RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 ACSBG1Q96GR2 724 aa13.68□□□□□ -0.22
NCDN-202ENST00000373243 IRX2Q9BZI1 471 aaPredicted RBP13.68□□□□□ -0.22
NCDN-202ENST00000373243 ZHX3Q9H4I2 956 aa13.68□□□□□ -0.22
NCDN-202ENST00000373243 RNF41Q9H4P4 317 aaPredicted RBP13.68□□□□□ -0.22
NCDN-202ENST00000373243 SENP2Q9HC62 589 aa13.68□□□□□ -0.22
NCDN-202ENST00000373243 UQCRFS1P1P0C7P4 283 aa13.68□□□□□ -0.22
NCDN-202ENST00000373243 NOSTRINQ8IVI9 506 aa13.68□□□□□ -0.22
NCDN-202ENST00000373243 TAB2Q9NYJ8 693 aa13.68□□□□□ -0.22
NCDN-202ENST00000373243 ASAP1Q9ULH1 1129 aa13.68□□□□□ -0.22
NCDN-202ENST00000373243 CTNND2Q9UQB3 1225 aa13.68□□□□□ -0.22
NCDN-202ENST00000373243 RIMS1Q86UR5 1692 aaKnown RBP13.68□□□□□ -0.22
NCDN-202ENST00000373243 IL2RBP14784 551 aa13.68□□□□□ -0.22
NCDN-202ENST00000373243 RDXP35241 583 aaKnown RBP13.68□□□□□ -0.22
NCDN-202ENST00000373243 RFX5P48382 616 aaPredicted RBP13.68□□□□□ -0.22
NCDN-202ENST00000373243 TTC19Q6DKK2 380 aaPredicted RBP13.68□□□□□ -0.22
NCDN-202ENST00000373243 GBP6Q6ZN66 633 aa13.68□□□□□ -0.22
NCDN-202ENST00000373243 DLG5Q8TDM6 1919 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 ZNF335Q9H4Z2 1342 aaPredicted RBP13.67□□□□□ -0.22
NCDN-202ENST00000373243 PSDA5PKW4 1024 aaPredicted RBP13.67□□□□□ -0.22
NCDN-202ENST00000373243 H7C1W4 665 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 H2AFXP16104 143 aaPredicted RBP13.67□□□□□ -0.22
NCDN-202ENST00000373243 STIM1Q13586 685 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 CYB5R4Q7L1T6 521 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 DZIP3Q86Y13 1208 aaKnown RBP13.67□□□□□ -0.22
NCDN-202ENST00000373243 SLF1Q9BQI6 1058 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 CENPHQ9H3R5 247 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 CTAGE15A4D2H0 777 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 TSPY2A6NKD2 308 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 ADAMTS2O95450 1211 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 CTAGE8P0CG41 777 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 CDC27P30260 824 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 CDC25AP30304 524 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 PDE6BP35913 854 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 CHMP4BP1P59074 171 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 CTAGE6Q86UF2 777 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 TBC1D10CQ8IV04 446 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 CTAGE4Q8IX94 777 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 ESR2Q92731 530 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 TMEM87BQ96K49 555 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 JADE2Q9NQC1 790 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 CTAGE9A4FU28 777 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 FOXO4P98177 505 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 ATP2B2Q01814 1243 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 RILPL1Q5EBL4 403 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 KANK3Q6NY19 840 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 ENGASEQ8NFI3 743 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 TRIM47Q96LD4 638 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 CRACR2AQ9BSW2 395 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 ZSWIM5Q9P217 1185 aa13.67□□□□□ -0.22
NCDN-202ENST00000373243 UBA7P41226 1012 aa13.66□□□□□ -0.22
NCDN-202ENST00000373243 MCAMP43121 646 aa13.66□□□□□ -0.22
NCDN-202ENST00000373243 UBXN1Q04323 297 aa13.66□□□□□ -0.22
NCDN-202ENST00000373243 IFNL3Q8IZI9 196 aa13.66□□□□□ -0.22
NCDN-202ENST00000373243 CCDC24Q8N4L8 307 aa13.66□□□□□ -0.22
NCDN-202ENST00000373243 JPH2Q9BR39 696 aaPredicted RBP13.66□□□□□ -0.22
NCDN-202ENST00000373243 TECPR2O15040 1411 aa13.66□□□□□ -0.22
NCDN-202ENST00000373243 ZMYM6O95789 1325 aa13.66□□□□□ -0.22
NCDN-202ENST00000373243 AMOTL1Q8IY63 956 aa13.66□□□□□ -0.22
NCDN-202ENST00000373243 CCDC148Q8NFR7 591 aa13.66□□□□□ -0.22
NCDN-202ENST00000373243 CNNM2Q9H8M5 875 aa13.66□□□□□ -0.22
NCDN-202ENST00000373243 PIH1D3Q9NQM4 214 aaKnown RBP13.66□□□□□ -0.22
NCDN-202ENST00000373243 STX8Q9UNK0 236 aa13.66□□□□□ -0.22
NCDN-202ENST00000373243 PCDHB6Q9Y5E3 794 aa13.66□□□□□ -0.22
NCDN-202ENST00000373243 USP8P40818 1118 aa13.66□□□□□ -0.22
NCDN-202ENST00000373243 BCAMP50895 628 aa13.66□□□□□ -0.22
NCDN-202ENST00000373243 GRIPAP1Q4V328 841 aa13.66□□□□□ -0.22
NCDN-202ENST00000373243 CCDC181Q5TID7 509 aa13.66□□□□□ -0.22
NCDN-202ENST00000373243 SHC4Q6S5L8 630 aa13.66□□□□□ -0.22
NCDN-202ENST00000373243 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.66□□□□□ -0.22
NCDN-202ENST00000373243 PLEKHG2Q9H7P9 1386 aa13.65□□□□□ -0.22
NCDN-202ENST00000373243 CCDC194A0A1B0GVG4 234 aa13.65□□□□□ -0.22
NCDN-202ENST00000373243 SOWAHDA6NJG2 315 aa13.65□□□□□ -0.22
NCDN-202ENST00000373243 TRIM21P19474 475 aaKnown RBP13.65□□□□□ -0.22
NCDN-202ENST00000373243 MTIF2P46199 727 aaKnown RBP13.65□□□□□ -0.22
NCDN-202ENST00000373243 PIK3AP1Q6ZUJ8 805 aa13.65□□□□□ -0.22
NCDN-202ENST00000373243 MLKLQ8NB16 471 aa13.65□□□□□ -0.22
NCDN-202ENST00000373243 ATG3Q9NT62 314 aa13.65□□□□□ -0.22
NCDN-202ENST00000373243 IDEP14735 1019 aa13.65□□□□□ -0.22
NCDN-202ENST00000373243 USP5P45974 858 aa13.65□□□□□ -0.22
NCDN-202ENST00000373243 MTF1Q14872 753 aa13.65□□□□□ -0.22
NCDN-202ENST00000373243 AKNAD1Q5T1N1 836 aa13.65□□□□□ -0.22
NCDN-202ENST00000373243 CDK5RAP3Q96JB5 506 aa13.65□□□□□ -0.22
NCDN-202ENST00000373243 MED4Q9NPJ6 270 aa13.65□□□□□ -0.22
NCDN-202ENST00000373243 FAM53CQ9NYF3 392 aa13.65□□□□□ -0.22
NCDN-202ENST00000373243 KRT9P35527 623 aa13.65□□□□□ -0.23
NCDN-202ENST00000373243 TOGARAM2Q6ZUX3 1019 aa13.65□□□□□ -0.23
NCDN-202ENST00000373243 SPATA5Q8NB90 893 aa13.65□□□□□ -0.23
NCDN-202ENST00000373243 PSMB7Q99436 277 aa13.65□□□□□ -0.23
NCDN-202ENST00000373243 CSRNP2Q9H175 543 aa13.65□□□□□ -0.23
NCDN-202ENST00000373243 MKNK2Q9HBH9 465 aa13.65□□□□□ -0.23
NCDN-202ENST00000373243 SYNRGQ9UMZ2 1314 aa13.64□□□□□ -0.23
NCDN-202ENST00000373243 FRMD3A2A2Y4 597 aa13.64□□□□□ -0.23
NCDN-202ENST00000373243 ERLIN2O94905 339 aa13.64□□□□□ -0.23
NCDN-202ENST00000373243 CLSTN1O94985 981 aa13.64□□□□□ -0.23
NCDN-202ENST00000373243 EXOC4Q96A65 974 aa13.64□□□□□ -0.23
NCDN-202ENST00000373243 EPSTI1Q96J88 318 aa13.64□□□□□ -0.23
NCDN-202ENST00000373243 STAT6P42226 847 aa13.64□□□□□ -0.23
NCDN-202ENST00000373243 SSR1P43307 286 aaKnown RBP13.64□□□□□ -0.23
NCDN-202ENST00000373243 CCDC178Q5BJE1 867 aa13.64□□□□□ -0.23
NCDN-202ENST00000373243 CAVIN4Q5BKX8 364 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms