RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 AFDNP55196 1824 aaKnown RBP13.6□□□□□ -0.23
SNX21-205ENST00000372547 RNF40O75150 1001 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 A1BGP04217 495 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 PHKG2P15735 406 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 CD44P16070 742 aaKnown RBP13.6□□□□□ -0.23
SNX21-205ENST00000372547 CABP4P57796 275 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 CTDSPL2Q05D32 466 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 MSANTD4Q8NCY6 345 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 NUP133Q8WUM0 1156 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 HDAC6Q9UBN7 1215 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 RAB21Q9UL25 225 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 PLEKHG2Q9H7P9 1386 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 MFAP3LO75121 409 aa13.59□□□□□ -0.23
SNX21-205ENST00000372547 CPDO75976 1380 aa13.59□□□□□ -0.23
SNX21-205ENST00000372547 ZFYP08048 801 aaPredicted RBP13.59□□□□□ -0.23
SNX21-205ENST00000372547 TATP17735 454 aaPredicted RBP13.59□□□□□ -0.23
SNX21-205ENST00000372547 GSPT2Q8IYD1 628 aaKnown RBP13.59□□□□□ -0.23
SNX21-205ENST00000372547 EPSTI1Q96J88 318 aa13.59□□□□□ -0.23
SNX21-205ENST00000372547 FBXO2Q9UK22 296 aaPredicted RBP13.59□□□□□ -0.23
SNX21-205ENST00000372547 N4BP3O15049 544 aa13.59□□□□□ -0.23
SNX21-205ENST00000372547 SRGAP2O75044 1071 aa13.59□□□□□ -0.23
SNX21-205ENST00000372547 USP5P45974 858 aa13.59□□□□□ -0.23
SNX21-205ENST00000372547 FAM71BQ8TC56 605 aa13.59□□□□□ -0.23
SNX21-205ENST00000372547 OXER1Q8TDS5 423 aa13.59□□□□□ -0.23
SNX21-205ENST00000372547 ACBD3Q9H3P7 528 aa13.59□□□□□ -0.23
SNX21-205ENST00000372547 GPR108Q9NPR9 543 aa13.59□□□□□ -0.23
SNX21-205ENST00000372547 NFAT5O94916 1531 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 FAM237AA0A1B0GTK4 181 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 hCG_1642624A0A1W2PR95 340 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 GYPCP04921 128 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 MAGEA9P43362 315 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 ICE2Q659A1 982 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 PROSER2Q86WR7 435 aaPredicted RBP13.58□□□□□ -0.24
SNX21-205ENST00000372547 GBP3Q9H0R5 595 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 MYO6Q9UM54 1294 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 CTNND2Q9UQB3 1225 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 MAPK8IP1Q9UQF2 711 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 JRKLQ9Y4A0 524 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 C5P01031 1676 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 NBPF26B4DH59 902 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 ERVK-24P63145 666 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 SART3Q15020 963 aaKnown RBP13.58□□□□□ -0.24
SNX21-205ENST00000372547 NTRK3Q16288 839 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 NBPF14Q5TI25 921 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 NBPF10Q6P3W6 841 aaKnown RBP13.58□□□□□ -0.24
SNX21-205ENST00000372547 RASGRP2Q7LDG7 609 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 NBPF15Q8N660 670 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 IQUBQ8NA54 791 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 CCDC148Q8NFR7 591 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 CABLES1Q8TDN4 633 aa13.58□□□□□ -0.24
SNX21-205ENST00000372547 FAM205CA6NFA0 338 aa13.57□□□□□ -0.24
SNX21-205ENST00000372547 PTPREP23469 700 aa13.57□□□□□ -0.24
SNX21-205ENST00000372547 PIP4K2BP78356 416 aa13.57□□□□□ -0.24
SNX21-205ENST00000372547 E2F4Q16254 413 aa13.57□□□□□ -0.24
SNX21-205ENST00000372547 SPATA1Q5VX52 437 aa13.57□□□□□ -0.24
SNX21-205ENST00000372547 MICALL1Q8N3F8 863 aa13.57□□□□□ -0.24
SNX21-205ENST00000372547 AFAP1L1Q8TED9 768 aa13.57□□□□□ -0.24
SNX21-205ENST00000372547 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNX21-205ENST00000372547 BLZF1Q9H2G9 400 aa13.57□□□□□ -0.24
SNX21-205ENST00000372547 FAM217BQ9NTX9 383 aaPredicted RBP13.57□□□□□ -0.24
SNX21-205ENST00000372547 TAB2Q9NYJ8 693 aa13.57□□□□□ -0.24
SNX21-205ENST00000372547 NWD2Q9ULI1 1742 aa13.57□□□□□ -0.24
SNX21-205ENST00000372547 KDM6AO15550 1401 aaPredicted RBP13.57□□□□□ -0.24
SNX21-205ENST00000372547 RNF225M0QZC1 329 aaPredicted RBP13.57□□□□□ -0.24
SNX21-205ENST00000372547 ACTN4O43707 911 aaKnown RBP13.57□□□□□ -0.24
SNX21-205ENST00000372547 SARSP49591 514 aaKnown RBP13.57□□□□□ -0.24
SNX21-205ENST00000372547 CNGA4Q8IV77 575 aa13.57□□□□□ -0.24
SNX21-205ENST00000372547 IFNL2Q8IZJ0 200 aa13.57□□□□□ -0.24
SNX21-205ENST00000372547 FAM89AQ96GI7 184 aa13.57□□□□□ -0.24
SNX21-205ENST00000372547 NAA15Q9BXJ9 866 aaKnown RBP13.57□□□□□ -0.24
SNX21-205ENST00000372547 LY9Q9HBG7 655 aa13.57□□□□□ -0.24
SNX21-205ENST00000372547 ADD3Q9UEY8 706 aaKnown RBP13.57□□□□□ -0.24
SNX21-205ENST00000372547 WWC3Q9ULE0 1092 aa13.57□□□□□ -0.24
SNX21-205ENST00000372547 TTF2Q9UNY4 1162 aaKnown RBP13.57□□□□□ -0.24
SNX21-205ENST00000372547 A0A087X0B3 334 aa13.56□□□□□ -0.24
SNX21-205ENST00000372547 MMP1P03956 469 aa13.56□□□□□ -0.24
SNX21-205ENST00000372547 TRIM22Q8IYM9 498 aa13.56□□□□□ -0.24
SNX21-205ENST00000372547 SMARCC1Q92922 1105 aaPredicted RBP13.56□□□□□ -0.24
SNX21-205ENST00000372547 ZSWIM5Q9P217 1185 aa13.56□□□□□ -0.24
SNX21-205ENST00000372547 MCAMP43121 646 aa13.56□□□□□ -0.24
SNX21-205ENST00000372547 METTL24Q5JXM2 366 aa13.56□□□□□ -0.24
SNX21-205ENST00000372547 CTR9Q6PD62 1173 aa13.56□□□□□ -0.24
SNX21-205ENST00000372547 APTXQ7Z2E3 356 aaKnown RBP13.56□□□□□ -0.24
SNX21-205ENST00000372547 IGDCC4Q8TDY8 1250 aa13.56□□□□□ -0.24
SNX21-205ENST00000372547 CHP1Q99653 195 aa13.56□□□□□ -0.24
SNX21-205ENST00000372547 MKRN1Q9UHC7 482 aaKnown RBP13.56□□□□□ -0.24
SNX21-205ENST00000372547 ZNF532Q9HCE3 1301 aa13.56□□□□□ -0.24
SNX21-205ENST00000372547 KRT9P35527 623 aa13.55□□□□□ -0.24
SNX21-205ENST00000372547 WHAMMP3Q1A5X7 153 aa13.55□□□□□ -0.24
SNX21-205ENST00000372547 TTC19Q6DKK2 380 aaPredicted RBP13.55□□□□□ -0.24
SNX21-205ENST00000372547 KRT28Q7Z3Y7 464 aa13.55□□□□□ -0.24
SNX21-205ENST00000372547 GPATCH11Q8N954 259 aa13.55□□□□□ -0.24
SNX21-205ENST00000372547 AIDAQ96BJ3 306 aa13.55□□□□□ -0.24
SNX21-205ENST00000372547 ERCC5P28715 1186 aaPredicted RBP13.55□□□□□ -0.24
SNX21-205ENST00000372547 RILPL1Q5EBL4 403 aa13.55□□□□□ -0.24
SNX21-205ENST00000372547 CAGE1Q8TC20 777 aa13.55□□□□□ -0.24
SNX21-205ENST00000372547 PPM1EQ8WY54 764 aa13.55□□□□□ -0.24
SNX21-205ENST00000372547 MYH8P13535 1937 aa13.55□□□□□ -0.24
SNX21-205ENST00000372547 MRPS25P82663 173 aaKnown RBP13.54□□□□□ -0.24
SNX21-205ENST00000372547 DNAJC21Q5F1R6 531 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms