RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 SPECC1LQ69YQ0 1117 aa16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 CCDC82Q8N4S0 544 aa16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 KIFC2Q96AC6 838 aa16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 SEC31BQ9NQW1 1179 aa16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 SPEF2Q9C093 1822 aa16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 A0A0U1RQJ8 604 aa16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 STX10O60499 249 aa16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 POSTNQ15063 836 aa16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 POTEAQ6S8J7 498 aa16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 FAM196AQ6ZSG2 479 aa16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 ATRIPQ8WXE1 791 aa16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 SMARCE1Q969G3 411 aa16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 MRPL44Q9H9J2 332 aaKnown RBP16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 TPM1P09493 284 aa16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 ZNF18P17022 549 aa16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 ATP2B1P20020 1258 aa16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 TRIM28Q13263 835 aaKnown RBP16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 SMC1AQ14683 1233 aaKnown RBP16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 TMEM67Q5HYA8 995 aa16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 METTL24Q5JXM2 366 aa16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 RSRC2Q7L4I2 434 aaKnown RBP16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 GPR161Q8N6U8 529 aaKnown RBP16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 UBXN6Q9BZV1 441 aa16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 LY9Q9HBG7 655 aa16.14■□□□□ 0.17
CLCNKA-202ENST00000375692 BRWD3Q6RI45 1802 aa16.13■□□□□ 0.17
CLCNKA-202ENST00000375692 ERVV-1B6SEH8 477 aa16.13■□□□□ 0.17
CLCNKA-202ENST00000375692 IFIT5Q13325 482 aaKnown RBP16.13■□□□□ 0.17
CLCNKA-202ENST00000375692 USP49Q70CQ1 688 aa16.13■□□□□ 0.17
CLCNKA-202ENST00000375692 CREBRFQ8IUR6 639 aa16.13■□□□□ 0.17
CLCNKA-202ENST00000375692 CMTR1Q8N1G2 835 aaKnown RBP16.13■□□□□ 0.17
CLCNKA-202ENST00000375692 BBXQ8WY36 941 aaPredicted RBP16.13■□□□□ 0.17
CLCNKA-202ENST00000375692 ZNF532Q9HCE3 1301 aa16.13■□□□□ 0.17
CLCNKA-202ENST00000375692 GNPATO15228 680 aa16.13■□□□□ 0.17
CLCNKA-202ENST00000375692 NOSTRINQ8IVI9 506 aa16.13■□□□□ 0.17
CLCNKA-202ENST00000375692 SOWAHDA6NJG2 315 aa16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 RXRBP28702 533 aa16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 CTDSPL2Q05D32 466 aa16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 SSRP1Q08945 709 aaKnown RBP16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 ZNF34Q8IZ26 560 aa16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 CCDC12Q8WUD4 166 aaPredicted RBP16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 LZTFL1Q9NQ48 299 aa16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 SRP68Q9UHB9 627 aaKnown RBP16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 TRMT112Q9UI30 125 aaKnown RBP16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 TACC3Q9Y6A5 838 aa16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 TEX33O43247 280 aa16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 MYO1BO43795 1136 aa16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 CAPN2P17655 700 aa16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 SUSD4Q5VX71 490 aa16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 ZBTB38Q8NAP3 1195 aaPredicted RBP16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 FBXO41Q8TF61 875 aa16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 CPLX3Q8WVH0 158 aa16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 ARFGAP3Q9NP61 516 aa16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 ZSWIM5Q9P217 1185 aa16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 FBXO2Q9UK22 296 aaPredicted RBP16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 WWC3Q9ULE0 1092 aa16.12■□□□□ 0.17
CLCNKA-202ENST00000375692 SBF2Q86WG5 1849 aa16.11■□□□□ 0.17
CLCNKA-202ENST00000375692 IFIT3O14879 490 aaKnown RBP16.11■□□□□ 0.17
CLCNKA-202ENST00000375692 GTF2E1P29083 439 aaPredicted RBP16.11■□□□□ 0.17
CLCNKA-202ENST00000375692 NR5A1Q13285 461 aa16.11■□□□□ 0.17
CLCNKA-202ENST00000375692 LDHAL6AQ6ZMR3 332 aa16.11■□□□□ 0.17
CLCNKA-202ENST00000375692 DIS3L2Q8IYB7 885 aaKnown RBP16.11■□□□□ 0.17
CLCNKA-202ENST00000375692 FUT8Q9BYC5 575 aa16.11■□□□□ 0.17
CLCNKA-202ENST00000375692 PCDHB6Q9Y5E3 794 aa16.11■□□□□ 0.17
CLCNKA-202ENST00000375692 SLC12A7Q9Y666 1083 aa16.11■□□□□ 0.17
CLCNKA-202ENST00000375692 DDX60Q8IY21 1712 aaKnown RBP16.11■□□□□ 0.17
CLCNKA-202ENST00000375692 NHSQ6T4R5 1651 aa16.11■□□□□ 0.17
CLCNKA-202ENST00000375692 GOLGA6L9A6NEM1 432 aa16.11■□□□□ 0.17
CLCNKA-202ENST00000375692 PCCAP05165 728 aaPredicted RBP16.11■□□□□ 0.17
CLCNKA-202ENST00000375692 MORC3Q14149 939 aa16.11■□□□□ 0.17
CLCNKA-202ENST00000375692 BICDL1Q6ZP65 573 aa16.11■□□□□ 0.17
CLCNKA-202ENST00000375692 ENOX1Q8TC92 643 aaKnown RBP16.11■□□□□ 0.17
CLCNKA-202ENST00000375692 ZKSCAN3Q9BRR0 538 aa16.11■□□□□ 0.17
CLCNKA-202ENST00000375692 RAI14Q9P0K7 980 aa16.11■□□□□ 0.17
CLCNKA-202ENST00000375692 RIPOR2Q9Y4F9 1068 aa16.11■□□□□ 0.17
CLCNKA-202ENST00000375692 ATP8B1O43520 1251 aa16.1■□□□□ 0.17
CLCNKA-202ENST00000375692 SARSP49591 514 aaKnown RBP16.1■□□□□ 0.17
CLCNKA-202ENST00000375692 NR1I3Q14994 352 aa16.1■□□□□ 0.17
CLCNKA-202ENST00000375692 PROM2Q8N271 834 aa16.1■□□□□ 0.17
CLCNKA-202ENST00000375692 MLKLQ8NB16 471 aa16.1■□□□□ 0.17
CLCNKA-202ENST00000375692 TMEM87BQ96K49 555 aa16.1■□□□□ 0.17
CLCNKA-202ENST00000375692 PUF60Q9UHX1 559 aaKnown RBP16.1■□□□□ 0.17
CLCNKA-202ENST00000375692 PDE6AP16499 860 aa16.1■□□□□ 0.17
CLCNKA-202ENST00000375692 PTPREP23469 700 aa16.1■□□□□ 0.17
CLCNKA-202ENST00000375692 STX17P56962 302 aa16.1■□□□□ 0.17
CLCNKA-202ENST00000375692 RABGGTAQ92696 567 aa16.1■□□□□ 0.17
CLCNKA-202ENST00000375692 GREM2Q9H772 168 aa16.1■□□□□ 0.17
CLCNKA-202ENST00000375692 HOOK1Q9UJC3 728 aaKnown RBP16.1■□□□□ 0.17
CLCNKA-202ENST00000375692 NIP7Q9Y221 180 aaKnown RBP eCLIP16.1■□□□□ 0.17
CLCNKA-202ENST00000375692 FMNL1O95466 1100 aaPredicted RBP16.09■□□□□ 0.17
CLCNKA-202ENST00000375692 MMP1P03956 469 aa16.09■□□□□ 0.17
CLCNKA-202ENST00000375692 CSF1RP07333 972 aa16.09■□□□□ 0.17
CLCNKA-202ENST00000375692 CASP1P29466 404 aa16.09■□□□□ 0.17
CLCNKA-202ENST00000375692 PHKA1P46020 1223 aa16.09■□□□□ 0.17
CLCNKA-202ENST00000375692 RRP12Q5JTH9 1297 aaKnown RBP16.09■□□□□ 0.17
CLCNKA-202ENST00000375692 KLHL10Q6JEL2 608 aa16.09■□□□□ 0.17
CLCNKA-202ENST00000375692 RAD9BQ6WBX8 426 aa16.09■□□□□ 0.17
CLCNKA-202ENST00000375692 SGMS1Q86VZ5 419 aa16.09■□□□□ 0.17
CLCNKA-202ENST00000375692 RGS22Q8NE09 1264 aa16.09■□□□□ 0.17
CLCNKA-202ENST00000375692 GOLGA1Q92805 767 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms