RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 CHGBP05060 677 aa22.18■■□□□ 1.14
CHTOP-202ENST00000368687 NEFLP07196 543 aa22.18■■□□□ 1.14
CHTOP-202ENST00000368687 PLCD1P51178 756 aa22.18■■□□□ 1.14
CHTOP-202ENST00000368687 GABPAQ06546 454 aa22.18■■□□□ 1.14
CHTOP-202ENST00000368687 DGKZQ13574 1117 aa22.18■■□□□ 1.14
CHTOP-202ENST00000368687 SLC4A8Q2Y0W8 1093 aa22.18■■□□□ 1.14
CHTOP-202ENST00000368687 CERKLQ49MI3 558 aaPredicted RBP22.18■■□□□ 1.14
CHTOP-202ENST00000368687 WDR18Q9BV38 432 aa22.18■■□□□ 1.14
CHTOP-202ENST00000368687 SLC45A1Q9Y2W3 748 aa22.18■■□□□ 1.14
CHTOP-202ENST00000368687 BTBD19C9JJ37 291 aa22.17■■□□□ 1.14
CHTOP-202ENST00000368687 PRKAB2O43741 272 aa22.17■■□□□ 1.14
CHTOP-202ENST00000368687 SLURP2P0DP57 97 aa22.17■■□□□ 1.14
CHTOP-202ENST00000368687 TAF1CQ15572 869 aaPredicted RBP22.17■■□□□ 1.14
CHTOP-202ENST00000368687 SBK1Q52WX2 424 aa22.17■■□□□ 1.14
CHTOP-202ENST00000368687 PROCA1Q8NCQ7 364 aaPredicted RBP22.17■■□□□ 1.14
CHTOP-202ENST00000368687 CABP5Q9NP86 173 aa22.17■■□□□ 1.14
CHTOP-202ENST00000368687 HELLSQ9NRZ9 838 aa22.17■■□□□ 1.14
CHTOP-202ENST00000368687 ZBTB21Q9ULJ3 1066 aa22.17■■□□□ 1.14
CHTOP-202ENST00000368687 TRIM75PA6NK02 468 aa22.16■■□□□ 1.14
CHTOP-202ENST00000368687 GPR25O00155 361 aa22.16■■□□□ 1.14
CHTOP-202ENST00000368687 HIP1O00291 1037 aa22.16■■□□□ 1.14
CHTOP-202ENST00000368687 CRHR2Q13324 411 aa22.16■■□□□ 1.14
CHTOP-202ENST00000368687 C12orf60Q5U649 245 aa22.16■■□□□ 1.14
CHTOP-202ENST00000368687 ZNF287Q9HBT7 754 aa22.16■■□□□ 1.14
CHTOP-202ENST00000368687 LOC285556D6RIA3 1793 aa22.15■■□□□ 1.14
CHTOP-202ENST00000368687 GSG1L2A8MUP6 293 aa22.15■■□□□ 1.14
CHTOP-202ENST00000368687 PATL2C9JE40 543 aaKnown RBP22.15■■□□□ 1.14
CHTOP-202ENST00000368687 USP17L12C9JPN9 530 aa22.15■■□□□ 1.14
CHTOP-202ENST00000368687 USP17L21D6R901 530 aa22.15■■□□□ 1.14
CHTOP-202ENST00000368687 M0R2C6 588 aa22.15■■□□□ 1.14
CHTOP-202ENST00000368687 SHMT1P34896 483 aa22.15■■□□□ 1.14
CHTOP-202ENST00000368687 MFAP1P55081 439 aaKnown RBP22.15■■□□□ 1.14
CHTOP-202ENST00000368687 ABCB5Q2M3G0 1257 aa22.15■■□□□ 1.14
CHTOP-202ENST00000368687 CENPQQ7L2Z9 268 aaPredicted RBP22.15■■□□□ 1.14
CHTOP-202ENST00000368687 FAM43AQ8N2R8 423 aa22.15■■□□□ 1.14
CHTOP-202ENST00000368687 ZNF296Q8WUU4 475 aaPredicted RBP22.15■■□□□ 1.14
CHTOP-202ENST00000368687 RILPL2Q969X0 211 aa22.15■■□□□ 1.14
CHTOP-202ENST00000368687 PARK7Q99497 189 aaKnown RBP22.15■■□□□ 1.14
CHTOP-202ENST00000368687 C19orf81C9J6K1 198 aa22.14■■□□□ 1.13
CHTOP-202ENST00000368687 FKTNO75072 461 aa22.14■■□□□ 1.13
CHTOP-202ENST00000368687 APPP05067 770 aa22.14■■□□□ 1.13
CHTOP-202ENST00000368687 TDO2P48775 406 aa22.14■■□□□ 1.13
CHTOP-202ENST00000368687 SPP2Q13103 211 aa22.14■■□□□ 1.13
CHTOP-202ENST00000368687 PABPC4Q13310 644 aaKnown RBP eCLIP22.14■■□□□ 1.134e-7■■□□□ 12.7
CHTOP-202ENST00000368687 RRP1BQ14684 758 aaKnown RBP22.14■■□□□ 1.13
CHTOP-202ENST00000368687 CTR9Q6PD62 1173 aa22.14■■□□□ 1.13
CHTOP-202ENST00000368687 CCDC17Q96LX7 622 aa22.14■■□□□ 1.13
CHTOP-202ENST00000368687 PDHXO00330 501 aa22.13■■□□□ 1.13
CHTOP-202ENST00000368687 GDF11O95390 407 aa22.13■■□□□ 1.13
CHTOP-202ENST00000368687 GH2P01242 217 aa22.13■■□□□ 1.13
CHTOP-202ENST00000368687 MCMDC2Q4G0Z9 681 aa22.13■■□□□ 1.13
CHTOP-202ENST00000368687 C16orf86Q6ZW13 317 aa22.13■■□□□ 1.13
CHTOP-202ENST00000368687 PNMA3Q9UL41 463 aa22.13■■□□□ 1.13
CHTOP-202ENST00000368687 AGTPBP1Q9UPW5 1226 aa22.13■■□□□ 1.13
CHTOP-202ENST00000368687 ROBO3Q96MS0 1386 aa22.12■■□□□ 1.13
CHTOP-202ENST00000368687 USP17L10C9JJH3 530 aa22.12■■□□□ 1.13
CHTOP-202ENST00000368687 TLR2O60603 784 aa22.12■■□□□ 1.13
CHTOP-202ENST00000368687 BACE1P56817 501 aa22.12■■□□□ 1.13
CHTOP-202ENST00000368687 MOGSQ13724 837 aa22.12■■□□□ 1.13
CHTOP-202ENST00000368687 ARHGEF6Q15052 776 aa22.12■■□□□ 1.13
CHTOP-202ENST00000368687 SH3D19Q5HYK7 790 aa22.12■■□□□ 1.13
CHTOP-202ENST00000368687 GADL1Q6ZQY3 521 aa22.12■■□□□ 1.13
CHTOP-202ENST00000368687 TMEM179Q6ZVK1 233 aa22.12■■□□□ 1.13
CHTOP-202ENST00000368687 ERO1AQ96HE7 468 aa22.12■■□□□ 1.13
CHTOP-202ENST00000368687 TMOD4Q9NZQ9 345 aa22.12■■□□□ 1.13
CHTOP-202ENST00000368687 SLC3A2P08195 630 aaKnown RBP22.11■■□□□ 1.13
CHTOP-202ENST00000368687 USP14P54578 494 aa22.11■■□□□ 1.13
CHTOP-202ENST00000368687 PKN2Q16513 984 aaKnown RBP22.11■■□□□ 1.13
CHTOP-202ENST00000368687 CTU1Q7Z7A3 348 aaKnown RBP22.11■■□□□ 1.13
CHTOP-202ENST00000368687 NAPBQ9H115 298 aa22.11■■□□□ 1.13
CHTOP-202ENST00000368687 CYP2D6P10635 497 aa22.1■■□□□ 1.13
CHTOP-202ENST00000368687 RAB3GAP1Q15042 981 aa22.1■■□□□ 1.13
CHTOP-202ENST00000368687 TTC22Q5TAA0 569 aa22.1■■□□□ 1.13
CHTOP-202ENST00000368687 IFNL3Q8IZI9 196 aa22.1■■□□□ 1.13
CHTOP-202ENST00000368687 SEC62Q99442 399 aaKnown RBP22.1■■□□□ 1.13
CHTOP-202ENST00000368687 DIAPH3Q9NSV4 1193 aa22.1■■□□□ 1.13
CHTOP-202ENST00000368687 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.1■■□□□ 1.13
CHTOP-202ENST00000368687 CCDC85CA6NKD9 419 aa22.09■■□□□ 1.13
CHTOP-202ENST00000368687 SDSP20132 328 aa22.09■■□□□ 1.13
CHTOP-202ENST00000368687 PDE4AP27815 886 aa22.09■■□□□ 1.13
CHTOP-202ENST00000368687 CDK8P49336 464 aa22.09■■□□□ 1.13
CHTOP-202ENST00000368687 HMGCS2P54868 508 aa22.09■■□□□ 1.13
CHTOP-202ENST00000368687 SP3Q02447 781 aa22.09■■□□□ 1.13
CHTOP-202ENST00000368687 MTMR2Q13614 643 aa22.09■■□□□ 1.13
CHTOP-202ENST00000368687 GPAT2Q6NUI2 795 aa22.09■■□□□ 1.13
CHTOP-202ENST00000368687 FEZ1Q99689 392 aa22.09■■□□□ 1.13
CHTOP-202ENST00000368687 MPHOSPH10O00566 681 aaKnown RBP22.08■■□□□ 1.13
CHTOP-202ENST00000368687 USP17L2Q6R6M4 530 aa22.08■■□□□ 1.13
CHTOP-202ENST00000368687 CCDC84Q86UT8 332 aaPredicted RBP22.08■■□□□ 1.13
CHTOP-202ENST00000368687 DYNLL2Q96FJ2 89 aa22.08■■□□□ 1.13
CHTOP-202ENST00000368687 SH2D4AQ9H788 454 aa22.08■■□□□ 1.13
CHTOP-202ENST00000368687 EPB41L4AQ9HCS5 686 aaPredicted RBP22.08■■□□□ 1.13
CHTOP-202ENST00000368687 ZMYM6O95789 1325 aa22.07■■□□□ 1.12
CHTOP-202ENST00000368687 CCDC171Q6TFL3 1326 aa22.07■■□□□ 1.12
CHTOP-202ENST00000368687 MINDY4BA8MYZ0 360 aa22.07■■□□□ 1.12
CHTOP-202ENST00000368687 JAG1P78504 1218 aa22.07■■□□□ 1.12
CHTOP-202ENST00000368687 PDE4BQ07343 736 aa22.07■■□□□ 1.12
CHTOP-202ENST00000368687 KIF22Q14807 665 aa22.07■■□□□ 1.12
CHTOP-202ENST00000368687 FAM227BQ96M60 508 aa22.07■■□□□ 1.12
CHTOP-202ENST00000368687 KIAA1683Q9H0B3 1180 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms