLIT1O75093 1534 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 ECM2O94769 699 aaPredicted RBP11.44□□□□□ -0.58
ZNF550-203ENST00000376230 CSF1RP07333 972 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 SNAP25P60880 206 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 FAM193AP78312 1265 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 ARID5AQ03989 594 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 BMS1Q14692 1282 aaKnown RBP11.44□□□□□ -0.58
ZNF550-203ENST00000376230 TERF2Q15554 542 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 USP17L2Q6R6M4 530 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 AEBP2Q6ZN18 517 aaPredicted RBP11.44□□□□□ -0.58
ZNF550-203ENST00000376230 DYMQ7RTS9 669 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 TIGD1Q96MW7 591 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 CPDO75976 1380 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 FER1L4A9Z1Z3 1794 aa11.44□□□□□ -0.58
ZNF550-203ENST00000376230 NEMFO60524 1076 aa11.43□□□□□ -0.58
ZNF550-203ENST00000376230 BAG3O95817 575 aa11.43□□□□□ -0.58
ZNF550-203ENST00000376230 PDIA4P13667 645 aaKnown RBP11.43□□□□□ -0.58
ZNF550-203ENST00000376230 VEGFAP15692 232 aaPredicted RBP11.43□□□□□ -0.58
ZNF550-203ENST00000376230 TXKP42681 527 aa11.43□□□□□ -0.58
ZNF550-203ENST00000376230 SLC39A14Q15043 492 aa11.43□□□□□ -0.58
ZNF550-203ENST00000376230 IQCB1Q15051 598 aa11.43□□□□□ -0.58
ZNF550-203ENST00000376230 POSTNQ15063 836 aa11.43□□□□□ -0.58
ZNF550-203ENST00000376230 KIAA0825Q8IV33 1275 aa11.43□□□□□ -0.58
ZNF550-203ENST00000376230 MMRN2Q9H8L6 949 aa11.43□□□□□ -0.58
ZNF550-203ENST00000376230 BIN2Q9UBW5 565 aaPredicted RBP11.43□□□□□ -0.58
ZNF550-203ENST00000376230 CEP131Q9UPN4 1083 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms