RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 NME2P22392 152 aa3.95□□□□□ -1.78
RNU4-56P-201ENST00000364700 CRKP46108 304 aa3.95□□□□□ -1.78
RNU4-56P-201ENST00000364700 OXCT1P55809 520 aa3.95□□□□□ -1.78
RNU4-56P-201ENST00000364700 ID3Q02535 119 aa3.95□□□□□ -1.78
RNU4-56P-201ENST00000364700 LMNB2Q03252 620 aa3.95□□□□□ -1.78
RNU4-56P-201ENST00000364700 PTPN11Q06124 597 aaPredicted RBP3.95□□□□□ -1.78
RNU4-56P-201ENST00000364700 AOC3Q16853 763 aa3.95□□□□□ -1.78
RNU4-56P-201ENST00000364700 ANGEL2Q5VTE6 544 aaKnown RBP3.95□□□□□ -1.78
RNU4-56P-201ENST00000364700 MPRIPQ6WCQ1 1025 aa3.95□□□□□ -1.78
RNU4-56P-201ENST00000364700 SMYD4Q8IYR2 804 aaPredicted RBP3.95□□□□□ -1.78
RNU4-56P-201ENST00000364700 ZNF654Q8IZM8 581 aa3.95□□□□□ -1.78
RNU4-56P-201ENST00000364700 BCL11AQ9H165 835 aa3.95□□□□□ -1.78
RNU4-56P-201ENST00000364700 PPP4R2Q9NY27 417 aa3.95□□□□□ -1.78
RNU4-56P-201ENST00000364700 PCDHGC5Q9Y5F6 944 aa3.95□□□□□ -1.78
RNU4-56P-201ENST00000364700 SNX11Q9Y5W9 270 aa3.95□□□□□ -1.78
RNU4-56P-201ENST00000364700 LRRC10BA6NIK2 292 aa3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 PF4P02776 101 aa3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 CEACAM5P06731 702 aa3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 ZNF157P51786 506 aaPredicted RBP3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 PAK2Q13177 524 aa3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 CAMK2GQ13555 558 aaPredicted RBP3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 KIF4BQ2VIQ3 1234 aa3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 SCARA3Q6AZY7 606 aa3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 TTBK2Q6IQ55 1244 aa3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 ZSWIM9Q86XI8 627 aa3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 CILP2Q8IUL8 1156 aa3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 GRIN3AQ8TCU5 1115 aa3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 FANCD2OSQ96PS1 177 aa3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 DUSP23Q9BVJ7 150 aa3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 NT5C1AQ9BXI3 368 aa3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 TNKS2Q9H2K2 1166 aa3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 CCDC86Q9H6F5 360 aaKnown RBP3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 DISC1Q9NRI5 854 aa3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 KRT82Q9NSB4 513 aa3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 PCOLCE2Q9UKZ9 415 aa3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 PCDHB5Q9Y5E4 795 aa3.94□□□□□ -1.78
RNU4-56P-201ENST00000364700 KRTAP9-7A8MTY7 169 aa3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 ZNF862O60290 1169 aa3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 CILPO75339 1184 aa3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 TSPAN15O95858 294 aa3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 RLBP1P12271 317 aa3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 ATF4P18848 351 aaPredicted RBP3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 ARNTP27540 789 aa3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 EIF4A3P38919 411 aaKnown RBP3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 RAP1GAPP47736 663 aa3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 RING1Q06587 406 aa3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 FAM196AQ6ZSG2 479 aa3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 ARHGAP27Q6ZUM4 889 aa3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 CCDC84Q86UT8 332 aaPredicted RBP3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 SLITRK4Q8IW52 837 aa3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 SULF2Q8IWU5 870 aa3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 ZNF296Q8WUU4 475 aaPredicted RBP3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 TOX2Q96NM4 488 aa3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 PPP1R16BQ96T49 567 aa3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 GPN3Q9UHW5 284 aaPredicted RBP3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 PLAGL2Q9UPG8 496 aa3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 U3KQE9 123 aa3.93□□□□□ -1.78
RNU4-56P-201ENST00000364700 ZNF503-AS2A6NEH8 195 aa3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 LEFTY1O75610 366 aa3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 F13A1P00488 732 aa3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 GSTP1P09211 210 aaKnown RBP3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 LIG1P18858 919 aa3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 GBP2P32456 591 aaPredicted RBP3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 CD96P40200 585 aa3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 SOX9P48436 509 aa3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 PWP1Q13610 501 aa3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 TTLL4Q14679 1199 aa3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 KCNMB1Q16558 191 aa3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 MAP3K11Q16584 847 aa3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 BNC2Q6ZN30 1099 aaPredicted RBP3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 MCF2L2Q86YR7 1114 aa3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 SIAH1Q8IUQ4 282 aa3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 SREK1Q8WXA9 508 aaKnown RBP3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 ASB11Q8WXH4 323 aa3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 WDR89Q96FK6 387 aaPredicted RBP3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 SPON2Q9BUD6 331 aa3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 CYP8B1Q9UNU6 501 aa3.92□□□□□ -1.78
RNU4-56P-201ENST00000364700 IGF2BP3O00425 579 aaKnown RBP eCLIP3.91□□□□□ -1.78
RNU4-56P-201ENST00000364700 GFRA2O00451 464 aa3.91□□□□□ -1.78
RNU4-56P-201ENST00000364700 RNGTTO60942 597 aaKnown RBP3.91□□□□□ -1.78
RNU4-56P-201ENST00000364700 TRIM37O94972 964 aa3.91□□□□□ -1.78
RNU4-56P-201ENST00000364700 NTF4P34130 210 aa3.91□□□□□ -1.78
RNU4-56P-201ENST00000364700 CDK8P49336 464 aa3.91□□□□□ -1.78
RNU4-56P-201ENST00000364700 FAM160A1Q05DH4 1040 aa3.91□□□□□ -1.78
RNU4-56P-201ENST00000364700 PPP2R3AQ06190 1150 aa3.91□□□□□ -1.78
RNU4-56P-201ENST00000364700 SEPT6Q14141 434 aa3.91□□□□□ -1.78
RNU4-56P-201ENST00000364700 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.91□□□□□ -1.78
RNU4-56P-201ENST00000364700 RELL1Q8IUW5 271 aa3.91□□□□□ -1.78
RNU4-56P-201ENST00000364700 KIAA0825Q8IV33 1275 aa3.91□□□□□ -1.78
RNU4-56P-201ENST00000364700 FBXO27Q8NI29 283 aa3.91□□□□□ -1.78
RNU4-56P-201ENST00000364700 ZSCAN18Q8TBC5 510 aaPredicted RBP3.91□□□□□ -1.78
RNU4-56P-201ENST00000364700 GATAD2BQ8WXI9 593 aa3.91□□□□□ -1.78
RNU4-56P-201ENST00000364700 GPRASP2Q96D09 838 aa3.91□□□□□ -1.78
RNU4-56P-201ENST00000364700 CCSER2Q9H7U1 834 aa3.91□□□□□ -1.78
RNU4-56P-201ENST00000364700 UBP1Q9NZI7 540 aa3.91□□□□□ -1.78
RNU4-56P-201ENST00000364700 PRR36Q9H6K5 1346 aa3.91□□□□□ -1.78
RNU4-56P-201ENST00000364700 ROBO2Q9HCK4 1378 aa3.9□□□□□ -1.78
RNU4-56P-201ENST00000364700 MINDY4BA8MYZ0 360 aa3.9□□□□□ -1.79
RNU4-56P-201ENST00000364700 NEFMP07197 916 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms