RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 DDAH1O94760 285 aa19.63■□□□□ 0.73
PTPN20-203ENST00000374342 TRIM29Q14134 588 aa19.63■□□□□ 0.73
PTPN20-203ENST00000374342 AOC3Q16853 763 aa19.63■□□□□ 0.73
PTPN20-203ENST00000374342 CCDC183Q5T5S1 534 aa19.63■□□□□ 0.73
PTPN20-203ENST00000374342 KRT40Q6A162 431 aa19.63■□□□□ 0.73
PTPN20-203ENST00000374342 CCDC82Q8N4S0 544 aa19.63■□□□□ 0.73
PTPN20-203ENST00000374342 KCNQ5Q9NR82 932 aa19.63■□□□□ 0.73
PTPN20-203ENST00000374342 GOLGA6L4A6NEF3 574 aa19.63■□□□□ 0.73
PTPN20-203ENST00000374342 XRCC6P12956 609 aaKnown RBP eCLIP19.63■□□□□ 0.73
PTPN20-203ENST00000374342 TFAP4Q01664 338 aa19.63■□□□□ 0.73
PTPN20-203ENST00000374342 KIF23Q02241 960 aaPredicted RBP19.63■□□□□ 0.73
PTPN20-203ENST00000374342 C7orf43Q8WVR3 580 aa19.63■□□□□ 0.73
PTPN20-203ENST00000374342 WASF1Q92558 559 aa19.63■□□□□ 0.73
PTPN20-203ENST00000374342 USP28Q96RU2 1077 aa19.63■□□□□ 0.73
PTPN20-203ENST00000374342 C21orf2O43822 256 aa19.62■□□□□ 0.73
PTPN20-203ENST00000374342 CALM1P0DP23 149 aa19.62■□□□□ 0.73
PTPN20-203ENST00000374342 CALM2P0DP24 149 aa19.62■□□□□ 0.73
PTPN20-203ENST00000374342 CALM3P0DP25 149 aa19.62■□□□□ 0.73
PTPN20-203ENST00000374342 PICALMQ13492 652 aa19.62■□□□□ 0.73
PTPN20-203ENST00000374342 LRSAM1Q6UWE0 723 aa19.62■□□□□ 0.73
PTPN20-203ENST00000374342 BRAPQ7Z569 592 aa19.62■□□□□ 0.73
PTPN20-203ENST00000374342 NBPF11Q86T75 865 aa19.62■□□□□ 0.73
PTPN20-203ENST00000374342 TSPY3P0CV98 308 aa19.61■□□□□ 0.73
PTPN20-203ENST00000374342 TSPY8P0CW00 308 aa19.61■□□□□ 0.73
PTPN20-203ENST00000374342 ATL3Q6DD88 541 aa19.61■□□□□ 0.73
PTPN20-203ENST00000374342 RGS22Q8NE09 1264 aa19.61■□□□□ 0.73
PTPN20-203ENST00000374342 GUCY1A2P33402 732 aa19.61■□□□□ 0.73
PTPN20-203ENST00000374342 TROAPQ12815 778 aa19.61■□□□□ 0.73
PTPN20-203ENST00000374342 GNL2Q13823 731 aaKnown RBP19.61■□□□□ 0.73
PTPN20-203ENST00000374342 PPP2R5BQ15173 497 aa19.61■□□□□ 0.73
PTPN20-203ENST00000374342 CC2D2BQ6DHV5 1058 aa19.61■□□□□ 0.73
PTPN20-203ENST00000374342 CRACR2BQ8N4Y2 399 aaPredicted RBP19.61■□□□□ 0.73
PTPN20-203ENST00000374342 SLC16A10Q8TF71 515 aa19.61■□□□□ 0.73
PTPN20-203ENST00000374342 TEKT1Q969V4 418 aa19.61■□□□□ 0.73
PTPN20-203ENST00000374342 RBM28Q9NW13 759 aaKnown RBP19.61■□□□□ 0.73
PTPN20-203ENST00000374342 PLEKHA8P1O95397 391 aa19.6■□□□□ 0.73
PTPN20-203ENST00000374342 DEXIO95424 95 aa19.6■□□□□ 0.73
PTPN20-203ENST00000374342 RASA1P20936 1047 aa19.6■□□□□ 0.73
PTPN20-203ENST00000374342 NT5C2P49902 561 aa19.6■□□□□ 0.73
PTPN20-203ENST00000374342 C16orf86Q6ZW13 317 aa19.6■□□□□ 0.73
PTPN20-203ENST00000374342 SUPT20HQ8NEM7 779 aa19.6■□□□□ 0.73
PTPN20-203ENST00000374342 BICD2Q8TD16 824 aa19.6■□□□□ 0.73
PTPN20-203ENST00000374342 PGBD1Q96JS3 809 aa19.6■□□□□ 0.73
PTPN20-203ENST00000374342 PANK2Q9BZ23 570 aa19.6■□□□□ 0.73
PTPN20-203ENST00000374342 ZNF287Q9HBT7 754 aa19.6■□□□□ 0.73
PTPN20-203ENST00000374342 KIAA2012Q0VF49 1180 aa19.59■□□□□ 0.73
PTPN20-203ENST00000374342 STRIP1Q5VSL9 837 aa19.59■□□□□ 0.73
PTPN20-203ENST00000374342 MYSM1Q5VVJ2 828 aa19.59■□□□□ 0.73
PTPN20-203ENST00000374342 RCSD1Q6JBY9 416 aa19.59■□□□□ 0.73
PTPN20-203ENST00000374342 HHIPL2Q6UWX4 724 aa19.59■□□□□ 0.73
PTPN20-203ENST00000374342 KIAA0825Q8IV33 1275 aa19.59■□□□□ 0.73
PTPN20-203ENST00000374342 ZNF444Q8N0Y2 327 aaPredicted RBP19.59■□□□□ 0.73
PTPN20-203ENST00000374342 TTLL6Q8N841 843 aa19.59■□□□□ 0.73
PTPN20-203ENST00000374342 KAT14Q9H8E8 782 aa19.59■□□□□ 0.73
PTPN20-203ENST00000374342 PPIP5K2O43314 1243 aa19.59■□□□□ 0.73
PTPN20-203ENST00000374342 LIG1P18858 919 aa19.59■□□□□ 0.73
PTPN20-203ENST00000374342 CDK8P49336 464 aa19.59■□□□□ 0.73
PTPN20-203ENST00000374342 DACT2Q5SW24 774 aa19.59■□□□□ 0.73
PTPN20-203ENST00000374342 CTCFLQ8NI51 663 aaPredicted RBP19.59■□□□□ 0.73
PTPN20-203ENST00000374342 RNF26Q9BY78 433 aaPredicted RBP19.59■□□□□ 0.73
PTPN20-203ENST00000374342 IL17RBQ9NRM6 502 aa19.59■□□□□ 0.73
PTPN20-203ENST00000374342 USP40Q9NVE5 1235 aa19.59■□□□□ 0.73
PTPN20-203ENST00000374342 USP17L3A6NCW0 530 aa19.58■□□□□ 0.72
PTPN20-203ENST00000374342 USP17L4A6NCW7 530 aa19.58■□□□□ 0.72
PTPN20-203ENST00000374342 DPEP1P16444 411 aa19.58■□□□□ 0.72
PTPN20-203ENST00000374342 CRKP46108 304 aa19.58■□□□□ 0.72
PTPN20-203ENST00000374342 AKAP17AQ02040 695 aaKnown RBP19.58■□□□□ 0.72
PTPN20-203ENST00000374342 USP17L1Q7RTZ2 530 aa19.58■□□□□ 0.72
PTPN20-203ENST00000374342 DDX4Q9NQI0 724 aaKnown RBP19.58■□□□□ 0.72
PTPN20-203ENST00000374342 RCOR1Q9UKL0 485 aa19.58■□□□□ 0.72
PTPN20-203ENST00000374342 WDHD1O75717 1129 aaPredicted RBP19.57■□□□□ 0.72
PTPN20-203ENST00000374342 CCDC93Q567U6 631 aa19.57■□□□□ 0.72
PTPN20-203ENST00000374342 TMTC3Q6ZXV5 915 aa19.57■□□□□ 0.72
PTPN20-203ENST00000374342 CNTNAP5Q8WYK1 1306 aa19.57■□□□□ 0.72
PTPN20-203ENST00000374342 FKBP1AP62942 108 aaKnown RBP19.57■□□□□ 0.72
PTPN20-203ENST00000374342 CCDC178Q5BJE1 867 aa19.57■□□□□ 0.72
PTPN20-203ENST00000374342 CDC42EP5Q6NZY7 148 aa19.57■□□□□ 0.72
PTPN20-203ENST00000374342 RTEL1Q9NZ71 1219 aa19.57■□□□□ 0.72
PTPN20-203ENST00000374342 SIPA1L1O43166 1804 aa19.56■□□□□ 0.72
PTPN20-203ENST00000374342 ZBTB7AO95365 584 aa19.56■□□□□ 0.72
PTPN20-203ENST00000374342 FUT2Q10981 343 aa19.56■□□□□ 0.72
PTPN20-203ENST00000374342 DGKHQ86XP1 1220 aa19.56■□□□□ 0.72
PTPN20-203ENST00000374342 PNMA1Q8ND90 353 aa19.56■□□□□ 0.72
PTPN20-203ENST00000374342 TSPY26PQ9H489 355 aa19.56■□□□□ 0.72
PTPN20-203ENST00000374342 KCNJ14Q9UNX9 436 aa19.56■□□□□ 0.72
PTPN20-203ENST00000374342 CLIC4Q9Y696 253 aa19.56■□□□□ 0.72
PTPN20-203ENST00000374342 BRCA1P38398 1863 aaKnown RBP19.56■□□□□ 0.72
PTPN20-203ENST00000374342 MMP1P03956 469 aa19.55■□□□□ 0.72
PTPN20-203ENST00000374342 ME1P48163 572 aa19.55■□□□□ 0.72
PTPN20-203ENST00000374342 STK38Q15208 465 aa19.55■□□□□ 0.72
PTPN20-203ENST00000374342 APOBEC3HQ6NTF7 200 aaKnown RBP19.55■□□□□ 0.72
PTPN20-203ENST00000374342 RBSNQ9H1K0 784 aa19.55■□□□□ 0.72
PTPN20-203ENST00000374342 TCP11L1Q9NUJ3 509 aa19.55■□□□□ 0.72
PTPN20-203ENST00000374342 hCG_1642624A0A1W2PR95 340 aa19.55■□□□□ 0.72
PTPN20-203ENST00000374342 LETM1O95202 739 aaPredicted RBP19.55■□□□□ 0.72
PTPN20-203ENST00000374342 RBM5P52756 815 aaKnown RBP eCLIP19.55■□□□□ 0.72
PTPN20-203ENST00000374342 SAFBQ15424 915 aaKnown RBP eCLIP19.55■□□□□ 0.72
PTPN20-203ENST00000374342 POLR3EQ9NVU0 708 aa19.55■□□□□ 0.72
PTPN20-203ENST00000374342 STX8Q9UNK0 236 aa19.55■□□□□ 0.72
PTPN20-203ENST00000374342 PCDHAC2Q9Y5I4 1007 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms