RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 FANCBQ8NB91 859 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 LPIN2Q92539 896 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 HOOK1Q9UJC3 728 aaKnown RBP12.43□□□□□ -0.42
LRIF1-201ENST00000369763 KCNQ4P56696 695 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 BICDL1Q6ZP65 573 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 IGSF22Q8N9C0 903 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 VPS16Q9H269 839 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 BTG4Q9NY30 223 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 USP54Q70EL1 1684 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 ABCC6O95255 1503 aa12.42□□□□□ -0.42
LRIF1-201ENST00000369763 SLC5A1P13866 664 aa12.42□□□□□ -0.42
LRIF1-201ENST00000369763 DYNLL1P63167 89 aaKnown RBP12.42□□□□□ -0.42
LRIF1-201ENST00000369763 MDM2Q00987 491 aaPredicted RBP12.42□□□□□ -0.42
LRIF1-201ENST00000369763 CRACR2BQ8N4Y2 399 aaPredicted RBP12.42□□□□□ -0.42
LRIF1-201ENST00000369763 SYMPKQ92797 1274 aaKnown RBP12.42□□□□□ -0.42
LRIF1-201ENST00000369763 NACAP1Q9BZK3 213 aa12.42□□□□□ -0.42
LRIF1-201ENST00000369763 SUGCTQ9HAC7 445 aa12.42□□□□□ -0.42
LRIF1-201ENST00000369763 MST1RQ04912 1400 aa12.42□□□□□ -0.42
LRIF1-201ENST00000369763 PDE8AO60658 829 aa12.42□□□□□ -0.42
LRIF1-201ENST00000369763 RHOXF2BP0C7M4 288 aa12.42□□□□□ -0.42
LRIF1-201ENST00000369763 IFNAR1P17181 557 aa12.42□□□□□ -0.42
LRIF1-201ENST00000369763 PTPREP23469 700 aa12.42□□□□□ -0.42
LRIF1-201ENST00000369763 PPFIBP1Q86W92 1011 aa12.42□□□□□ -0.42
LRIF1-201ENST00000369763 ACRBPQ8NEB7 543 aa12.42□□□□□ -0.42
LRIF1-201ENST00000369763 RHOXF2Q9BQY4 288 aa12.42□□□□□ -0.42
LRIF1-201ENST00000369763 PARD6BQ9BYG5 372 aa12.42□□□□□ -0.42
LRIF1-201ENST00000369763 TFR2Q9UP52 801 aa12.42□□□□□ -0.42
LRIF1-201ENST00000369763 TNKSO95271 1327 aa12.42□□□□□ -0.42
LRIF1-201ENST00000369763 VEGFAP15692 232 aaPredicted RBP12.42□□□□□ -0.42
LRIF1-201ENST00000369763 CASP14P31944 242 aa12.42□□□□□ -0.42
LRIF1-201ENST00000369763 ZNF569Q5MCW4 686 aa12.42□□□□□ -0.42
LRIF1-201ENST00000369763 SUSD4Q5VX71 490 aa12.42□□□□□ -0.42
LRIF1-201ENST00000369763 SHISA4Q96DD7 197 aa12.42□□□□□ -0.42
LRIF1-201ENST00000369763 CDC5LQ99459 802 aaKnown RBP12.42□□□□□ -0.42
LRIF1-201ENST00000369763 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.42□□□□□ -0.42
LRIF1-201ENST00000369763 TNS3Q68CZ2 1445 aa12.42□□□□□ -0.42
LRIF1-201ENST00000369763 FAM47AQ5JRC9 791 aa12.41□□□□□ -0.42
LRIF1-201ENST00000369763 RAD9BQ6WBX8 426 aa12.41□□□□□ -0.42
LRIF1-201ENST00000369763 SGMS1Q86VZ5 419 aa12.41□□□□□ -0.42
LRIF1-201ENST00000369763 NWD2Q9ULI1 1742 aa12.41□□□□□ -0.42
LRIF1-201ENST00000369763 CTNND2Q9UQB3 1225 aa12.41□□□□□ -0.42
LRIF1-201ENST00000369763 PHLPP2Q6ZVD8 1323 aa12.41□□□□□ -0.42
LRIF1-201ENST00000369763 CCP110O43303 1012 aa12.41□□□□□ -0.42
LRIF1-201ENST00000369763 PHACTR2O75167 634 aa12.41□□□□□ -0.42
LRIF1-201ENST00000369763 KIF4BQ2VIQ3 1234 aa12.41□□□□□ -0.42
LRIF1-201ENST00000369763 RILPL1Q5EBL4 403 aa12.41□□□□□ -0.42
LRIF1-201ENST00000369763 NUTM2AQ8IVF1 878 aaPredicted RBP12.41□□□□□ -0.42
LRIF1-201ENST00000369763 RASSF8Q8NHQ8 419 aa12.41□□□□□ -0.42
LRIF1-201ENST00000369763 PODXL2Q9NZ53 605 aa12.41□□□□□ -0.42
LRIF1-201ENST00000369763 UQCRFS1P1P0C7P4 283 aa12.41□□□□□ -0.42
LRIF1-201ENST00000369763 OAS2P29728 719 aaKnown RBP12.41□□□□□ -0.42
LRIF1-201ENST00000369763 MCM7P33993 719 aa12.41□□□□□ -0.42
LRIF1-201ENST00000369763 KRT23Q9C075 422 aa12.41□□□□□ -0.42
LRIF1-201ENST00000369763 TRIM75PA6NK02 468 aa12.4□□□□□ -0.42
LRIF1-201ENST00000369763 ADAMTS3O15072 1205 aa12.4□□□□□ -0.42
LRIF1-201ENST00000369763 DEXIO95424 95 aa12.4□□□□□ -0.42
LRIF1-201ENST00000369763 LIFRP42702 1097 aa12.4□□□□□ -0.42
LRIF1-201ENST00000369763 PPARAQ07869 468 aa12.4□□□□□ -0.42
LRIF1-201ENST00000369763 WASF1Q92558 559 aa12.4□□□□□ -0.42
LRIF1-201ENST00000369763 AKR1B15C9JRZ8 316 aaPredicted RBP12.4□□□□□ -0.42
LRIF1-201ENST00000369763 ACTN4O43707 911 aaKnown RBP12.4□□□□□ -0.42
LRIF1-201ENST00000369763 TRIM28Q13263 835 aaKnown RBP12.4□□□□□ -0.42
LRIF1-201ENST00000369763 EFCAB8A8MWE9 144 aa12.39□□□□□ -0.43
LRIF1-201ENST00000369763 CYP19A1P11511 503 aaPredicted RBP12.39□□□□□ -0.43
LRIF1-201ENST00000369763 MORC3Q14149 939 aa12.39□□□□□ -0.43
LRIF1-201ENST00000369763 PIK3AP1Q6ZUJ8 805 aa12.39□□□□□ -0.43
LRIF1-201ENST00000369763 MLKLQ8NB16 471 aa12.39□□□□□ -0.43
LRIF1-201ENST00000369763 RASGRP4Q8TDF6 673 aa12.39□□□□□ -0.43
LRIF1-201ENST00000369763 CARD10Q9BWT7 1032 aa12.39□□□□□ -0.43
LRIF1-201ENST00000369763 TAB2Q9NYJ8 693 aa12.39□□□□□ -0.43
LRIF1-201ENST00000369763 SOS2Q07890 1332 aaPredicted RBP12.39□□□□□ -0.43
LRIF1-201ENST00000369763 CAMTA1Q9Y6Y1 1673 aa12.39□□□□□ -0.43
LRIF1-201ENST00000369763 ERCC3P19447 782 aa12.39□□□□□ -0.43
LRIF1-201ENST00000369763 DPYDQ12882 1025 aa12.39□□□□□ -0.43
LRIF1-201ENST00000369763 GDAP1L1Q96MZ0 367 aa12.39□□□□□ -0.43
LRIF1-201ENST00000369763 SYNRGQ9UMZ2 1314 aa12.39□□□□□ -0.43
LRIF1-201ENST00000369763 N4BP3O15049 544 aa12.39□□□□□ -0.43
LRIF1-201ENST00000369763 STX10O60499 249 aa12.39□□□□□ -0.43
LRIF1-201ENST00000369763 CCDC175P0C221 793 aa12.39□□□□□ -0.43
LRIF1-201ENST00000369763 ARID4AP29374 1257 aaPredicted RBP12.39□□□□□ -0.43
LRIF1-201ENST00000369763 FXR1P51114 621 aaKnown RBP eCLIP12.39□□□□□ -0.43
LRIF1-201ENST00000369763 IFIT1BQ5T764 474 aaKnown RBP12.39□□□□□ -0.43
LRIF1-201ENST00000369763 RRAGBQ5VZM2 374 aa12.39□□□□□ -0.43
LRIF1-201ENST00000369763 CC2D1AQ6P1N0 951 aaPredicted RBP12.39□□□□□ -0.43
LRIF1-201ENST00000369763 NUP88Q99567 741 aaPredicted RBP12.39□□□□□ -0.43
LRIF1-201ENST00000369763 CNNM2Q9H8M5 875 aa12.39□□□□□ -0.43
LRIF1-201ENST00000369763 KCND1Q9NSA2 647 aa12.39□□□□□ -0.43
LRIF1-201ENST00000369763 TBC1D8O95759 1140 aa12.38□□□□□ -0.43
LRIF1-201ENST00000369763 ZNF18P17022 549 aa12.38□□□□□ -0.43
LRIF1-201ENST00000369763 HNRNPH2P55795 449 aaKnown RBP12.38□□□□□ -0.43
LRIF1-201ENST00000369763 PTGDRQ13258 359 aa12.38□□□□□ -0.43
LRIF1-201ENST00000369763 SMC1AQ14683 1233 aaKnown RBP12.38□□□□□ -0.43
LRIF1-201ENST00000369763 ENOX1Q8TC92 643 aaKnown RBP12.38□□□□□ -0.43
LRIF1-201ENST00000369763 PAGE5Q96GU1 130 aa12.38□□□□□ -0.43
LRIF1-201ENST00000369763 PLA2G12BQ9BX93 195 aa12.38□□□□□ -0.43
LRIF1-201ENST00000369763 ARFGAP3Q9NP61 516 aa12.38□□□□□ -0.43
LRIF1-201ENST00000369763 FBXO3Q9UK99 471 aa12.38□□□□□ -0.43
LRIF1-201ENST00000369763 NIP7Q9Y221 180 aaKnown RBP eCLIP12.38□□□□□ -0.43
LRIF1-201ENST00000369763 RNF225M0QZC1 329 aaPredicted RBP12.38□□□□□ -0.43
LRIF1-201ENST00000369763 ENAHQ8N8S7 591 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms