RNA–Protein interactions for RNA: ENST00000366731.9

MRPL55-205, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2 BASIC

Gene MRPL55, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-205ENST00000366731 C17orf99Q6UX52 265 aa16.47■□□□□ 0.23
MRPL55-205ENST00000366731 PI4K2BQ8TCG2 481 aa16.47■□□□□ 0.23
MRPL55-205ENST00000366731 EHD4Q9H223 541 aa16.47■□□□□ 0.23
MRPL55-205ENST00000366731 SMIM22K7EJ46 135 aa16.46■□□□□ 0.23
MRPL55-205ENST00000366731 RNF113AO15541 343 aaKnown RBP16.46■□□□□ 0.23
MRPL55-205ENST00000366731 GLRX3O76003 335 aaKnown RBP16.46■□□□□ 0.23
MRPL55-205ENST00000366731 SOX10P56693 466 aa16.46■□□□□ 0.23
MRPL55-205ENST00000366731 LACTBP83111 547 aaPredicted RBP16.46■□□□□ 0.23
MRPL55-205ENST00000366731 KIF22Q14807 665 aa16.46■□□□□ 0.23
MRPL55-205ENST00000366731 RAB3GAP1Q15042 981 aa16.46■□□□□ 0.23
MRPL55-205ENST00000366731 TATDN1Q6P1N9 297 aa16.46■□□□□ 0.23
MRPL55-205ENST00000366731 SLC44A5Q8NCS7 719 aa16.46■□□□□ 0.23
MRPL55-205ENST00000366731 OSBP2Q969R2 916 aa16.46■□□□□ 0.23
MRPL55-205ENST00000366731 DYNLL2Q96FJ2 89 aa16.46■□□□□ 0.23
MRPL55-205ENST00000366731 LNPKQ9C0E8 428 aa16.46■□□□□ 0.23
MRPL55-205ENST00000366731 AGTPBP1Q9UPW5 1226 aa16.46■□□□□ 0.23
MRPL55-205ENST00000366731 PTPN22Q9Y2R2 807 aa16.46■□□□□ 0.23
MRPL55-205ENST00000366731 MPHOSPH10O00566 681 aaKnown RBP16.45■□□□□ 0.22
MRPL55-205ENST00000366731 SHMT1P34896 483 aa16.45■□□□□ 0.22
MRPL55-205ENST00000366731 AAMPQ13685 434 aa16.45■□□□□ 0.22
MRPL55-205ENST00000366731 ZYXQ15942 572 aaKnown RBP16.45■□□□□ 0.22
MRPL55-205ENST00000366731 ABCB5Q2M3G0 1257 aa16.45■□□□□ 0.22
MRPL55-205ENST00000366731 SMCR8Q8TEV9 937 aaPredicted RBP16.45■□□□□ 0.22
MRPL55-205ENST00000366731 FSD1Q9BTV5 496 aa16.45■□□□□ 0.22
MRPL55-205ENST00000366731 WDR18Q9BV38 432 aa16.45■□□□□ 0.22
MRPL55-205ENST00000366731 TBC1D2Q9BYX2 928 aa16.45■□□□□ 0.22
MRPL55-205ENST00000366731 ATP8A2Q9NTI2 1148 aa16.45■□□□□ 0.22
MRPL55-205ENST00000366731 TMOD4Q9NZQ9 345 aa16.45■□□□□ 0.22
MRPL55-205ENST00000366731 LAMB1P07942 1786 aa16.45■□□□□ 0.22
MRPL55-205ENST00000366731 DOCK1Q14185 1865 aa16.45■□□□□ 0.22
MRPL55-205ENST00000366731 USP17L12C9JPN9 530 aa16.45■□□□□ 0.22
MRPL55-205ENST00000366731 USP17L21D6R901 530 aa16.45■□□□□ 0.22
MRPL55-205ENST00000366731 BACE1P56817 501 aa16.45■□□□□ 0.22
MRPL55-205ENST00000366731 ARHGEF6Q15052 776 aa16.45■□□□□ 0.22
MRPL55-205ENST00000366731 PROCA1Q8NCQ7 364 aaPredicted RBP16.45■□□□□ 0.22
MRPL55-205ENST00000366731 APPBP2Q92624 585 aa16.45■□□□□ 0.22
MRPL55-205ENST00000366731 DDRGK1Q96HY6 314 aa16.45■□□□□ 0.22
MRPL55-205ENST00000366731 STRBPQ96SI9 672 aaKnown RBP16.45■□□□□ 0.22
MRPL55-205ENST00000366731 CABP5Q9NP86 173 aa16.45■□□□□ 0.22
MRPL55-205ENST00000366731 SIPA1L1O43166 1804 aa16.44■□□□□ 0.22
MRPL55-205ENST00000366731 USP17L10C9JJH3 530 aa16.44■□□□□ 0.22
MRPL55-205ENST00000366731 M0R2C6 588 aa16.44■□□□□ 0.22
MRPL55-205ENST00000366731 FMNL1O95466 1100 aaPredicted RBP16.44■□□□□ 0.22
MRPL55-205ENST00000366731 CTGFP29279 349 aa16.44■□□□□ 0.22
MRPL55-205ENST00000366731 PSMC4P43686 418 aa16.44■□□□□ 0.22
MRPL55-205ENST00000366731 GABPAQ06546 454 aa16.44■□□□□ 0.22
MRPL55-205ENST00000366731 STK11IPQ8N1F8 1099 aa16.44■□□□□ 0.22
MRPL55-205ENST00000366731 GINM1Q9NU53 330 aa16.44■□□□□ 0.22
MRPL55-205ENST00000366731 SLC45A1Q9Y2W3 748 aa16.44■□□□□ 0.22
MRPL55-205ENST00000366731 ADGRA2Q96PE1 1338 aa16.44■□□□□ 0.22
MRPL55-205ENST00000366731 CDK5RAP2Q96SN8 1893 aa16.43■□□□□ 0.22
MRPL55-205ENST00000366731 ZFYP08048 801 aaPredicted RBP16.43■□□□□ 0.22
MRPL55-205ENST00000366731 PDE1AP54750 535 aa16.43■□□□□ 0.22
MRPL55-205ENST00000366731 SH3D19Q5HYK7 790 aa16.43■□□□□ 0.22
MRPL55-205ENST00000366731 AMOTL1Q8IY63 956 aa16.43■□□□□ 0.22
MRPL55-205ENST00000366731 ANKRD13CQ8N6S4 541 aa16.43■□□□□ 0.22
MRPL55-205ENST00000366731 SEC62Q99442 399 aaKnown RBP16.43■□□□□ 0.22
MRPL55-205ENST00000366731 FEZ1Q99689 392 aa16.43■□□□□ 0.22
MRPL55-205ENST00000366731 SALL3Q9BXA9 1300 aa16.43■□□□□ 0.22
MRPL55-205ENST00000366731 PTCH2Q9Y6C5 1203 aa16.43■□□□□ 0.22
MRPL55-205ENST00000366731 C19orf81C9J6K1 198 aa16.42■□□□□ 0.22
MRPL55-205ENST00000366731 GPAA1O43292 621 aa16.42■□□□□ 0.22
MRPL55-205ENST00000366731 APPP05067 770 aa16.42■□□□□ 0.22
MRPL55-205ENST00000366731 BCRP11274 1271 aa16.42■□□□□ 0.22
MRPL55-205ENST00000366731 OSBPP22059 807 aa16.42■□□□□ 0.22
MRPL55-205ENST00000366731 SEPT2Q15019 361 aa16.42■□□□□ 0.22
MRPL55-205ENST00000366731 LRRFIP1Q32MZ4 808 aaKnown RBP16.42■□□□□ 0.22
MRPL55-205ENST00000366731 C12orf60Q5U649 245 aa16.42■□□□□ 0.22
MRPL55-205ENST00000366731 CTR9Q6PD62 1173 aa16.42■□□□□ 0.22
MRPL55-205ENST00000366731 SMC5Q8IY18 1101 aa16.42■□□□□ 0.22
MRPL55-205ENST00000366731 ACER1Q8TDN7 264 aa16.42■□□□□ 0.22
MRPL55-205ENST00000366731 TRIM47Q96LD4 638 aa16.42■□□□□ 0.22
MRPL55-205ENST00000366731 ASCC2Q9H1I8 757 aaPredicted RBP16.42■□□□□ 0.22
MRPL55-205ENST00000366731 EMILIN3Q9NT22 766 aa16.42■□□□□ 0.22
MRPL55-205ENST00000366731 PNMA3Q9UL41 463 aa16.42■□□□□ 0.22
MRPL55-205ENST00000366731 MYH1P12882 1939 aa16.41■□□□□ 0.22
MRPL55-205ENST00000366731 GSG1L2A8MUP6 293 aa16.41■□□□□ 0.22
MRPL55-205ENST00000366731 MYCP01106 439 aaPredicted RBP16.41■□□□□ 0.22
MRPL55-205ENST00000366731 GUCY1A2P33402 732 aa16.41■□□□□ 0.22
MRPL55-205ENST00000366731 IRX3P78415 501 aaPredicted RBP16.41■□□□□ 0.22
MRPL55-205ENST00000366731 PABPC4Q13310 644 aaKnown RBP eCLIP16.41■□□□□ 0.224e-7■■■■□ 25.7
MRPL55-205ENST00000366731 STAP2Q9UGK3 403 aa16.41■□□□□ 0.22
MRPL55-205ENST00000366731 FOCADQ5VW36 1801 aa16.41■□□□□ 0.22
MRPL55-205ENST00000366731 MINDY4BA8MYZ0 360 aa16.4■□□□□ 0.22
MRPL55-205ENST00000366731 CDK8P49336 464 aa16.4■□□□□ 0.22
MRPL55-205ENST00000366731 USP17L2Q6R6M4 530 aa16.4■□□□□ 0.22
MRPL55-205ENST00000366731 CHD1LQ86WJ1 897 aa16.4■□□□□ 0.22
MRPL55-205ENST00000366731 SWAP70Q9UH65 585 aa16.4■□□□□ 0.22
MRPL55-205ENST00000366731 PHIPQ8WWQ0 1821 aa16.4■□□□□ 0.22
MRPL55-205ENST00000366731 PEX10O60683 326 aa16.39■□□□□ 0.21
MRPL55-205ENST00000366731 AKR1B1P15121 316 aa16.39■□□□□ 0.21
MRPL55-205ENST00000366731 FCGRTP55899 365 aa16.39■□□□□ 0.21
MRPL55-205ENST00000366731 CCDC129Q6ZRS4 1044 aa16.39■□□□□ 0.21
MRPL55-205ENST00000366731 CLEC10AQ8IUN9 316 aa16.39■□□□□ 0.21
MRPL55-205ENST00000366731 P2RX7Q99572 595 aaKnown RBP16.39■□□□□ 0.21
MRPL55-205ENST00000366731 TRIM6-TRIM34B2RNG4 842 aa16.38■□□□□ 0.21
MRPL55-205ENST00000366731 HOXD10P28358 340 aa16.38■□□□□ 0.21
MRPL55-205ENST00000366731 TDO2P48775 406 aa16.38■□□□□ 0.21
MRPL55-205ENST00000366731 NUCB1Q02818 461 aa16.38■□□□□ 0.21
MRPL55-205ENST00000366731 SLC9C1Q4G0N8 1177 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms