RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 P2RX7Q99572 595 aaKnown RBP25.9■■□□□ 1.74
CD47-202ENST00000361309 A0A1W2PPC1 479 aa25.89■■□□□ 1.74
CD47-202ENST00000361309 PEX10O60683 326 aa25.89■■□□□ 1.74
CD47-202ENST00000361309 POLA2Q14181 598 aa25.89■■□□□ 1.74
CD47-202ENST00000361309 METTL16Q86W50 562 aaKnown RBP25.89■■□□□ 1.74
CD47-202ENST00000361309 CRACR2BQ8N4Y2 399 aaPredicted RBP25.89■■□□□ 1.74
CD47-202ENST00000361309 TMEM57Q8N5G2 664 aa25.89■■□□□ 1.74
CD47-202ENST00000361309 ANKLE1Q8NAG6 615 aa25.89■■□□□ 1.74
CD47-202ENST00000361309 TRIM34Q9BYJ4 488 aa25.89■■□□□ 1.74
CD47-202ENST00000361309 PALD1Q9ULE6 856 aa25.89■■□□□ 1.74
CD47-202ENST00000361309 GDF11O95390 407 aa25.88■■□□□ 1.73
CD47-202ENST00000361309 CYP2B6P20813 491 aa25.88■■□□□ 1.73
CD47-202ENST00000361309 HOXA7P31268 230 aaPredicted RBP25.88■■□□□ 1.73
CD47-202ENST00000361309 OS9Q13438 667 aaPredicted RBP25.88■■□□□ 1.73
CD47-202ENST00000361309 FOXP4Q8IVH2 680 aaPredicted RBP25.88■■□□□ 1.73
CD47-202ENST00000361309 TRIB2Q92519 343 aa25.88■■□□□ 1.73
CD47-202ENST00000361309 C19orf81C9J6K1 198 aa25.87■■□□□ 1.73
CD47-202ENST00000361309 CCER2I3L3R5 266 aa25.87■■□□□ 1.73
CD47-202ENST00000361309 HERVK_113P62684 666 aa25.87■■□□□ 1.73
CD47-202ENST00000361309 C7orf61Q8IZ16 206 aa25.87■■□□□ 1.73
CD47-202ENST00000361309 TXNRD2Q9NNW7 524 aa25.87■■□□□ 1.73
CD47-202ENST00000361309 SAP30BPQ9UHR5 308 aaKnown RBP25.87■■□□□ 1.73
CD47-202ENST00000361309 USP17L10C9JJH3 530 aa25.86■■□□□ 1.73
CD47-202ENST00000361309 SOX1O00570 391 aaPredicted RBP25.86■■□□□ 1.73
CD47-202ENST00000361309 ZAP70P43403 619 aa25.86■■□□□ 1.73
CD47-202ENST00000361309 GPRC5AQ8NFJ5 357 aa25.86■■□□□ 1.73
CD47-202ENST00000361309 SSH3Q8TE77 659 aa25.86■■□□□ 1.73
CD47-202ENST00000361309 SURF6O75683 361 aaKnown RBP25.85■■□□□ 1.73
CD47-202ENST00000361309 MNX1P50219 401 aaPredicted RBP25.85■■□□□ 1.73
CD47-202ENST00000361309 ATP8B2P98198 1209 aa25.85■■□□□ 1.73
CD47-202ENST00000361309 NUDT12Q9BQG2 462 aa25.85■■□□□ 1.73
CD47-202ENST00000361309 NBPF3Q9H094 633 aa25.85■■□□□ 1.73
CD47-202ENST00000361309 PIH1D3Q9NQM4 214 aaKnown RBP25.85■■□□□ 1.73
CD47-202ENST00000361309 GINM1Q9NU53 330 aa25.85■■□□□ 1.73
CD47-202ENST00000361309 ZBTB21Q9ULJ3 1066 aa25.85■■□□□ 1.73
CD47-202ENST00000361309 DYNLL1P63167 89 aaKnown RBP25.84■■□□□ 1.73
CD47-202ENST00000361309 ZKSCAN2Q63HK3 967 aa25.84■■□□□ 1.73
CD47-202ENST00000361309 LRCH3Q96II8 777 aa25.84■■□□□ 1.73
CD47-202ENST00000361309 ZNF512BQ96KM6 892 aaPredicted RBP25.84■■□□□ 1.73
CD47-202ENST00000361309 RBPJLQ9UBG7 517 aa25.84■■□□□ 1.73
CD47-202ENST00000361309 COL6A3P12111 3177 aa25.84■■□□□ 1.73
CD47-202ENST00000361309 HLA-DOAP06340 250 aa25.83■■□□□ 1.73
CD47-202ENST00000361309 Q3C1V9 767 aa25.83■■□□□ 1.73
CD47-202ENST00000361309 MAP3K21Q5TCX8 1036 aa25.83■■□□□ 1.73
CD47-202ENST00000361309 SOCS4Q8WXH5 440 aa25.83■■□□□ 1.73
CD47-202ENST00000361309 C11orf49Q9H6J7 331 aa25.83■■□□□ 1.73
CD47-202ENST00000361309 C1orf115Q9H7X2 142 aa25.83■■□□□ 1.73
CD47-202ENST00000361309 OGDHLQ9ULD0 1010 aa25.83■■□□□ 1.73
CD47-202ENST00000361309 ZMYND8Q9ULU4 1186 aaPredicted RBP25.83■■□□□ 1.73
CD47-202ENST00000361309 XRCC5P13010 732 aaKnown RBP25.82■■□□□ 1.72
CD47-202ENST00000361309 PRKAR2AP13861 404 aaKnown RBP25.82■■□□□ 1.72
CD47-202ENST00000361309 EMILIN3Q9NT22 766 aa25.82■■□□□ 1.72
CD47-202ENST00000361309 DBNLQ9UJU6 430 aaKnown RBP25.82■■□□□ 1.72
CD47-202ENST00000361309 IGSF3O75054 1194 aa25.81■■□□□ 1.72
CD47-202ENST00000361309 CYP7A1P22680 504 aa25.81■■□□□ 1.72
CD47-202ENST00000361309 MAPK4P31152 587 aa25.81■■□□□ 1.72
CD47-202ENST00000361309 ERVK-9P63128 1117 aa25.81■■□□□ 1.72
CD47-202ENST00000361309 ERVK-24P63145 666 aa25.81■■□□□ 1.72
CD47-202ENST00000361309 PDE3AQ14432 1141 aa25.81■■□□□ 1.72
CD47-202ENST00000361309 GDF15Q99988 308 aa25.81■■□□□ 1.72
CD47-202ENST00000361309 PAGR1Q9BTK6 254 aa25.81■■□□□ 1.72
CD47-202ENST00000361309 TLR7Q9NYK1 1049 aaKnown RBP25.81■■□□□ 1.72
CD47-202ENST00000361309 FRMPD3Q5JV73 1810 aa25.8■■□□□ 1.72
CD47-202ENST00000361309 BMP8BP34820 402 aa25.8■■□□□ 1.72
CD47-202ENST00000361309 USP17L2Q6R6M4 530 aa25.8■■□□□ 1.72
CD47-202ENST00000361309 CCAR1Q8IX12 1150 aaKnown RBP25.8■■□□□ 1.72
CD47-202ENST00000361309 CCDC8Q9H0W5 538 aaPredicted RBP25.8■■□□□ 1.72
CD47-202ENST00000361309 PORCNQ9H237 461 aa25.8■■□□□ 1.72
CD47-202ENST00000361309 GH2P01242 217 aa25.79■■□□□ 1.72
CD47-202ENST00000361309 ZKSCAN1P17029 563 aaPredicted RBP25.79■■□□□ 1.72
CD47-202ENST00000361309 POTEEQ6S8J3 1075 aa25.79■■□□□ 1.72
CD47-202ENST00000361309 GTF3C2Q8WUA4 911 aaPredicted RBP25.79■■□□□ 1.72
CD47-202ENST00000361309 USP6NLQ92738 828 aa25.79■■□□□ 1.72
CD47-202ENST00000361309 NOP58Q9Y2X3 529 aaKnown RBP25.79■■□□□ 1.72
CD47-202ENST00000361309 IDH1O75874 414 aaKnown RBP25.78■■□□□ 1.72
CD47-202ENST00000361309 SYN1P17600 705 aa25.78■■□□□ 1.72
CD47-202ENST00000361309 CACNB2Q08289 660 aaPredicted RBP25.78■■□□□ 1.72
CD47-202ENST00000361309 GPR142Q7Z601 462 aa25.78■■□□□ 1.72
CD47-202ENST00000361309 TRMT44Q8IYL2 757 aaKnown RBP25.78■■□□□ 1.72
CD47-202ENST00000361309 MIGA1Q8NAN2 632 aa25.78■■□□□ 1.72
CD47-202ENST00000361309 RGS2P41220 211 aa25.77■■□□□ 1.72
CD47-202ENST00000361309 USP5P45974 858 aa25.77■■□□□ 1.72
CD47-202ENST00000361309 ZYXQ15942 572 aaKnown RBP25.77■■□□□ 1.72
CD47-202ENST00000361309 CCL14Q16627 93 aa25.77■■□□□ 1.72
CD47-202ENST00000361309 MORN1Q5T089 497 aa25.77■■□□□ 1.72
CD47-202ENST00000361309 PLEKHH3Q7Z736 793 aa25.77■■□□□ 1.72
CD47-202ENST00000361309 EAF2Q96CJ1 260 aaPredicted RBP25.77■■□□□ 1.72
CD47-202ENST00000361309 DNAH12Q6ZR08 3092 aa25.77■■□□□ 1.72
CD47-202ENST00000361309 PFASO15067 1338 aa25.77■■□□□ 1.72
CD47-202ENST00000361309 TATDN1Q6P1N9 297 aa25.76■■□□□ 1.71
CD47-202ENST00000361309 MAGEB6Q8N7X4 407 aa25.76■■□□□ 1.71
CD47-202ENST00000361309 FEZ1Q99689 392 aa25.76■■□□□ 1.71
CD47-202ENST00000361309 NDUFB9Q9Y6M9 179 aa25.76■■□□□ 1.71
CD47-202ENST00000361309 CCND3P30281 292 aaPredicted RBP25.75■■□□□ 1.71
CD47-202ENST00000361309 FTSJ3Q8IY81 847 aaKnown RBP25.75■■□□□ 1.71
CD47-202ENST00000361309 C12orf42Q96LP6 360 aa25.75■■□□□ 1.71
CD47-202ENST00000361309 MAGEA10P43363 369 aaPredicted RBP25.74■■□□□ 1.71
CD47-202ENST00000361309 CERS3Q8IU89 383 aa25.74■■□□□ 1.71
CD47-202ENST00000361309 ITPRIPQ8IWB1 547 aa25.74■■□□□ 1.71
CD47-202ENST00000361309 SLC17A8Q8NDX2 589 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms