RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 PTK2BQ14289 1009 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 PATL1Q86TB9 770 aaKnown RBP10.04□□□□□ -0.8
CSMD2-205ENST00000373381 NR1H4Q96RI1 486 aaPredicted RBP10.04□□□□□ -0.8
CSMD2-205ENST00000373381 MLXIPQ9HAP2 919 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 GNPATO15228 680 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 TRIM14Q14142 442 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 ASIC2Q16515 512 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 ANKRD20A3Q5VUR7 823 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 USP48Q86UV5 1035 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 AFAP1Q8N556 730 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 DEPTORQ8TB45 409 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 MICAL1Q8TDZ2 1067 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 AS3MTQ9HBK9 375 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 CCDC87Q9NVE4 849 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 FAM135AQ9P2D6 1515 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 SMARCA5O60264 1052 aaPredicted RBP10.04□□□□□ -0.8
CSMD2-205ENST00000373381 NLRX1Q86UT6 975 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 SULF1Q8IWU6 871 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 MRRFQ96E11 262 aaKnown RBP10.04□□□□□ -0.8
CSMD2-205ENST00000373381 GUCA1BQ9UMX6 200 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 CASP2P42575 452 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 WASHC5Q12768 1159 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 ELMOD1Q8N336 334 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 LRGUKQ96M69 825 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 IWS1Q96ST2 819 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 RIC8AQ9NPQ8 531 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 FNBP4Q8N3X1 1017 aaPredicted RBP10.04□□□□□ -0.8
CSMD2-205ENST00000373381 ST7Q9NRC1 585 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 MMEL1Q495T6 779 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 RINT1Q6NUQ1 792 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 TBC1D8O95759 1140 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 FAM71BQ8TC56 605 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 MRPS27Q92552 414 aaKnown RBP10.04□□□□□ -0.8
CSMD2-205ENST00000373381 CPSF3Q9UKF6 684 aaKnown RBP10.04□□□□□ -0.8
CSMD2-205ENST00000373381 PUM3Q15397 648 aaKnown RBP10.04□□□□□ -0.8
CSMD2-205ENST00000373381 DZIP3Q86Y13 1208 aaKnown RBP10.04□□□□□ -0.8
CSMD2-205ENST00000373381 SLITRK6Q9H5Y7 841 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 MRPL44Q9H9J2 332 aaKnown RBP10.04□□□□□ -0.8
CSMD2-205ENST00000373381 ATP6V1E2Q96A05 226 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 MMS19Q96T76 1030 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 BUB1BO60566 1050 aaPredicted RBP10.04□□□□□ -0.8
CSMD2-205ENST00000373381 DENND2CQ68D51 928 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 TFIP11Q9UBB9 837 aaKnown RBP10.04□□□□□ -0.8
CSMD2-205ENST00000373381 FLOT1O75955 427 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 TNNI1P19237 187 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 MCMDC2Q4G0Z9 681 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 CCDC138Q96M89 665 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 GGA1Q9UJY5 639 aa10.04□□□□□ -0.8
CSMD2-205ENST00000373381 IFRD2Q12894 506 aaPredicted RBP10.03□□□□□ -0.8
CSMD2-205ENST00000373381 NME8Q8N427 588 aa10.03□□□□□ -0.8
CSMD2-205ENST00000373381 SKIV2LQ15477 1246 aaKnown RBP10.03□□□□□ -0.8
CSMD2-205ENST00000373381 NDUFAF2Q8N183 169 aa10.03□□□□□ -0.8
CSMD2-205ENST00000373381 DNM3Q9UQ16 869 aa10.03□□□□□ -0.8
CSMD2-205ENST00000373381 ARHGEF16Q5VV41 709 aa10.03□□□□□ -0.8
CSMD2-205ENST00000373381 DCAF15Q66K64 600 aa10.03□□□□□ -0.8
CSMD2-205ENST00000373381 PPARGP37231 505 aaPredicted RBP10.03□□□□□ -0.8
CSMD2-205ENST00000373381 ELF1P32519 619 aa10.03□□□□□ -0.8
CSMD2-205ENST00000373381 MORC4Q8TE76 937 aa10.03□□□□□ -0.8
CSMD2-205ENST00000373381 C11orf95C9JLR9 678 aaPredicted RBP10.03□□□□□ -0.8
CSMD2-205ENST00000373381 CCDC122Q5T0U0 273 aa10.03□□□□□ -0.8
CSMD2-205ENST00000373381 ARHGEF1Q92888 912 aaKnown RBP10.03□□□□□ -0.8
CSMD2-205ENST00000373381 FGD4Q96M96 766 aa10.03□□□□□ -0.8
CSMD2-205ENST00000373381 NFKBIL1Q9UBC1 381 aaPredicted RBP10.03□□□□□ -0.8
CSMD2-205ENST00000373381 ZKSCAN5Q9Y2L8 839 aa10.03□□□□□ -0.8
CSMD2-205ENST00000373381 RTL1A6NKG5 1358 aa10.03□□□□□ -0.8
CSMD2-205ENST00000373381 C9orf84Q5VXU9 1444 aa10.03□□□□□ -0.8
CSMD2-205ENST00000373381 IL15P40933 162 aaPredicted RBP10.03□□□□□ -0.8
CSMD2-205ENST00000373381 RNF219Q5W0B1 726 aaPredicted RBP10.03□□□□□ -0.8
CSMD2-205ENST00000373381 IFT20Q8IY31 132 aa10.03□□□□□ -0.8
CSMD2-205ENST00000373381 EXOC4Q96A65 974 aa10.03□□□□□ -0.8
CSMD2-205ENST00000373381 TRERF1Q96PN7 1200 aa10.03□□□□□ -0.8
CSMD2-205ENST00000373381 ZNF212Q9UDV6 495 aa10.03□□□□□ -0.8
CSMD2-205ENST00000373381 A0A1B0GUA9 196 aa10.03□□□□□ -0.8
CSMD2-205ENST00000373381 GARSP41250 739 aaKnown RBP10.03□□□□□ -0.8
CSMD2-205ENST00000373381 LRRC43Q8N309 656 aa10.03□□□□□ -0.8
CSMD2-205ENST00000373381 ZC3H15Q8WU90 426 aaKnown RBP10.03□□□□□ -0.8
CSMD2-205ENST00000373381 METTL23Q86XA0 190 aa10.02□□□□□ -0.8
CSMD2-205ENST00000373381 TEX11Q8IYF3 940 aa10.02□□□□□ -0.8
CSMD2-205ENST00000373381 EVI5O60447 810 aa10.02□□□□□ -0.8
CSMD2-205ENST00000373381 RUFY4Q6ZNE9 571 aa10.02□□□□□ -0.8
CSMD2-205ENST00000373381 GIMAP4Q9NUV9 329 aa10.02□□□□□ -0.8
CSMD2-205ENST00000373381 CCNA1P78396 465 aa10.02□□□□□ -0.81
CSMD2-205ENST00000373381 DMP1Q13316 513 aaPredicted RBP10.02□□□□□ -0.81
CSMD2-205ENST00000373381 DENND2AQ9ULE3 1009 aa10.02□□□□□ -0.81
CSMD2-205ENST00000373381 TROVE2P10155 538 aaKnown RBP eCLIP10.02□□□□□ -0.81
CSMD2-205ENST00000373381 SLC1A4P43007 532 aa10.02□□□□□ -0.81
CSMD2-205ENST00000373381 FAM160A1Q05DH4 1040 aa10.02□□□□□ -0.81
CSMD2-205ENST00000373381 PPP2R5AQ15172 486 aa10.02□□□□□ -0.81
CSMD2-205ENST00000373381 SYTL2Q9HCH5 934 aa10.02□□□□□ -0.81
CSMD2-205ENST00000373381 PARP2Q9UGN5 583 aa10.02□□□□□ -0.81
CSMD2-205ENST00000373381 USTQ9Y2C2 406 aa10.02□□□□□ -0.81
CSMD2-205ENST00000373381 NSD3Q9BZ95 1437 aa10.02□□□□□ -0.81
CSMD2-205ENST00000373381 UVSSAQ2YD98 709 aa10.02□□□□□ -0.81
CSMD2-205ENST00000373381 RSRC2Q7L4I2 434 aaKnown RBP10.02□□□□□ -0.81
CSMD2-205ENST00000373381 CCDC105Q8IYK2 499 aa10.02□□□□□ -0.81
CSMD2-205ENST00000373381 GCNT3O95395 438 aa10.02□□□□□ -0.81
CSMD2-205ENST00000373381 NPR1P16066 1061 aa10.02□□□□□ -0.81
CSMD2-205ENST00000373381 CHST3Q7LGC8 479 aa10.02□□□□□ -0.81
CSMD2-205ENST00000373381 MICALL1Q8N3F8 863 aa10.02□□□□□ -0.81
CSMD2-205ENST00000373381 GPCPD1Q9NPB8 672 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms