RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 ADCYAP1R1P41586 468 aa13.18□□□□□ -0.3
TUBE1-201ENST00000368657 CHAF1AQ13111 956 aaPredicted RBP13.18□□□□□ -0.3
TUBE1-201ENST00000368657 MAP2K5Q13163 448 aa13.18□□□□□ -0.3
TUBE1-201ENST00000368657 GCKRQ14397 625 aa13.18□□□□□ -0.3
TUBE1-201ENST00000368657 LDHAL6AQ6ZMR3 332 aa13.18□□□□□ -0.3
TUBE1-201ENST00000368657 TMEM39AQ9NV64 488 aa13.18□□□□□ -0.3
TUBE1-201ENST00000368657 WDFY4Q6ZS81 3184 aa13.18□□□□□ -0.3
TUBE1-201ENST00000368657 PI4KAP2A4QPH2 592 aa13.17□□□□□ -0.3
TUBE1-201ENST00000368657 GLRX3O76003 335 aaKnown RBP13.17□□□□□ -0.3
TUBE1-201ENST00000368657 TMPOP42166 694 aaKnown RBP13.17□□□□□ -0.3
TUBE1-201ENST00000368657 NUBP1P53384 320 aa13.17□□□□□ -0.3
TUBE1-201ENST00000368657 IRX3P78415 501 aaPredicted RBP13.17□□□□□ -0.3
TUBE1-201ENST00000368657 ATP2B2Q01814 1243 aa13.17□□□□□ -0.3
TUBE1-201ENST00000368657 SPP2Q13103 211 aa13.17□□□□□ -0.3
TUBE1-201ENST00000368657 CWF19L2Q2TBE0 894 aaKnown RBP13.17□□□□□ -0.3
TUBE1-201ENST00000368657 CDC42EP5Q6NZY7 148 aa13.17□□□□□ -0.3
TUBE1-201ENST00000368657 FBXO33Q7Z6M2 555 aa13.17□□□□□ -0.3
TUBE1-201ENST00000368657 PI4KAP1Q8N8J0 262 aa13.17□□□□□ -0.3
TUBE1-201ENST00000368657 HLA-CQ95604 372 aa13.17□□□□□ -0.3
TUBE1-201ENST00000368657 FAM198AQ9UFP1 575 aa13.17□□□□□ -0.3
TUBE1-201ENST00000368657 GTPBP6O43824 516 aaPredicted RBP13.16□□□□□ -0.3
TUBE1-201ENST00000368657 HOXA7P31268 230 aaPredicted RBP13.16□□□□□ -0.3
TUBE1-201ENST00000368657 NFIAQ12857 509 aa13.16□□□□□ -0.3
TUBE1-201ENST00000368657 PPIGQ13427 754 aaKnown RBP eCLIP13.16□□□□□ -0.3
TUBE1-201ENST00000368657 SH3D19Q5HYK7 790 aa13.16□□□□□ -0.3
TUBE1-201ENST00000368657 TMEM240Q5SV17 173 aa13.16□□□□□ -0.3
TUBE1-201ENST00000368657 ERMP1Q7Z2K6 904 aa13.16□□□□□ -0.3
TUBE1-201ENST00000368657 SLC44A5Q8NCS7 719 aa13.16□□□□□ -0.3
TUBE1-201ENST00000368657 ZNF280CQ8ND82 737 aa13.16□□□□□ -0.3
TUBE1-201ENST00000368657 CD320Q9NPF0 282 aa13.16□□□□□ -0.3
TUBE1-201ENST00000368657 CNNM1Q9NRU3 951 aa13.16□□□□□ -0.3
TUBE1-201ENST00000368657 TIMP1P01033 207 aa13.15□□□□□ -0.3
TUBE1-201ENST00000368657 HMGCS2P54868 508 aa13.15□□□□□ -0.3
TUBE1-201ENST00000368657 Q3C1V9 767 aa13.15□□□□□ -0.3
TUBE1-201ENST00000368657 CAVIN4Q5BKX8 364 aa13.15□□□□□ -0.3
TUBE1-201ENST00000368657 GTF3C2Q8WUA4 911 aaPredicted RBP13.15□□□□□ -0.3
TUBE1-201ENST00000368657 FERMT2Q96AC1 680 aa13.15□□□□□ -0.3
TUBE1-201ENST00000368657 TOX2Q96NM4 488 aa13.15□□□□□ -0.3
TUBE1-201ENST00000368657 NKX2-4Q9H2Z4 354 aa13.15□□□□□ -0.3
TUBE1-201ENST00000368657 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.15□□□□□ -0.3
TUBE1-201ENST00000368657 CWC22Q9HCG8 908 aaKnown RBP13.15□□□□□ -0.3
TUBE1-201ENST00000368657 USP40Q9NVE5 1235 aa13.15□□□□□ -0.3
TUBE1-201ENST00000368657 RBPJLQ9UBG7 517 aa13.15□□□□□ -0.3
TUBE1-201ENST00000368657 ATRNL1Q5VV63 1379 aa13.15□□□□□ -0.3
TUBE1-201ENST00000368657 PHIPQ8WWQ0 1821 aa13.15□□□□□ -0.3
TUBE1-201ENST00000368657 USP34Q70CQ2 3546 aa13.15□□□□□ -0.3
TUBE1-201ENST00000368657 CFAP54Q96N23 3096 aa13.14□□□□□ -0.31
TUBE1-201ENST00000368657 LRRC37A2A6NM11 1700 aa13.14□□□□□ -0.31
TUBE1-201ENST00000368657 ENTPD3O75355 529 aa13.14□□□□□ -0.31
TUBE1-201ENST00000368657 SLC5A1P13866 664 aa13.14□□□□□ -0.31
TUBE1-201ENST00000368657 CASP7P55210 303 aa13.14□□□□□ -0.31
TUBE1-201ENST00000368657 HERVK_113P62684 666 aa13.14□□□□□ -0.31
TUBE1-201ENST00000368657 ERVK-9P63128 1117 aa13.14□□□□□ -0.31
TUBE1-201ENST00000368657 ERVK-24P63145 666 aa13.14□□□□□ -0.31
TUBE1-201ENST00000368657 MFSD5Q6N075 450 aa13.14□□□□□ -0.31
TUBE1-201ENST00000368657 C16orf59Q7L2K0 433 aa13.14□□□□□ -0.31
TUBE1-201ENST00000368657 ZFPM1Q8IX07 1006 aa13.14□□□□□ -0.31
TUBE1-201ENST00000368657 GJD3Q8N144 294 aa13.14□□□□□ -0.31
TUBE1-201ENST00000368657 TXNRD2Q9NNW7 524 aa13.14□□□□□ -0.31
TUBE1-201ENST00000368657 FLRT1Q9NZU1 646 aa13.14□□□□□ -0.31
TUBE1-201ENST00000368657 IQSEC3Q9UPP2 1182 aaPredicted RBP13.14□□□□□ -0.31
TUBE1-201ENST00000368657 MTCH2Q9Y6C9 303 aa13.14□□□□□ -0.31
TUBE1-201ENST00000368657 SLC15A5A6NIM6 579 aa13.13□□□□□ -0.31
TUBE1-201ENST00000368657 DCDC2CA8MYV0 355 aa13.13□□□□□ -0.31
TUBE1-201ENST00000368657 HOXC6P09630 235 aa13.13□□□□□ -0.31
TUBE1-201ENST00000368657 LRRC41Q15345 812 aa13.13□□□□□ -0.31
TUBE1-201ENST00000368657 CCDC57Q2TAC2 916 aa13.13□□□□□ -0.31
TUBE1-201ENST00000368657 TAF7LQ5H9L4 462 aa13.13□□□□□ -0.31
TUBE1-201ENST00000368657 TRPV1Q8NER1 839 aa13.13□□□□□ -0.31
TUBE1-201ENST00000368657 MS4A3Q96HJ5 214 aa13.13□□□□□ -0.31
TUBE1-201ENST00000368657 MFSD14AQ96MC6 490 aa13.13□□□□□ -0.31
TUBE1-201ENST00000368657 DCBLD2Q96PD2 775 aa13.13□□□□□ -0.31
TUBE1-201ENST00000368657 PORCNQ9H237 461 aa13.13□□□□□ -0.31
TUBE1-201ENST00000368657 MTIF3Q9H2K0 278 aaKnown RBP13.13□□□□□ -0.31
TUBE1-201ENST00000368657 PHF24Q9UPV7 400 aa13.13□□□□□ -0.31
TUBE1-201ENST00000368657 ZNF521Q96K83 1311 aa13.13□□□□□ -0.31
TUBE1-201ENST00000368657 A0A1B0GUL6 1792 aa13.12□□□□□ -0.31
TUBE1-201ENST00000368657 CHD7Q9P2D1 2997 aa13.12□□□□□ -0.31
TUBE1-201ENST00000368657 ZDBF2Q9HCK1 2354 aa13.12□□□□□ -0.31
TUBE1-201ENST00000368657 SEPT4O43236 478 aa13.12□□□□□ -0.31
TUBE1-201ENST00000368657 TBC1D12O60347 775 aa13.12□□□□□ -0.31
TUBE1-201ENST00000368657 CYBAP13498 195 aa13.12□□□□□ -0.31
TUBE1-201ENST00000368657 CYP2C19P33261 490 aa13.12□□□□□ -0.31
TUBE1-201ENST00000368657 FAAP100Q0VG06 881 aa13.12□□□□□ -0.31
TUBE1-201ENST00000368657 CCDC30Q5VVM6 783 aa13.12□□□□□ -0.31
TUBE1-201ENST00000368657 PSRC1Q6PGN9 363 aaPredicted RBP13.12□□□□□ -0.31
TUBE1-201ENST00000368657 ANKRD33Q7Z3H0 272 aa13.12□□□□□ -0.31
TUBE1-201ENST00000368657 CCDC84Q86UT8 332 aaPredicted RBP13.12□□□□□ -0.31
TUBE1-201ENST00000368657 ZSCAN29Q8IWY8 852 aaPredicted RBP13.12□□□□□ -0.31
TUBE1-201ENST00000368657 PHOX2BQ99453 314 aa13.12□□□□□ -0.31
TUBE1-201ENST00000368657 IDI2Q9BXS1 227 aa13.12□□□□□ -0.31
TUBE1-201ENST00000368657 OSBPL5Q9H0X9 879 aaPredicted RBP13.12□□□□□ -0.31
TUBE1-201ENST00000368657 MYH16Q9H6N6 1097 aa13.12□□□□□ -0.31
TUBE1-201ENST00000368657 DOCK1Q14185 1865 aa13.11□□□□□ -0.31
TUBE1-201ENST00000368657 PQBP1O60828 265 aaKnown RBP13.11□□□□□ -0.31
TUBE1-201ENST00000368657 CCNA1P78396 465 aa13.11□□□□□ -0.31
TUBE1-201ENST00000368657 ZNF365Q70YC5 407 aa13.11□□□□□ -0.31
TUBE1-201ENST00000368657 FAM178BQ8IXR5 827 aa13.11□□□□□ -0.31
TUBE1-201ENST00000368657 TMEM199Q8N511 208 aa13.11□□□□□ -0.31
TUBE1-201ENST00000368657 AS3MTQ9HBK9 375 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms