RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 ZHX2Q9Y6X8 837 aa18.05■□□□□ 0.48
SMPDL3A-201ENST00000368440 IGF2BP3O00425 579 aaKnown RBP eCLIP18.04■□□□□ 0.48
SMPDL3A-201ENST00000368440 SBK1Q52WX2 424 aa18.04■□□□□ 0.48
SMPDL3A-201ENST00000368440 CCDC171Q6TFL3 1326 aa18.04■□□□□ 0.48
SMPDL3A-201ENST00000368440 MINDY4BA8MYZ0 360 aa18.03■□□□□ 0.48
SMPDL3A-201ENST00000368440 SREBF2Q12772 1141 aa18.03■□□□□ 0.48
SMPDL3A-201ENST00000368440 AMOTL1Q8IY63 956 aa18.03■□□□□ 0.48
SMPDL3A-201ENST00000368440 STK11IPQ8N1F8 1099 aa18.03■□□□□ 0.48
SMPDL3A-201ENST00000368440 BRI3BPQ8WY22 251 aa18.03■□□□□ 0.48
SMPDL3A-201ENST00000368440 PTPN18Q99952 460 aa18.03■□□□□ 0.48
SMPDL3A-201ENST00000368440 ZBTB21Q9ULJ3 1066 aa18.03■□□□□ 0.48
SMPDL3A-201ENST00000368440 KCNH4Q9UQ05 1017 aa18.03■□□□□ 0.48
SMPDL3A-201ENST00000368440 CCL15-CCL14A0A0B4J2E2 113 aa18.03■□□□□ 0.48
SMPDL3A-201ENST00000368440 TESPA1A2RU30 521 aaPredicted RBP18.03■□□□□ 0.48
SMPDL3A-201ENST00000368440 GTF2A2P52657 109 aa18.03■□□□□ 0.48
SMPDL3A-201ENST00000368440 CCL15Q16663 113 aa18.03■□□□□ 0.48
SMPDL3A-201ENST00000368440 REM2Q8IYK8 340 aaPredicted RBP18.03■□□□□ 0.48
SMPDL3A-201ENST00000368440 RNF186Q9NXI6 227 aa18.03■□□□□ 0.48
SMPDL3A-201ENST00000368440 AFG3L2Q9Y4W6 797 aa18.03■□□□□ 0.48
SMPDL3A-201ENST00000368440 ROBO3Q96MS0 1386 aa18.02■□□□□ 0.48
SMPDL3A-201ENST00000368440 HIP1O00291 1037 aa18.02■□□□□ 0.48
SMPDL3A-201ENST00000368440 GH2P01242 217 aa18.02■□□□□ 0.48
SMPDL3A-201ENST00000368440 CERKLQ49MI3 558 aaPredicted RBP18.02■□□□□ 0.48
SMPDL3A-201ENST00000368440 C16orf86Q6ZW13 317 aa18.02■□□□□ 0.48
SMPDL3A-201ENST00000368440 BEGAINQ9BUH8 593 aa18.02■□□□□ 0.48
SMPDL3A-201ENST00000368440 NAPBQ9H115 298 aa18.02■□□□□ 0.48
SMPDL3A-201ENST00000368440 LOC285556D6RIA3 1793 aa18.01■□□□□ 0.47
SMPDL3A-201ENST00000368440 TRPA1O75762 1119 aa18.01■□□□□ 0.47
SMPDL3A-201ENST00000368440 HSPD1P10809 573 aaKnown RBP18.01■□□□□ 0.47
SMPDL3A-201ENST00000368440 CDK8P49336 464 aa18.01■□□□□ 0.47
SMPDL3A-201ENST00000368440 SNAPC2Q13487 334 aa18.01■□□□□ 0.47
SMPDL3A-201ENST00000368440 IFNL1Q8IU54 200 aa18.01■□□□□ 0.47
SMPDL3A-201ENST00000368440 NACAP1Q9BZK3 213 aa18.01■□□□□ 0.47
SMPDL3A-201ENST00000368440 SWAP70Q9UH65 585 aa18.01■□□□□ 0.47
SMPDL3A-201ENST00000368440 TRIM75PA6NK02 468 aa18.01■□□□□ 0.47
SMPDL3A-201ENST00000368440 ASNSP08243 561 aa18.01■□□□□ 0.47
SMPDL3A-201ENST00000368440 CHMLP26374 656 aa18.01■□□□□ 0.47
SMPDL3A-201ENST00000368440 INHBEP58166 350 aa18.01■□□□□ 0.47
SMPDL3A-201ENST00000368440 MOGSQ13724 837 aa18.01■□□□□ 0.47
SMPDL3A-201ENST00000368440 LAMA4Q16363 1823 aa18.01■□□□□ 0.47
SMPDL3A-201ENST00000368440 GREB1LQ9C091 1923 aaPredicted RBP18■□□□□ 0.47
SMPDL3A-201ENST00000368440 USP17L5A8MUK1 530 aa18■□□□□ 0.47
SMPDL3A-201ENST00000368440 HSPA8P11142 646 aaKnown RBP18■□□□□ 0.47
SMPDL3A-201ENST00000368440 GUCY1A2P33402 732 aa18■□□□□ 0.47
SMPDL3A-201ENST00000368440 ABCB5Q2M3G0 1257 aa18■□□□□ 0.47
SMPDL3A-201ENST00000368440 FAM43AQ8N2R8 423 aa18■□□□□ 0.47
SMPDL3A-201ENST00000368440 CETPP11597 493 aa17.99■□□□□ 0.47
SMPDL3A-201ENST00000368440 SPP2Q13103 211 aa17.99■□□□□ 0.47
SMPDL3A-201ENST00000368440 DGKZQ13574 1117 aa17.99■□□□□ 0.47
SMPDL3A-201ENST00000368440 A0A0G2JLL6 359 aaPredicted RBP17.99■□□□□ 0.47
SMPDL3A-201ENST00000368440 CXCL11O14625 94 aa17.99■□□□□ 0.47
SMPDL3A-201ENST00000368440 FGAP02671 866 aa17.99■□□□□ 0.47
SMPDL3A-201ENST00000368440 AKR1B1P15121 316 aa17.99■□□□□ 0.47
SMPDL3A-201ENST00000368440 PPARAQ07869 468 aa17.99■□□□□ 0.47
SMPDL3A-201ENST00000368440 BMP2KLQ5H9B9 411 aa17.99■□□□□ 0.47
SMPDL3A-201ENST00000368440 PRRT2Q7Z6L0 340 aaPredicted RBP17.99■□□□□ 0.47
SMPDL3A-201ENST00000368440 R3HDMLQ9H3Y0 253 aa17.99■□□□□ 0.47
SMPDL3A-201ENST00000368440 SAGE1Q9NXZ1 904 aa17.99■□□□□ 0.47
SMPDL3A-201ENST00000368440 BTBD19C9JJ37 291 aa17.98■□□□□ 0.47
SMPDL3A-201ENST00000368440 MPHOSPH10O00566 681 aaKnown RBP17.98■□□□□ 0.47
SMPDL3A-201ENST00000368440 CTDSPL2Q05D32 466 aa17.98■□□□□ 0.47
SMPDL3A-201ENST00000368440 RAB3GAP1Q15042 981 aa17.98■□□□□ 0.47
SMPDL3A-201ENST00000368440 ALX1Q15699 326 aa17.98■□□□□ 0.47
SMPDL3A-201ENST00000368440 ZNF280CQ8ND82 737 aa17.98■□□□□ 0.47
SMPDL3A-201ENST00000368440 GINM1Q9NU53 330 aa17.98■□□□□ 0.47
SMPDL3A-201ENST00000368440 CA12O43570 354 aa17.97■□□□□ 0.47
SMPDL3A-201ENST00000368440 PRDM1O75626 825 aa17.97■□□□□ 0.47
SMPDL3A-201ENST00000368440 TBC1D8O95759 1140 aa17.97■□□□□ 0.47
SMPDL3A-201ENST00000368440 RASA1P20936 1047 aa17.97■□□□□ 0.47
SMPDL3A-201ENST00000368440 CTCFP49711 727 aaPredicted RBP17.97■□□□□ 0.47
SMPDL3A-201ENST00000368440 LBX1P52954 281 aa17.97■□□□□ 0.47
SMPDL3A-201ENST00000368440 MFAP1P55081 439 aaKnown RBP17.97■□□□□ 0.47
SMPDL3A-201ENST00000368440 SEPT2Q15019 361 aa17.97■□□□□ 0.47
SMPDL3A-201ENST00000368440 CLEC10AQ8IUN9 316 aa17.97■□□□□ 0.47
SMPDL3A-201ENST00000368440 WDR18Q9BV38 432 aa17.97■□□□□ 0.47
SMPDL3A-201ENST00000368440 TAOK2Q9UL54 1235 aa17.97■□□□□ 0.47
SMPDL3A-201ENST00000368440 TACC3Q9Y6A5 838 aa17.97■□□□□ 0.47
SMPDL3A-201ENST00000368440 GPAT2Q6NUI2 795 aa17.97■□□□□ 0.47
SMPDL3A-201ENST00000368440 AS3MTQ9HBK9 375 aa17.97■□□□□ 0.47
SMPDL3A-201ENST00000368440 CABP5Q9NP86 173 aa17.97■□□□□ 0.47
SMPDL3A-201ENST00000368440 ZMYM6O95789 1325 aa17.96■□□□□ 0.47
SMPDL3A-201ENST00000368440 RAD50Q92878 1312 aa17.96■□□□□ 0.47
SMPDL3A-201ENST00000368440 HMGCS2P54868 508 aa17.96■□□□□ 0.47
SMPDL3A-201ENST00000368440 MTMR2Q13614 643 aa17.96■□□□□ 0.47
SMPDL3A-201ENST00000368440 GADL1Q6ZQY3 521 aa17.96■□□□□ 0.47
SMPDL3A-201ENST00000368440 TBC1D2Q9BYX2 928 aa17.96■□□□□ 0.47
SMPDL3A-201ENST00000368440 INCENPQ9NQS7 918 aa17.96■□□□□ 0.47
SMPDL3A-201ENST00000368440 ACER1Q8TDN7 264 aa17.95■□□□□ 0.46
SMPDL3A-201ENST00000368440 ALDH1A1P00352 501 aa17.95■□□□□ 0.46
SMPDL3A-201ENST00000368440 HAND2P61296 217 aa17.95■□□□□ 0.46
SMPDL3A-201ENST00000368440 CRHR2Q13324 411 aa17.95■□□□□ 0.46
SMPDL3A-201ENST00000368440 TMEM179Q6ZVK1 233 aa17.95■□□□□ 0.46
SMPDL3A-201ENST00000368440 CCDC17Q96LX7 622 aa17.95■□□□□ 0.46
SMPDL3A-201ENST00000368440 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.95■□□□□ 0.46
SMPDL3A-201ENST00000368440 NBPF3Q9H094 633 aa17.95■□□□□ 0.46
SMPDL3A-201ENST00000368440 MKNK2Q9HBH9 465 aa17.95■□□□□ 0.46
SMPDL3A-201ENST00000368440 ANAPC4Q9UJX5 808 aa17.95■□□□□ 0.46
SMPDL3A-201ENST00000368440 CASP8AP2Q9UKL3 1982 aa17.94■□□□□ 0.46
SMPDL3A-201ENST00000368440 SGSM2O43147 1006 aa17.94■□□□□ 0.46
SMPDL3A-201ENST00000368440 BACE1P56817 501 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms