RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 LRRC24Q50LG9 513 aa13.57□□□□□ -0.24
CSNK1E-202ENST00000366216 CASC1Q6TDU7 716 aa13.57□□□□□ -0.24
CSNK1E-202ENST00000366216 AACSQ86V21 672 aa13.57□□□□□ -0.24
CSNK1E-202ENST00000366216 VGLL2Q8N8G2 317 aa13.57□□□□□ -0.24
CSNK1E-202ENST00000366216 FAM151AQ8WW52 585 aa13.57□□□□□ -0.24
CSNK1E-202ENST00000366216 DDRGK1Q96HY6 314 aa13.57□□□□□ -0.24
CSNK1E-202ENST00000366216 IPO9Q96P70 1041 aaKnown RBP13.57□□□□□ -0.24
CSNK1E-202ENST00000366216 GPR108Q9NPR9 543 aa13.57□□□□□ -0.24
CSNK1E-202ENST00000366216 ECHDC1Q9NTX5 307 aa13.57□□□□□ -0.24
CSNK1E-202ENST00000366216 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.57□□□□□ -0.24
CSNK1E-202ENST00000366216 SLC45A1Q9Y2W3 748 aa13.57□□□□□ -0.24
CSNK1E-202ENST00000366216 MAST3O60307 1309 aa13.57□□□□□ -0.24
CSNK1E-202ENST00000366216 RLFQ13129 1914 aa13.56□□□□□ -0.24
CSNK1E-202ENST00000366216 A0A0G2JLL6 359 aaPredicted RBP13.56□□□□□ -0.24
CSNK1E-202ENST00000366216 EYA2O00167 538 aa13.56□□□□□ -0.24
CSNK1E-202ENST00000366216 TCP10Q12799 353 aa13.56□□□□□ -0.24
CSNK1E-202ENST00000366216 TRIM32Q13049 653 aa13.56□□□□□ -0.24
CSNK1E-202ENST00000366216 ATG9AQ7Z3C6 839 aa13.56□□□□□ -0.24
CSNK1E-202ENST00000366216 PRRT2Q7Z6L0 340 aaPredicted RBP13.56□□□□□ -0.24
CSNK1E-202ENST00000366216 VPS37DQ86XT2 251 aa13.56□□□□□ -0.24
CSNK1E-202ENST00000366216 SMCR8Q8TEV9 937 aaPredicted RBP13.56□□□□□ -0.24
CSNK1E-202ENST00000366216 EAF2Q96CJ1 260 aaPredicted RBP13.56□□□□□ -0.24
CSNK1E-202ENST00000366216 HMX1Q9NP08 348 aaPredicted RBP13.56□□□□□ -0.24
CSNK1E-202ENST00000366216 FAM198AQ9UFP1 575 aa13.56□□□□□ -0.24
CSNK1E-202ENST00000366216 MYO9BQ13459 2157 aa13.56□□□□□ -0.24
CSNK1E-202ENST00000366216 PHF20L1A8MW92 1017 aa13.55□□□□□ -0.24
CSNK1E-202ENST00000366216 FRAT2O75474 233 aaPredicted RBP13.55□□□□□ -0.24
CSNK1E-202ENST00000366216 MFAP1P55081 439 aaKnown RBP13.55□□□□□ -0.24
CSNK1E-202ENST00000366216 TNNI3KQ59H18 835 aa13.55□□□□□ -0.24
CSNK1E-202ENST00000366216 TSHZ3Q63HK5 1081 aa13.55□□□□□ -0.24
CSNK1E-202ENST00000366216 CDC42EP5Q6NZY7 148 aa13.55□□□□□ -0.24
CSNK1E-202ENST00000366216 HHIPL2Q6UWX4 724 aa13.55□□□□□ -0.24
CSNK1E-202ENST00000366216 GADL1Q6ZQY3 521 aa13.55□□□□□ -0.24
CSNK1E-202ENST00000366216 ANKRD13CQ8N6S4 541 aa13.55□□□□□ -0.24
CSNK1E-202ENST00000366216 FPGT-TNNI3KV9GXZ4 949 aa13.55□□□□□ -0.24
CSNK1E-202ENST00000366216 PFASO15067 1338 aa13.55□□□□□ -0.24
CSNK1E-202ENST00000366216 BDP1A6H8Y1 2624 aa13.55□□□□□ -0.24
CSNK1E-202ENST00000366216 COL9A1P20849 921 aa13.54□□□□□ -0.24
CSNK1E-202ENST00000366216 MDM2Q00987 491 aaPredicted RBP13.54□□□□□ -0.24
CSNK1E-202ENST00000366216 TFCP2Q12800 502 aa13.54□□□□□ -0.24
CSNK1E-202ENST00000366216 DIXDC1Q155Q3 683 aa13.54□□□□□ -0.24
CSNK1E-202ENST00000366216 ZNF697Q5TEC3 545 aa13.54□□□□□ -0.24
CSNK1E-202ENST00000366216 SH3BP5LQ7L8J4 393 aa13.54□□□□□ -0.24
CSNK1E-202ENST00000366216 CCDC84Q86UT8 332 aaPredicted RBP13.54□□□□□ -0.24
CSNK1E-202ENST00000366216 MAFAQ8NHW3 353 aaPredicted RBP13.54□□□□□ -0.24
CSNK1E-202ENST00000366216 C22orf23Q9BZE7 217 aa13.54□□□□□ -0.24
CSNK1E-202ENST00000366216 OGDHLQ9ULD0 1010 aa13.54□□□□□ -0.24
CSNK1E-202ENST00000366216 SUGT1Q9Y2Z0 365 aa13.54□□□□□ -0.24
CSNK1E-202ENST00000366216 DAGLAQ9Y4D2 1042 aa13.54□□□□□ -0.24
CSNK1E-202ENST00000366216 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.54□□□□□ -0.24
CSNK1E-202ENST00000366216 ZHX2Q9Y6X8 837 aa13.54□□□□□ -0.24
CSNK1E-202ENST00000366216 TRIM6-TRIM34B2RNG4 842 aa13.53□□□□□ -0.24
CSNK1E-202ENST00000366216 PTPRAP18433 802 aa13.53□□□□□ -0.24
CSNK1E-202ENST00000366216 RBM25P49756 843 aaKnown RBP13.53□□□□□ -0.24
CSNK1E-202ENST00000366216 SCYL3Q8IZE3 742 aa13.53□□□□□ -0.24
CSNK1E-202ENST00000366216 SYMPKQ92797 1274 aaKnown RBP13.53□□□□□ -0.24
CSNK1E-202ENST00000366216 PICK1Q9NRD5 415 aa13.53□□□□□ -0.24
CSNK1E-202ENST00000366216 AFG3L2Q9Y4W6 797 aa13.53□□□□□ -0.24
CSNK1E-202ENST00000366216 FGFR2P21802 821 aa13.52□□□□□ -0.25
CSNK1E-202ENST00000366216 FAM110CQ1W6H9 321 aa13.52□□□□□ -0.25
CSNK1E-202ENST00000366216 CAVIN4Q5BKX8 364 aa13.52□□□□□ -0.25
CSNK1E-202ENST00000366216 CDX2Q99626 313 aaPredicted RBP13.52□□□□□ -0.25
CSNK1E-202ENST00000366216 CCDC8Q9H0W5 538 aaPredicted RBP13.52□□□□□ -0.25
CSNK1E-202ENST00000366216 MROH5Q6ZUA9 1318 aa13.51□□□□□ -0.25
CSNK1E-202ENST00000366216 COL6A1P12109 1028 aa13.51□□□□□ -0.25
CSNK1E-202ENST00000366216 CHMLP26374 656 aa13.51□□□□□ -0.25
CSNK1E-202ENST00000366216 RILPL2Q969X0 211 aa13.51□□□□□ -0.25
CSNK1E-202ENST00000366216 CEP126Q9P2H0 1117 aa13.51□□□□□ -0.25
CSNK1E-202ENST00000366216 GJD2Q9UKL4 321 aa13.51□□□□□ -0.25
CSNK1E-202ENST00000366216 AGTPBP1Q9UPW5 1226 aa13.51□□□□□ -0.25
CSNK1E-202ENST00000366216 CDK5RAP2Q96SN8 1893 aa13.5□□□□□ -0.25
CSNK1E-202ENST00000366216 RFX7Q2KHR2 1363 aa13.5□□□□□ -0.25
CSNK1E-202ENST00000366216 PEX10O60683 326 aa13.5□□□□□ -0.25
CSNK1E-202ENST00000366216 REC8O95072 547 aa13.5□□□□□ -0.25
CSNK1E-202ENST00000366216 PDE8BO95263 885 aa13.5□□□□□ -0.25
CSNK1E-202ENST00000366216 ATP5JP18859 108 aa13.5□□□□□ -0.25
CSNK1E-202ENST00000366216 LRRC26Q2I0M4 334 aa13.5□□□□□ -0.25
CSNK1E-202ENST00000366216 TREML2Q5T2D2 321 aa13.5□□□□□ -0.25
CSNK1E-202ENST00000366216 EVI5LQ96CN4 794 aa13.5□□□□□ -0.25
CSNK1E-202ENST00000366216 TLR7Q9NYK1 1049 aaKnown RBP13.5□□□□□ -0.25
CSNK1E-202ENST00000366216 DBNLQ9UJU6 430 aaKnown RBP13.5□□□□□ -0.25
CSNK1E-202ENST00000366216 PNMA3Q9UL41 463 aa13.5□□□□□ -0.25
CSNK1E-202ENST00000366216 AKAP2Q9Y2D5 859 aa13.5□□□□□ -0.25
CSNK1E-202ENST00000366216 TRIM75PA6NK02 468 aa13.49□□□□□ -0.25
CSNK1E-202ENST00000366216 EPB41L2O43491 1005 aaKnown RBP13.49□□□□□ -0.25
CSNK1E-202ENST00000366216 PRDX5P30044 214 aa13.49□□□□□ -0.25
CSNK1E-202ENST00000366216 VASPP50552 380 aaPredicted RBP13.49□□□□□ -0.25
CSNK1E-202ENST00000366216 MAP3K10Q02779 954 aa13.49□□□□□ -0.25
CSNK1E-202ENST00000366216 MAP3K21Q5TCX8 1036 aa13.49□□□□□ -0.25
CSNK1E-202ENST00000366216 TRIB2Q92519 343 aa13.49□□□□□ -0.25
CSNK1E-202ENST00000366216 LBHD1Q9BQE6 289 aaPredicted RBP13.49□□□□□ -0.25
CSNK1E-202ENST00000366216 ESYT1Q9BSJ8 1104 aa13.49□□□□□ -0.25
CSNK1E-202ENST00000366216 DDTLA6NHG4 134 aaPredicted RBP13.48□□□□□ -0.25
CSNK1E-202ENST00000366216 PRKAR2AP13861 404 aaKnown RBP13.48□□□□□ -0.25
CSNK1E-202ENST00000366216 GCLCP48506 637 aaPredicted RBP13.48□□□□□ -0.25
CSNK1E-202ENST00000366216 METTL24Q5JXM2 366 aa13.48□□□□□ -0.25
CSNK1E-202ENST00000366216 TICAM2Q86XR7 235 aa13.48□□□□□ -0.25
CSNK1E-202ENST00000366216 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.48□□□□□ -0.25
CSNK1E-202ENST00000366216 DBNDD2Q9BQY9 259 aa13.48□□□□□ -0.25
CSNK1E-202ENST00000366216 USP26Q9BXU7 913 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms