RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 IL25Q9H293 177 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 SOWAHDA6NJG2 315 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 OPA1O60313 960 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 SASH1O94885 1247 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 DCAF17Q5H9S7 520 aaPredicted RBP7.36□□□□□ -1.23
SMC1A-202ENST00000375340 SPECC1LQ69YQ0 1117 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 GPKOWQ92917 476 aaPredicted RBP eCLIP7.36□□□□□ -1.231e-6■□□□□ 10.4
SMC1A-202ENST00000375340 TTC14Q96N46 770 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 AIFM3Q96NN9 605 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 NOSTRINQ8IVI9 506 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 ATRIPQ8WXE1 791 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 GPCPD1Q9NPB8 672 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 PPP1R1BQ9UD71 204 aaPredicted RBP7.36□□□□□ -1.23
SMC1A-202ENST00000375340 ADGRB2O60241 1585 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 ARHGAP6O43182 974 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 TBCAO75347 108 aaKnown RBP7.36□□□□□ -1.23
SMC1A-202ENST00000375340 UTP14CQ5TAP6 766 aaKnown RBP7.36□□□□□ -1.23
SMC1A-202ENST00000375340 TOGARAM2Q6ZUX3 1019 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 PAIP2Q9BPZ3 127 aaKnown RBP7.36□□□□□ -1.23
SMC1A-202ENST00000375340 TTF2Q9UNY4 1162 aaKnown RBP7.36□□□□□ -1.23
SMC1A-202ENST00000375340 PLCD1P51178 756 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 SMC1AQ14683 1233 aaKnown RBP7.36□□□□□ -1.23
SMC1A-202ENST00000375340 SYMPKQ92797 1274 aaKnown RBP7.36□□□□□ -1.23
SMC1A-202ENST00000375340 SCLT1Q96NL6 688 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 RASSF4Q9H2L5 321 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 GJC1P36383 396 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 PDE11AQ9HCR9 933 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 CRB1P82279 1406 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 PARP1P09874 1014 aaKnown RBP7.35□□□□□ -1.23
SMC1A-202ENST00000375340 BCAMP50895 628 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 RBL2Q08999 1139 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 NECTIN1Q15223 517 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 TYW1BQ6NUM6 668 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 CSRNP2Q9H175 543 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 RTEL1Q9NZ71 1219 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 COL3A1P02461 1466 aaPredicted RBP7.35□□□□□ -1.23
SMC1A-202ENST00000375340 PNPLA6Q8IY17 1366 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 RAD51AP2Q09MP3 1159 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 DIP2CQ9Y2E4 1556 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 RAPGEF1Q13905 1077 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 EPHA10Q5JZY3 1008 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 ZMYM1Q5SVZ6 1142 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 PUS7LQ9H0K6 701 aaKnown RBP7.35□□□□□ -1.23
SMC1A-202ENST00000375340 C6orf50Q9HD87 102 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 GCOM1H8Y6P7 765 aaPredicted RBP7.35□□□□□ -1.23
SMC1A-202ENST00000375340 MYZAPP0CAP1 466 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 DDIT3P35638 169 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 PLA2G4DQ86XP0 818 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 SH3TC1Q8TE82 1336 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 GSTTP1A0A1W2PQM5 241 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 FBXO38Q6PIJ6 1188 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 MAN1B1Q9UKM7 699 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 ANKRD26Q9UPS8 1709 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 CMA1P23946 247 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 MSL1Q68DK7 614 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 DYMQ7RTS9 669 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 MLKLQ8NB16 471 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 TBX22Q9Y458 520 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 LMTK2Q8IWU2 1503 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 DLC1Q96QB1 1528 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 RIMBP2O15034 1052 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 KIF20AO95235 890 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 CHGBP05060 677 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 SETDB2Q96T68 719 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 INCENPQ9NQS7 918 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 ZNF804AQ7Z570 1209 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 CSGALNACT2Q8N6G5 542 aa7.35□□□□□ -1.23
SMC1A-202ENST00000375340 SECISBP2LQ93073 1101 aaKnown RBP7.35□□□□□ -1.23
SMC1A-202ENST00000375340 GYS2P54840 703 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 SAMM50Q9Y512 469 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 PDE8AO60658 829 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 ZSCAN10Q96SZ4 725 aaPredicted RBP7.34□□□□□ -1.23
SMC1A-202ENST00000375340 GREM2Q9H772 168 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 BTG4Q9NY30 223 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 GOLGA6CA6NDK9 693 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 GOLGA6DP0CG33 693 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 ATP1A3P13637 1013 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 DNAJC10Q8IXB1 793 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 GPR161Q8N6U8 529 aaKnown RBP7.34□□□□□ -1.23
SMC1A-202ENST00000375340 TBC1D5Q92609 795 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 GOLGA6AQ9NYA3 693 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 ATP10DQ9P241 1426 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 ZMYND10O75800 440 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 CYP2E1P05181 493 aaPredicted RBP7.34□□□□□ -1.23
SMC1A-202ENST00000375340 RFC4P35249 363 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 ACRBPQ8NEB7 543 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 PKD2L1Q9P0L9 805 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 ENC1O14682 589 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 CALML3P27482 149 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 AKNAD1Q5T1N1 836 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 SV2BQ7L1I2 683 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 IFNL3Q8IZI9 196 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 ZNF654Q8IZM8 581 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 BIN2Q9UBW5 565 aaPredicted RBP7.34□□□□□ -1.23
SMC1A-202ENST00000375340 NRXN1Q9ULB1 1477 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 BTBD18B2RXH4 712 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 TMEM232C9JQI7 657 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 PDE6AP16499 860 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 TXKP42681 527 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 SPAG5Q96R06 1193 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms