RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 AFG3L2Q9Y4W6 797 aa14.41□□□□□ -0.1
HDAC8-201ENST00000373554 A0A0G2JLL6 359 aaPredicted RBP14.4□□□□□ -0.1
HDAC8-201ENST00000373554 BTBD19C9JJ37 291 aa14.4□□□□□ -0.1
HDAC8-201ENST00000373554 USP17L12C9JPN9 530 aa14.4□□□□□ -0.1
HDAC8-201ENST00000373554 USP17L21D6R901 530 aa14.4□□□□□ -0.1
HDAC8-201ENST00000373554 APPP05067 770 aa14.4□□□□□ -0.1
HDAC8-201ENST00000373554 CYP2D6P10635 497 aa14.4□□□□□ -0.1
HDAC8-201ENST00000373554 TDO2P48775 406 aa14.4□□□□□ -0.1
HDAC8-201ENST00000373554 CRHR2Q13324 411 aa14.4□□□□□ -0.1
HDAC8-201ENST00000373554 TAF1CQ15572 869 aaPredicted RBP14.4□□□□□ -0.1
HDAC8-201ENST00000373554 CERKLQ49MI3 558 aaPredicted RBP14.4□□□□□ -0.1
HDAC8-201ENST00000373554 NOM1Q5C9Z4 860 aaKnown RBP14.4□□□□□ -0.1
HDAC8-201ENST00000373554 FASTKD5Q7L8L6 764 aaKnown RBP14.4□□□□□ -0.1
HDAC8-201ENST00000373554 PRRT2Q7Z6L0 340 aaPredicted RBP14.4□□□□□ -0.1
HDAC8-201ENST00000373554 ZNF280CQ8ND82 737 aa14.4□□□□□ -0.1
HDAC8-201ENST00000373554 SEC62Q99442 399 aaKnown RBP14.4□□□□□ -0.1
HDAC8-201ENST00000373554 NACAP1Q9BZK3 213 aa14.4□□□□□ -0.1
HDAC8-201ENST00000373554 PHIPQ8WWQ0 1821 aa14.39□□□□□ -0.11
HDAC8-201ENST00000373554 GSG1L2A8MUP6 293 aa14.39□□□□□ -0.11
HDAC8-201ENST00000373554 GPR25O00155 361 aa14.39□□□□□ -0.11
HDAC8-201ENST00000373554 GH2P01242 217 aa14.39□□□□□ -0.11
HDAC8-201ENST00000373554 SHMT1P34896 483 aa14.39□□□□□ -0.11
HDAC8-201ENST00000373554 GABPAQ06546 454 aa14.39□□□□□ -0.11
HDAC8-201ENST00000373554 SPP2Q13103 211 aa14.39□□□□□ -0.11
HDAC8-201ENST00000373554 ABCB5Q2M3G0 1257 aa14.39□□□□□ -0.11
HDAC8-201ENST00000373554 C12orf60Q5U649 245 aa14.39□□□□□ -0.11
HDAC8-201ENST00000373554 ANKRD23Q86SG2 305 aa14.39□□□□□ -0.11
HDAC8-201ENST00000373554 ZFYVE28Q9HCC9 887 aa14.39□□□□□ -0.11
HDAC8-201ENST00000373554 CABP5Q9NP86 173 aa14.39□□□□□ -0.11
HDAC8-201ENST00000373554 BAZ2AQ9UIF9 1905 aaKnown RBP14.39□□□□□ -0.11
HDAC8-201ENST00000373554 CYP2D7A0A087X1C5 515 aa14.38□□□□□ -0.11
HDAC8-201ENST00000373554 PDHXO00330 501 aa14.38□□□□□ -0.11
HDAC8-201ENST00000373554 PDE4AP27815 886 aa14.38□□□□□ -0.11
HDAC8-201ENST00000373554 EVX2Q03828 476 aa14.38□□□□□ -0.11
HDAC8-201ENST00000373554 CTR9Q6PD62 1173 aa14.38□□□□□ -0.11
HDAC8-201ENST00000373554 GADL1Q6ZQY3 521 aa14.38□□□□□ -0.11
HDAC8-201ENST00000373554 CENPQQ7L2Z9 268 aaPredicted RBP14.38□□□□□ -0.11
HDAC8-201ENST00000373554 ZNF296Q8WUU4 475 aaPredicted RBP14.38□□□□□ -0.11
HDAC8-201ENST00000373554 WDR18Q9BV38 432 aa14.38□□□□□ -0.11
HDAC8-201ENST00000373554 HELLSQ9NRZ9 838 aa14.38□□□□□ -0.11
HDAC8-201ENST00000373554 PATL2C9JE40 543 aaKnown RBP14.37□□□□□ -0.11
HDAC8-201ENST00000373554 FKTNO75072 461 aa14.37□□□□□ -0.11
HDAC8-201ENST00000373554 JAG1P78504 1218 aa14.37□□□□□ -0.11
HDAC8-201ENST00000373554 MOGSQ13724 837 aa14.37□□□□□ -0.11
HDAC8-201ENST00000373554 RAB3GAP1Q15042 981 aa14.37□□□□□ -0.11
HDAC8-201ENST00000373554 SHROOM1Q2M3G4 852 aaPredicted RBP14.37□□□□□ -0.11
HDAC8-201ENST00000373554 SBK1Q52WX2 424 aa14.37□□□□□ -0.11
HDAC8-201ENST00000373554 PROCA1Q8NCQ7 364 aaPredicted RBP14.37□□□□□ -0.11
HDAC8-201ENST00000373554 SLC44A5Q8NCS7 719 aa14.37□□□□□ -0.11
HDAC8-201ENST00000373554 DYNLL2Q96FJ2 89 aa14.37□□□□□ -0.11
HDAC8-201ENST00000373554 PARK7Q99497 189 aaKnown RBP14.37□□□□□ -0.11
HDAC8-201ENST00000373554 NAPBQ9H115 298 aa14.37□□□□□ -0.11
HDAC8-201ENST00000373554 R3HDMLQ9H3Y0 253 aa14.37□□□□□ -0.11
HDAC8-201ENST00000373554 EPB41L4AQ9HCS5 686 aaPredicted RBP14.37□□□□□ -0.11
HDAC8-201ENST00000373554 PTPRFP10586 1907 aa14.37□□□□□ -0.11
HDAC8-201ENST00000373554 ROBO3Q96MS0 1386 aa14.36□□□□□ -0.11
HDAC8-201ENST00000373554 A0A0D9SFI3 127 aa14.36□□□□□ -0.11
HDAC8-201ENST00000373554 MINDY4BA8MYZ0 360 aa14.36□□□□□ -0.11
HDAC8-201ENST00000373554 HIP1O00291 1037 aa14.36□□□□□ -0.11
HDAC8-201ENST00000373554 MPHOSPH10O00566 681 aaKnown RBP14.36□□□□□ -0.11
HDAC8-201ENST00000373554 HMGCS2P54868 508 aa14.36□□□□□ -0.11
HDAC8-201ENST00000373554 MTMR2Q13614 643 aa14.36□□□□□ -0.11
HDAC8-201ENST00000373554 MCMDC2Q4G0Z9 681 aa14.36□□□□□ -0.11
HDAC8-201ENST00000373554 TTC22Q5TAA0 569 aa14.36□□□□□ -0.11
HDAC8-201ENST00000373554 CCDC129Q6ZRS4 1044 aa14.36□□□□□ -0.11
HDAC8-201ENST00000373554 C16orf86Q6ZW13 317 aa14.36□□□□□ -0.11
HDAC8-201ENST00000373554 IFNL3Q8IZI9 196 aa14.36□□□□□ -0.11
HDAC8-201ENST00000373554 FAM227BQ96M60 508 aa14.36□□□□□ -0.11
HDAC8-201ENST00000373554 FEZ1Q99689 392 aa14.36□□□□□ -0.11
HDAC8-201ENST00000373554 DIAPH3Q9NSV4 1193 aa14.36□□□□□ -0.11
HDAC8-201ENST00000373554 TMOD4Q9NZQ9 345 aa14.36□□□□□ -0.11
HDAC8-201ENST00000373554 AGTPBP1Q9UPW5 1226 aa14.36□□□□□ -0.11
HDAC8-201ENST00000373554 CASP8AP2Q9UKL3 1982 aa14.36□□□□□ -0.11
HDAC8-201ENST00000373554 MYH8P13535 1937 aa14.35□□□□□ -0.11
HDAC8-201ENST00000373554 LOC285556D6RIA3 1793 aa14.35□□□□□ -0.11
HDAC8-201ENST00000373554 C19orf81C9J6K1 198 aa14.35□□□□□ -0.11
HDAC8-201ENST00000373554 USP17L10C9JJH3 530 aa14.35□□□□□ -0.11
HDAC8-201ENST00000373554 TLR2O60603 784 aa14.35□□□□□ -0.11
HDAC8-201ENST00000373554 SDSP20132 328 aa14.35□□□□□ -0.11
HDAC8-201ENST00000373554 CDK8P49336 464 aa14.35□□□□□ -0.11
HDAC8-201ENST00000373554 MFAP1P55081 439 aaKnown RBP14.35□□□□□ -0.11
HDAC8-201ENST00000373554 BACE1P56817 501 aa14.35□□□□□ -0.11
HDAC8-201ENST00000373554 NMIQ13287 307 aaPredicted RBP14.35□□□□□ -0.11
HDAC8-201ENST00000373554 SH3D19Q5HYK7 790 aa14.35□□□□□ -0.11
HDAC8-201ENST00000373554 GPAT2Q6NUI2 795 aa14.35□□□□□ -0.11
HDAC8-201ENST00000373554 TMEM179Q6ZVK1 233 aa14.35□□□□□ -0.11
HDAC8-201ENST00000373554 CCDC136Q96JN2 1154 aa14.35□□□□□ -0.11
HDAC8-201ENST00000373554 CCDC17Q96LX7 622 aa14.35□□□□□ -0.11
HDAC8-201ENST00000373554 ZNF287Q9HBT7 754 aa14.35□□□□□ -0.11
HDAC8-201ENST00000373554 PNMA3Q9UL41 463 aa14.35□□□□□ -0.11
HDAC8-201ENST00000373554 SLC45A1Q9Y2W3 748 aa14.35□□□□□ -0.11
HDAC8-201ENST00000373554 SMIM22K7EJ46 135 aa14.34□□□□□ -0.11
HDAC8-201ENST00000373554 SLC3A2P08195 630 aaKnown RBP14.34□□□□□ -0.11
HDAC8-201ENST00000373554 GSPT1P15170 499 aaKnown RBP14.34□□□□□ -0.11
HDAC8-201ENST00000373554 SP3Q02447 781 aa14.34□□□□□ -0.11
HDAC8-201ENST00000373554 PABPC4Q13310 644 aaKnown RBP eCLIP14.34□□□□□ -0.11
HDAC8-201ENST00000373554 CTU1Q7Z7A3 348 aaKnown RBP14.34□□□□□ -0.11
HDAC8-201ENST00000373554 ERO1AQ96HE7 468 aa14.34□□□□□ -0.11
HDAC8-201ENST00000373554 CCDC171Q6TFL3 1326 aa14.34□□□□□ -0.11
HDAC8-201ENST00000373554 CYP2C8P10632 490 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms