RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 CCNA1P78396 465 aa11.72□□□□□ -0.53
HLA-DOA-202ENST00000374813 ATP2B2Q01814 1243 aa11.72□□□□□ -0.53
HLA-DOA-202ENST00000374813 SNX17Q15036 470 aa11.72□□□□□ -0.53
HLA-DOA-202ENST00000374813 Q3C1V9 767 aa11.72□□□□□ -0.53
HLA-DOA-202ENST00000374813 TIFAQ96CG3 184 aa11.72□□□□□ -0.53
HLA-DOA-202ENST00000374813 FAM163AQ96GL9 167 aaPredicted RBP11.72□□□□□ -0.53
HLA-DOA-202ENST00000374813 WDR18Q9BV38 432 aa11.72□□□□□ -0.53
HLA-DOA-202ENST00000374813 TXNRD2Q9NNW7 524 aa11.72□□□□□ -0.53
HLA-DOA-202ENST00000374813 PDLIM7Q9NR12 457 aa11.72□□□□□ -0.53
HLA-DOA-202ENST00000374813 RBPJLQ9UBG7 517 aa11.72□□□□□ -0.53
HLA-DOA-202ENST00000374813 FRMPD3Q5JV73 1810 aa11.72□□□□□ -0.53
HLA-DOA-202ENST00000374813 TRIM43BA6NCK2 446 aa11.71□□□□□ -0.53
HLA-DOA-202ENST00000374813 SEMA3EO15041 775 aa11.71□□□□□ -0.53
HLA-DOA-202ENST00000374813 PICALMQ13492 652 aa11.71□□□□□ -0.53
HLA-DOA-202ENST00000374813 GJC2Q5T442 439 aaPredicted RBP11.71□□□□□ -0.53
HLA-DOA-202ENST00000374813 TRIM43Q96BQ3 446 aaPredicted RBP11.71□□□□□ -0.53
HLA-DOA-202ENST00000374813 SUCLG2Q96I99 432 aa11.71□□□□□ -0.53
HLA-DOA-202ENST00000374813 SRCIN1Q9C0H9 1055 aa11.71□□□□□ -0.53
HLA-DOA-202ENST00000374813 PORCNQ9H237 461 aa11.71□□□□□ -0.53
HLA-DOA-202ENST00000374813 DENND2AQ9ULE3 1009 aa11.71□□□□□ -0.53
HLA-DOA-202ENST00000374813 CHD9Q3L8U1 2897 aa11.71□□□□□ -0.54
HLA-DOA-202ENST00000374813 GAKO14976 1311 aa11.7□□□□□ -0.54
HLA-DOA-202ENST00000374813 SLC15A5A6NIM6 579 aa11.7□□□□□ -0.54
HLA-DOA-202ENST00000374813 MAP4K4O95819 1239 aaPredicted RBP11.7□□□□□ -0.54
HLA-DOA-202ENST00000374813 SLURP2P0DP57 97 aa11.7□□□□□ -0.54
HLA-DOA-202ENST00000374813 AAK1Q2M2I8 961 aa11.7□□□□□ -0.54
HLA-DOA-202ENST00000374813 RABL6Q3YEC7 729 aaPredicted RBP11.7□□□□□ -0.54
HLA-DOA-202ENST00000374813 TRIM60Q495X7 471 aa11.7□□□□□ -0.54
HLA-DOA-202ENST00000374813 POTEEQ6S8J3 1075 aa11.7□□□□□ -0.54
HLA-DOA-202ENST00000374813 KAZALD1Q96I82 304 aa11.7□□□□□ -0.54
HLA-DOA-202ENST00000374813 DDX4Q9NQI0 724 aaKnown RBP11.7□□□□□ -0.54
HLA-DOA-202ENST00000374813 TCF20Q9UGU0 1960 aaKnown RBP11.7□□□□□ -0.54
HLA-DOA-202ENST00000374813 REV3LO60673 3130 aa11.7□□□□□ -0.54
HLA-DOA-202ENST00000374813 VAMP4O75379 141 aa11.69□□□□□ -0.54
HLA-DOA-202ENST00000374813 ASNSP08243 561 aa11.69□□□□□ -0.54
HLA-DOA-202ENST00000374813 HOXC6P09630 235 aa11.69□□□□□ -0.54
HLA-DOA-202ENST00000374813 RAG1P15918 1043 aa11.69□□□□□ -0.54
HLA-DOA-202ENST00000374813 FPGSQ05932 587 aa11.69□□□□□ -0.54
HLA-DOA-202ENST00000374813 MTMR2Q13614 643 aa11.69□□□□□ -0.54
HLA-DOA-202ENST00000374813 SPTY2D1Q68D10 685 aaPredicted RBP11.69□□□□□ -0.54
HLA-DOA-202ENST00000374813 SLC4A10Q6U841 1118 aa11.69□□□□□ -0.54
HLA-DOA-202ENST00000374813 SH3RF1Q7Z6J0 888 aa11.69□□□□□ -0.54
HLA-DOA-202ENST00000374813 DZIP1Q86YF9 867 aaKnown RBP11.69□□□□□ -0.54
HLA-DOA-202ENST00000374813 PAGR1Q9BTK6 254 aa11.69□□□□□ -0.54
HLA-DOA-202ENST00000374813 LRFN3Q9BTN0 628 aa11.69□□□□□ -0.54
HLA-DOA-202ENST00000374813 BICC1Q9H694 974 aaKnown RBP11.69□□□□□ -0.54
HLA-DOA-202ENST00000374813 FLRT1Q9NZU1 646 aa11.69□□□□□ -0.54
HLA-DOA-202ENST00000374813 HERC5Q9UII4 1024 aaKnown RBP11.69□□□□□ -0.54
HLA-DOA-202ENST00000374813 RABGAP1Q9Y3P9 1069 aa11.69□□□□□ -0.54
HLA-DOA-202ENST00000374813 IVNS1ABPQ9Y6Y0 642 aa11.69□□□□□ -0.54
HLA-DOA-202ENST00000374813 RFX7Q2KHR2 1363 aa11.68□□□□□ -0.54
HLA-DOA-202ENST00000374813 CHD7Q9P2D1 2997 aa11.68□□□□□ -0.54
HLA-DOA-202ENST00000374813 USP17L10C9JJH3 530 aa11.68□□□□□ -0.54
HLA-DOA-202ENST00000374813 PEX10O60683 326 aa11.68□□□□□ -0.54
HLA-DOA-202ENST00000374813 CLTBP09497 229 aa11.68□□□□□ -0.54
HLA-DOA-202ENST00000374813 NBPF7P0C2Y1 421 aaPredicted RBP11.68□□□□□ -0.54
HLA-DOA-202ENST00000374813 TLE2Q04725 743 aa11.68□□□□□ -0.54
HLA-DOA-202ENST00000374813 CCDC27Q2M243 656 aa11.68□□□□□ -0.54
HLA-DOA-202ENST00000374813 TMEM31Q5JXX7 168 aa11.68□□□□□ -0.54
HLA-DOA-202ENST00000374813 GINM1Q9NU53 330 aa11.68□□□□□ -0.54
HLA-DOA-202ENST00000374813 CXXC1Q9P0U4 656 aaPredicted RBP11.68□□□□□ -0.54
HLA-DOA-202ENST00000374813 IL16Q14005 1332 aa11.67□□□□□ -0.54
HLA-DOA-202ENST00000374813 KIAA0355O15063 1070 aa11.67□□□□□ -0.54
HLA-DOA-202ENST00000374813 ZBTB22O15209 634 aa11.67□□□□□ -0.54
HLA-DOA-202ENST00000374813 SEPT4O43236 478 aa11.67□□□□□ -0.54
HLA-DOA-202ENST00000374813 BMP1P13497 986 aa11.67□□□□□ -0.54
HLA-DOA-202ENST00000374813 IGFBP4P22692 258 aa11.67□□□□□ -0.54
HLA-DOA-202ENST00000374813 PTPREP23469 700 aa11.67□□□□□ -0.54
HLA-DOA-202ENST00000374813 CYP2C19P33261 490 aa11.67□□□□□ -0.54
HLA-DOA-202ENST00000374813 ADCYAP1R1P41586 468 aa11.67□□□□□ -0.54
HLA-DOA-202ENST00000374813 BTDP43251 543 aa11.67□□□□□ -0.54
HLA-DOA-202ENST00000374813 CCDC85BQ15834 202 aaPredicted RBP11.67□□□□□ -0.54
HLA-DOA-202ENST00000374813 WDR78Q5VTH9 848 aa11.67□□□□□ -0.54
HLA-DOA-202ENST00000374813 CCDC174Q6PII3 467 aa11.67□□□□□ -0.54
HLA-DOA-202ENST00000374813 CCDC129Q6ZRS4 1044 aa11.67□□□□□ -0.54
HLA-DOA-202ENST00000374813 PRDM12Q9H4Q4 367 aa11.67□□□□□ -0.54
HLA-DOA-202ENST00000374813 ATAD5Q96QE3 1844 aa11.67□□□□□ -0.54
HLA-DOA-202ENST00000374813 GPR75-ASB3A0A0A6YYF3 556 aa11.66□□□□□ -0.54
HLA-DOA-202ENST00000374813 FAM196BA6NMK8 535 aa11.66□□□□□ -0.54
HLA-DOA-202ENST00000374813 EYA2O00167 538 aa11.66□□□□□ -0.54
HLA-DOA-202ENST00000374813 MYCNP04198 464 aaPredicted RBP11.66□□□□□ -0.54
HLA-DOA-202ENST00000374813 CYBAP13498 195 aa11.66□□□□□ -0.54
HLA-DOA-202ENST00000374813 EPHB4P54760 987 aa11.66□□□□□ -0.54
HLA-DOA-202ENST00000374813 ALYREFQ86V81 257 aaKnown RBP11.66□□□□□ -0.54
HLA-DOA-202ENST00000374813 WWC1Q8IX03 1113 aa11.66□□□□□ -0.54
HLA-DOA-202ENST00000374813 KLHDC4Q8TBB5 520 aa11.66□□□□□ -0.54
HLA-DOA-202ENST00000374813 SNX27Q96L92 541 aa11.66□□□□□ -0.54
HLA-DOA-202ENST00000374813 PI4KBQ9UBF8 816 aa11.66□□□□□ -0.54
HLA-DOA-202ENST00000374813 ABCF2Q9UG63 623 aa11.66□□□□□ -0.54
HLA-DOA-202ENST00000374813 STRNO43815 780 aa11.65□□□□□ -0.54
HLA-DOA-202ENST00000374813 LDHCP07864 332 aa11.65□□□□□ -0.54
HLA-DOA-202ENST00000374813 ITGB8P26012 769 aa11.65□□□□□ -0.54
HLA-DOA-202ENST00000374813 GRB14Q14449 540 aa11.65□□□□□ -0.54
HLA-DOA-202ENST00000374813 LRRC41Q15345 812 aa11.65□□□□□ -0.54
HLA-DOA-202ENST00000374813 OLFML2BQ68BL8 750 aa11.65□□□□□ -0.54
HLA-DOA-202ENST00000374813 DPP9Q86TI2 863 aa11.65□□□□□ -0.54
HLA-DOA-202ENST00000374813 ANKRD44Q8N8A2 993 aa11.65□□□□□ -0.54
HLA-DOA-202ENST00000374813 TRPV1Q8NER1 839 aa11.65□□□□□ -0.54
HLA-DOA-202ENST00000374813 FERMT2Q96AC1 680 aa11.65□□□□□ -0.54
HLA-DOA-202ENST00000374813 TOX2Q96NM4 488 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms