RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 NECAB1Q8N987 351 aa13.39□□□□□ -0.27
USF1-201ENST00000368019 EAF2Q96CJ1 260 aaPredicted RBP13.39□□□□□ -0.27
USF1-201ENST00000368019 TRIM5Q9C035 493 aa13.39□□□□□ -0.27
USF1-201ENST00000368019 DEFB129Q9H1M3 183 aa13.39□□□□□ -0.27
USF1-201ENST00000368019 RCOR1Q9UKL0 485 aa13.39□□□□□ -0.27
USF1-201ENST00000368019 PCDHAC2Q9Y5I4 1007 aa13.39□□□□□ -0.27
USF1-201ENST00000368019 SSC5DA1L4H1 1573 aa13.39□□□□□ -0.27
USF1-201ENST00000368019 HTTP42858 3142 aa13.39□□□□□ -0.27
USF1-201ENST00000368019 GPR25O00155 361 aa13.38□□□□□ -0.27
USF1-201ENST00000368019 TNNT1P13805 278 aa13.38□□□□□ -0.27
USF1-201ENST00000368019 PLCB2Q00722 1185 aa13.38□□□□□ -0.27
USF1-201ENST00000368019 NCBP1Q09161 790 aaKnown RBP13.38□□□□□ -0.27
USF1-201ENST00000368019 IQCB1Q15051 598 aa13.38□□□□□ -0.27
USF1-201ENST00000368019 LMBR1LQ6UX01 489 aa13.38□□□□□ -0.27
USF1-201ENST00000368019 LUZP1Q86V48 1076 aa13.38□□□□□ -0.27
USF1-201ENST00000368019 SPC24Q8NBT2 197 aa13.38□□□□□ -0.27
USF1-201ENST00000368019 PGBD1Q96JS3 809 aa13.38□□□□□ -0.27
USF1-201ENST00000368019 NEK1Q96PY6 1258 aa13.38□□□□□ -0.27
USF1-201ENST00000368019 FSD1Q9BTV5 496 aa13.38□□□□□ -0.27
USF1-201ENST00000368019 R3HDMLQ9H3Y0 253 aa13.38□□□□□ -0.27
USF1-201ENST00000368019 COPRSQ9NQ92 184 aa13.38□□□□□ -0.27
USF1-201ENST00000368019 HPS5Q9UPZ3 1129 aa13.38□□□□□ -0.27
USF1-201ENST00000368019 A0A0D9SFI3 127 aa13.37□□□□□ -0.27
USF1-201ENST00000368019 GOLGA6L19H0YKK7 550 aa13.37□□□□□ -0.27
USF1-201ENST00000368019 GSDMDP57764 484 aa13.37□□□□□ -0.27
USF1-201ENST00000368019 SREBF2Q12772 1141 aa13.37□□□□□ -0.27
USF1-201ENST00000368019 MKRN3Q13064 507 aaKnown RBP13.37□□□□□ -0.27
USF1-201ENST00000368019 PRKG1Q13976 671 aa13.37□□□□□ -0.27
USF1-201ENST00000368019 ATP2B3Q16720 1220 aa13.37□□□□□ -0.27
USF1-201ENST00000368019 CCDC112Q8NEF3 446 aa13.37□□□□□ -0.27
USF1-201ENST00000368019 BICD2Q8TD16 824 aa13.37□□□□□ -0.27
USF1-201ENST00000368019 SUCLG2Q96I99 432 aa13.37□□□□□ -0.27
USF1-201ENST00000368019 ZNF594Q96JF6 807 aaPredicted RBP13.37□□□□□ -0.27
USF1-201ENST00000368019 PRMT6Q96LA8 375 aaPredicted RBP13.37□□□□□ -0.27
USF1-201ENST00000368019 FAM227BQ96M60 508 aa13.37□□□□□ -0.27
USF1-201ENST00000368019 ZNF396Q96N95 335 aaPredicted RBP13.37□□□□□ -0.27
USF1-201ENST00000368019 AGXT2Q9BYV1 514 aa13.37□□□□□ -0.27
USF1-201ENST00000368019 IMPACTQ9P2X3 320 aa13.37□□□□□ -0.27
USF1-201ENST00000368019 ANGEL1Q9UNK9 670 aaKnown RBP13.37□□□□□ -0.27
USF1-201ENST00000368019 FZD1Q9UP38 647 aa13.37□□□□□ -0.27
USF1-201ENST00000368019 PPP2R3BQ9Y5P8 575 aa13.37□□□□□ -0.27
USF1-201ENST00000368019 SPDYE2BA6NHP3 402 aa13.36□□□□□ -0.27
USF1-201ENST00000368019 UNCXA6NJT0 531 aa13.36□□□□□ -0.27
USF1-201ENST00000368019 PFKFB2O60825 505 aa13.36□□□□□ -0.27
USF1-201ENST00000368019 SPDYE6P0CI01 402 aa13.36□□□□□ -0.27
USF1-201ENST00000368019 CFAP100Q494V2 611 aa13.36□□□□□ -0.27
USF1-201ENST00000368019 NYAP1Q6ZVC0 841 aa13.36□□□□□ -0.27
USF1-201ENST00000368019 ZNF804AQ7Z570 1209 aa13.36□□□□□ -0.27
USF1-201ENST00000368019 DRC7Q8IY82 874 aa13.36□□□□□ -0.27
USF1-201ENST00000368019 FBXL16Q8N461 479 aa13.36□□□□□ -0.27
USF1-201ENST00000368019 KAZALD1Q96I82 304 aa13.36□□□□□ -0.27
USF1-201ENST00000368019 BPIFA3Q9BQP9 254 aa13.36□□□□□ -0.27
USF1-201ENST00000368019 LARP6Q9BRS8 491 aaKnown RBP13.36□□□□□ -0.27
USF1-201ENST00000368019 ANO10Q9NW15 660 aa13.36□□□□□ -0.27
USF1-201ENST00000368019 CLIP2Q9UDT6 1046 aa13.36□□□□□ -0.27
USF1-201ENST00000368019 CTNNA3Q9UI47 895 aa13.36□□□□□ -0.27
USF1-201ENST00000368019 MORC2Q9Y6X9 1032 aaPredicted RBP13.36□□□□□ -0.27
USF1-201ENST00000368019 FAM205AQ6ZU69 1335 aa13.36□□□□□ -0.27
USF1-201ENST00000368019 ARAP2Q8WZ64 1704 aa13.36□□□□□ -0.27
USF1-201ENST00000368019 OTOFQ9HC10 1997 aa13.35□□□□□ -0.27
USF1-201ENST00000368019 INHBEP58166 350 aa13.35□□□□□ -0.27
USF1-201ENST00000368019 CCDC57Q2TAC2 916 aa13.35□□□□□ -0.27
USF1-201ENST00000368019 LDHAL6AQ6ZMR3 332 aa13.35□□□□□ -0.27
USF1-201ENST00000368019 LRRC8AQ8IWT6 810 aa13.35□□□□□ -0.27
USF1-201ENST00000368019 ZNF397Q8NF99 534 aaPredicted RBP13.35□□□□□ -0.27
USF1-201ENST00000368019 BRF1Q92994 677 aa13.35□□□□□ -0.27
USF1-201ENST00000368019 SLC10A4Q96EP9 437 aa13.35□□□□□ -0.27
USF1-201ENST00000368019 DDX41Q9UJV9 622 aaKnown RBP13.35□□□□□ -0.27
USF1-201ENST00000368019 CHMP3Q9Y3E7 222 aa13.35□□□□□ -0.27
USF1-201ENST00000368019 MANSC4A6NHS7 340 aaPredicted RBP13.34□□□□□ -0.27
USF1-201ENST00000368019 F8W031 263 aaPredicted RBP13.34□□□□□ -0.27
USF1-201ENST00000368019 PPP1R12BO60237 982 aaPredicted RBP13.34□□□□□ -0.27
USF1-201ENST00000368019 FKTNO75072 461 aa13.34□□□□□ -0.27
USF1-201ENST00000368019 NR1I2O75469 434 aa13.34□□□□□ -0.27
USF1-201ENST00000368019 ALDH1A1P00352 501 aa13.34□□□□□ -0.27
USF1-201ENST00000368019 ZBTB48P10074 688 aaPredicted RBP13.34□□□□□ -0.27
USF1-201ENST00000368019 UBE4AQ14139 1066 aa13.34□□□□□ -0.27
USF1-201ENST00000368019 RABL6Q3YEC7 729 aaPredicted RBP13.34□□□□□ -0.27
USF1-201ENST00000368019 NBPF12Q5TAG4 269 aaPredicted RBP13.34□□□□□ -0.27
USF1-201ENST00000368019 FBXO46Q6PJ61 603 aaPredicted RBP13.34□□□□□ -0.27
USF1-201ENST00000368019 CCDC73Q6ZRK6 1079 aa13.34□□□□□ -0.27
USF1-201ENST00000368019 CACTINQ8WUQ7 758 aaKnown RBP13.34□□□□□ -0.27
USF1-201ENST00000368019 ERO1AQ96HE7 468 aa13.34□□□□□ -0.27
USF1-201ENST00000368019 WNK4Q96J92 1243 aa13.34□□□□□ -0.27
USF1-201ENST00000368019 CLMNQ96JQ2 1002 aa13.34□□□□□ -0.27
USF1-201ENST00000368019 DSCC1Q9BVC3 393 aa13.34□□□□□ -0.27
USF1-201ENST00000368019 NAT10Q9H0A0 1025 aaKnown RBP13.34□□□□□ -0.27
USF1-201ENST00000368019 OSBPL5Q9H0X9 879 aaPredicted RBP13.34□□□□□ -0.27
USF1-201ENST00000368019 BICC1Q9H694 974 aaKnown RBP13.34□□□□□ -0.27
USF1-201ENST00000368019 PA2G4Q9UQ80 394 aaKnown RBP13.34□□□□□ -0.27
USF1-201ENST00000368019 CENPFP49454 3210 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 A0A1W2PQ27 194 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 A0A1W2PQ64 194 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 A0A1W2PQD8 194 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 CLRN2A0PK11 232 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 H3BQV1 296 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 MYO1BO43795 1136 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 USP2O75604 605 aaPredicted RBP13.33□□□□□ -0.28
USF1-201ENST00000368019 ADD1P35611 737 aaKnown RBP13.33□□□□□ -0.28
USF1-201ENST00000368019 CBX1P83916 185 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms