RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 PUS7LQ9H0K6 701 aaKnown RBP17.69■□□□□ 0.42
SF3B5-201ENST00000367569 ZHX2Q9Y6X8 837 aa17.69■□□□□ 0.42
SF3B5-201ENST00000367569 SMIM22K7EJ46 135 aa17.68■□□□□ 0.42
SF3B5-201ENST00000367569 M0R2C6 588 aa17.68■□□□□ 0.42
SF3B5-201ENST00000367569 ERC2O15083 957 aa17.68■□□□□ 0.42
SF3B5-201ENST00000367569 NPM3O75607 178 aaKnown RBP17.68■□□□□ 0.42
SF3B5-201ENST00000367569 GLRX3O76003 335 aaKnown RBP17.68■□□□□ 0.42
SF3B5-201ENST00000367569 GDF11O95390 407 aa17.68■□□□□ 0.42
SF3B5-201ENST00000367569 MYCP01106 439 aaPredicted RBP17.68■□□□□ 0.42
SF3B5-201ENST00000367569 PTPRAP18433 802 aa17.68■□□□□ 0.42
SF3B5-201ENST00000367569 PDE1AP54750 535 aa17.68■□□□□ 0.42
SF3B5-201ENST00000367569 CHD1LQ86WJ1 897 aa17.68■□□□□ 0.42
SF3B5-201ENST00000367569 TRIM34Q9BYJ4 488 aa17.68■□□□□ 0.42
SF3B5-201ENST00000367569 PICK1Q9NRD5 415 aa17.68■□□□□ 0.42
SF3B5-201ENST00000367569 LOC285556D6RIA3 1793 aa17.67■□□□□ 0.42
SF3B5-201ENST00000367569 CYP2D7A0A087X1C5 515 aa17.67■□□□□ 0.42
SF3B5-201ENST00000367569 GNRH1P01148 92 aa17.67■□□□□ 0.42
SF3B5-201ENST00000367569 CYP2C8P10632 490 aa17.67■□□□□ 0.42
SF3B5-201ENST00000367569 PSMC4P43686 418 aa17.67■□□□□ 0.42
SF3B5-201ENST00000367569 JAG1P78504 1218 aa17.67■□□□□ 0.42
SF3B5-201ENST00000367569 NUCB1Q02818 461 aa17.67■□□□□ 0.42
SF3B5-201ENST00000367569 TRIM47Q96LD4 638 aa17.67■□□□□ 0.42
SF3B5-201ENST00000367569 SEC62Q99442 399 aaKnown RBP17.67■□□□□ 0.42
SF3B5-201ENST00000367569 AFG3L2Q9Y4W6 797 aa17.67■□□□□ 0.42
SF3B5-201ENST00000367569 A0A0G2JLL6 359 aaPredicted RBP17.66■□□□□ 0.42
SF3B5-201ENST00000367569 HLA-DOAP06340 250 aa17.66■□□□□ 0.42
SF3B5-201ENST00000367569 UBE3CQ15386 1083 aa17.66■□□□□ 0.42
SF3B5-201ENST00000367569 ZSCAN25Q6NSZ9 544 aa17.66■□□□□ 0.42
SF3B5-201ENST00000367569 PRRT2Q7Z6L0 340 aaPredicted RBP17.66■□□□□ 0.42
SF3B5-201ENST00000367569 OSBP2Q969R2 916 aa17.66■□□□□ 0.42
SF3B5-201ENST00000367569 MCM9Q9NXL9 1143 aa17.66■□□□□ 0.42
SF3B5-201ENST00000367569 SRRDQ9UH36 339 aa17.66■□□□□ 0.42
SF3B5-201ENST00000367569 RNF113AO15541 343 aaKnown RBP17.65■□□□□ 0.42
SF3B5-201ENST00000367569 CTNND1O60716 968 aaKnown RBP17.65■□□□□ 0.42
SF3B5-201ENST00000367569 IGSF3O75054 1194 aa17.65■□□□□ 0.42
SF3B5-201ENST00000367569 BCRP11274 1271 aa17.65■□□□□ 0.42
SF3B5-201ENST00000367569 PLCD1P51178 756 aa17.65■□□□□ 0.42
SF3B5-201ENST00000367569 PRMT2P55345 433 aa17.65■□□□□ 0.42
SF3B5-201ENST00000367569 PARK7Q99497 189 aaKnown RBP17.65■□□□□ 0.42
SF3B5-201ENST00000367569 PI4KBQ9UBF8 816 aa17.65■□□□□ 0.42
SF3B5-201ENST00000367569 SLC4A4Q9Y6R1 1079 aa17.65■□□□□ 0.42
SF3B5-201ENST00000367569 TRIM75PA6NK02 468 aa17.64■□□□□ 0.41
SF3B5-201ENST00000367569 TBC1D12O60347 775 aa17.64■□□□□ 0.41
SF3B5-201ENST00000367569 FMNL1O95466 1100 aaPredicted RBP17.64■□□□□ 0.41
SF3B5-201ENST00000367569 POLR3DP05423 398 aaPredicted RBP17.64■□□□□ 0.41
SF3B5-201ENST00000367569 OSBPP22059 807 aa17.64■□□□□ 0.41
SF3B5-201ENST00000367569 PDE4AP27815 886 aa17.64■□□□□ 0.41
SF3B5-201ENST00000367569 GADL1Q6ZQY3 521 aa17.64■□□□□ 0.41
SF3B5-201ENST00000367569 CCDC129Q6ZRS4 1044 aa17.64■□□□□ 0.41
SF3B5-201ENST00000367569 FASTKD5Q7L8L6 764 aaKnown RBP17.64■□□□□ 0.41
SF3B5-201ENST00000367569 STK11IPQ8N1F8 1099 aa17.64■□□□□ 0.41
SF3B5-201ENST00000367569 SLC44A5Q8NCS7 719 aa17.64■□□□□ 0.41
SF3B5-201ENST00000367569 APPBP2Q92624 585 aa17.64■□□□□ 0.41
SF3B5-201ENST00000367569 DHX36Q9H2U1 1008 aaKnown RBP17.64■□□□□ 0.41
SF3B5-201ENST00000367569 DCP1AQ9NPI6 582 aaPredicted RBP17.64■□□□□ 0.41
SF3B5-201ENST00000367569 STAP2Q9UGK3 403 aa17.64■□□□□ 0.41
SF3B5-201ENST00000367569 CERS3Q8IU89 383 aa17.63■□□□□ 0.41
SF3B5-201ENST00000367569 PLEKHM2Q8IWE5 1019 aa17.63■□□□□ 0.41
SF3B5-201ENST00000367569 DYNLL2Q96FJ2 89 aa17.63■□□□□ 0.41
SF3B5-201ENST00000367569 HERC5Q9UII4 1024 aaKnown RBP17.63■□□□□ 0.41
SF3B5-201ENST00000367569 MGAMO43451 1857 aa17.63■□□□□ 0.41
SF3B5-201ENST00000367569 TRIM6-TRIM34B2RNG4 842 aa17.62■□□□□ 0.41
SF3B5-201ENST00000367569 GPAA1O43292 621 aa17.62■□□□□ 0.41
SF3B5-201ENST00000367569 HOXD10P28358 340 aa17.62■□□□□ 0.41
SF3B5-201ENST00000367569 CAP2P40123 477 aa17.62■□□□□ 0.41
SF3B5-201ENST00000367569 MTFR1Q15390 333 aa17.62■□□□□ 0.41
SF3B5-201ENST00000367569 TMED8Q6PL24 325 aaPredicted RBP17.62■□□□□ 0.41
SF3B5-201ENST00000367569 SKAP1Q86WV1 359 aa17.62■□□□□ 0.41
SF3B5-201ENST00000367569 MYPNQ86TC9 1320 aa17.62■□□□□ 0.41
SF3B5-201ENST00000367569 RAET1EQ8TD07 263 aa17.61■□□□□ 0.41
SF3B5-201ENST00000367569 RILPL2Q969X0 211 aa17.61■□□□□ 0.41
SF3B5-201ENST00000367569 EPB41L4AQ9HCS5 686 aaPredicted RBP17.61■□□□□ 0.41
SF3B5-201ENST00000367569 SERPINB13Q9UIV8 391 aa17.61■□□□□ 0.41
SF3B5-201ENST00000367569 ZBTB21Q9ULJ3 1066 aa17.61■□□□□ 0.41
SF3B5-201ENST00000367569 SLC45A1Q9Y2W3 748 aa17.61■□□□□ 0.41
SF3B5-201ENST00000367569 CEP290O15078 2479 aa17.61■□□□□ 0.41
SF3B5-201ENST00000367569 GRK4P32298 578 aa17.6■□□□□ 0.41
SF3B5-201ENST00000367569 SHMT1P34896 483 aa17.6■□□□□ 0.41
SF3B5-201ENST00000367569 PRKCZQ05513 592 aa17.6■□□□□ 0.41
SF3B5-201ENST00000367569 TTC6Q86TZ1 520 aa17.6■□□□□ 0.41
SF3B5-201ENST00000367569 CLEC10AQ8IUN9 316 aa17.6■□□□□ 0.41
SF3B5-201ENST00000367569 STRBPQ96SI9 672 aaKnown RBP17.6■□□□□ 0.41
SF3B5-201ENST00000367569 GH2P01242 217 aa17.59■□□□□ 0.41
SF3B5-201ENST00000367569 ZFYP08048 801 aaPredicted RBP17.59■□□□□ 0.41
SF3B5-201ENST00000367569 FCGRTP55899 365 aa17.59■□□□□ 0.41
SF3B5-201ENST00000367569 ZMYM1Q5SVZ6 1142 aa17.59■□□□□ 0.41
SF3B5-201ENST00000367569 TREML2Q5T2D2 321 aa17.59■□□□□ 0.41
SF3B5-201ENST00000367569 FOXP4Q8IVH2 680 aaPredicted RBP17.59■□□□□ 0.41
SF3B5-201ENST00000367569 EVI5LQ96CN4 794 aa17.59■□□□□ 0.41
SF3B5-201ENST00000367569 FAM227BQ96M60 508 aa17.59■□□□□ 0.41
SF3B5-201ENST00000367569 EHD4Q9H223 541 aa17.59■□□□□ 0.41
SF3B5-201ENST00000367569 GABRQQ9UN88 632 aa17.59■□□□□ 0.41
SF3B5-201ENST00000367569 A0A0D9SFI3 127 aa17.58■□□□□ 0.4
SF3B5-201ENST00000367569 GSG1L2A8MUP6 293 aa17.58■□□□□ 0.4
SF3B5-201ENST00000367569 USP17L12C9JPN9 530 aa17.58■□□□□ 0.4
SF3B5-201ENST00000367569 USP17L21D6R901 530 aa17.58■□□□□ 0.4
SF3B5-201ENST00000367569 HMGCS2P54868 508 aa17.58■□□□□ 0.4
SF3B5-201ENST00000367569 SPP2Q13103 211 aa17.58■□□□□ 0.4
SF3B5-201ENST00000367569 ZYXQ15942 572 aaKnown RBP17.58■□□□□ 0.4
SF3B5-201ENST00000367569 METTL16Q86W50 562 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms