RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 ZKSCAN3Q9BRR0 538 aa15.34■□□□□ 0.05
SQSTM1-201ENST00000360718 ANGEL1Q9UNK9 670 aaKnown RBP15.34■□□□□ 0.05
SQSTM1-201ENST00000360718 CNPY2Q9Y2B0 182 aa15.34■□□□□ 0.05
SQSTM1-201ENST00000360718 SHTN1A0MZ66 631 aa15.34■□□□□ 0.05
SQSTM1-201ENST00000360718 ERICH2A1L162 156 aa15.34■□□□□ 0.05
SQSTM1-201ENST00000360718 SLC44A5Q8NCS7 719 aa15.34■□□□□ 0.05
SQSTM1-201ENST00000360718 JDP2Q8WYK2 163 aa15.34■□□□□ 0.05
SQSTM1-201ENST00000360718 GTF3C6Q969F1 213 aa15.34■□□□□ 0.05
SQSTM1-201ENST00000360718 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.34■□□□□ 0.05
SQSTM1-201ENST00000360718 SBF1O95248 1867 aa15.34■□□□□ 0.05
SQSTM1-201ENST00000360718 SH2B2O14492 632 aaPredicted RBP15.33■□□□□ 0.05
SQSTM1-201ENST00000360718 POLR3DP05423 398 aaPredicted RBP15.33■□□□□ 0.05
SQSTM1-201ENST00000360718 GJB2P29033 226 aa15.33■□□□□ 0.05
SQSTM1-201ENST00000360718 CFAP100Q494V2 611 aa15.33■□□□□ 0.05
SQSTM1-201ENST00000360718 ZFPM1Q8IX07 1006 aa15.33■□□□□ 0.05
SQSTM1-201ENST00000360718 PRMT6Q96LA8 375 aaPredicted RBP15.33■□□□□ 0.05
SQSTM1-201ENST00000360718 MTA3Q9BTC8 594 aa15.33■□□□□ 0.05
SQSTM1-201ENST00000360718 ROBO3Q96MS0 1386 aa15.33■□□□□ 0.04
SQSTM1-201ENST00000360718 IFIT3O14879 490 aaKnown RBP15.33■□□□□ 0.04
SQSTM1-201ENST00000360718 PFKFB2O60825 505 aa15.33■□□□□ 0.04
SQSTM1-201ENST00000360718 EVCP57679 992 aa15.33■□□□□ 0.04
SQSTM1-201ENST00000360718 TMEM67Q5HYA8 995 aa15.33■□□□□ 0.04
SQSTM1-201ENST00000360718 RAB11FIP4Q86YS3 637 aa15.33■□□□□ 0.04
SQSTM1-201ENST00000360718 UBAC1Q9BSL1 405 aa15.33■□□□□ 0.04
SQSTM1-201ENST00000360718 RANBP6O60518 1105 aaKnown RBP15.32■□□□□ 0.04
SQSTM1-201ENST00000360718 YBX3P16989 372 aaKnown RBP eCLIP15.32■□□□□ 0.044e-6■□□□□ 11.2
SQSTM1-201ENST00000360718 PDIA3P30101 505 aaKnown RBP15.32■□□□□ 0.04
SQSTM1-201ENST00000360718 NT5C2P49902 561 aa15.32■□□□□ 0.04
SQSTM1-201ENST00000360718 SCRN1Q12765 414 aa15.32■□□□□ 0.04
SQSTM1-201ENST00000360718 CIAPIN1Q6FI81 312 aa15.32■□□□□ 0.04
SQSTM1-201ENST00000360718 TDRD3Q9H7E2 651 aaKnown RBP15.32■□□□□ 0.04
SQSTM1-201ENST00000360718 LY9Q9HBG7 655 aa15.32■□□□□ 0.04
SQSTM1-201ENST00000360718 ZNF287Q9HBT7 754 aa15.32■□□□□ 0.04
SQSTM1-201ENST00000360718 KLF18A0A0U1RQI7 1052 aa15.32■□□□□ 0.04
SQSTM1-201ENST00000360718 ORC4O43929 436 aa15.32■□□□□ 0.04
SQSTM1-201ENST00000360718 SLURP2P0DP57 97 aa15.32■□□□□ 0.04
SQSTM1-201ENST00000360718 NFXL1Q6ZNB6 911 aa15.32■□□□□ 0.04
SQSTM1-201ENST00000360718 ARHGAP27Q6ZUM4 889 aa15.32■□□□□ 0.04
SQSTM1-201ENST00000360718 NCOA5Q9HCD5 579 aaKnown RBP15.32■□□□□ 0.04
SQSTM1-201ENST00000360718 FAM198AQ9UFP1 575 aa15.32■□□□□ 0.04
SQSTM1-201ENST00000360718 HPS5Q9UPZ3 1129 aa15.32■□□□□ 0.04
SQSTM1-201ENST00000360718 SIPA1L1O43166 1804 aa15.31■□□□□ 0.04
SQSTM1-201ENST00000360718 DICER1Q9UPY3 1922 aaKnown RBP15.31■□□□□ 0.04
SQSTM1-201ENST00000360718 FZD9O00144 591 aa15.31■□□□□ 0.04
SQSTM1-201ENST00000360718 FAM47AQ5JRC9 791 aa15.31■□□□□ 0.04
SQSTM1-201ENST00000360718 IQCA1Q86XH1 822 aa15.31■□□□□ 0.04
SQSTM1-201ENST00000360718 TMTC2Q8N394 836 aa15.31■□□□□ 0.04
SQSTM1-201ENST00000360718 HDAC9Q9UKV0 1011 aa15.31■□□□□ 0.04
SQSTM1-201ENST00000360718 DHX16O60231 1041 aaKnown RBP15.31■□□□□ 0.04
SQSTM1-201ENST00000360718 NMT2O60551 498 aa15.31■□□□□ 0.04
SQSTM1-201ENST00000360718 PDCP20941 246 aa15.31■□□□□ 0.04
SQSTM1-201ENST00000360718 LIFRP42702 1097 aa15.31■□□□□ 0.04
SQSTM1-201ENST00000360718 CCT2P78371 535 aaKnown RBP15.31■□□□□ 0.04
SQSTM1-201ENST00000360718 SYNE3Q6ZMZ3 975 aa15.31■□□□□ 0.04
SQSTM1-201ENST00000360718 AGBL3Q8NEM8 1001 aa15.31■□□□□ 0.04
SQSTM1-201ENST00000360718 LLPHQ9BRT6 129 aaKnown RBP15.31■□□□□ 0.04
SQSTM1-201ENST00000360718 OSBPL5Q9H0X9 879 aaPredicted RBP15.31■□□□□ 0.04
SQSTM1-201ENST00000360718 MTMR6Q9Y217 621 aa15.31■□□□□ 0.04
SQSTM1-201ENST00000360718 ZNF541Q9H0D2 1346 aa15.31■□□□□ 0.04
SQSTM1-201ENST00000360718 SPDYE2BA6NHP3 402 aa15.3■□□□□ 0.04
SQSTM1-201ENST00000360718 CCDC69A6NI79 296 aa15.3■□□□□ 0.04
SQSTM1-201ENST00000360718 GOLGA8BA8MQT2 603 aa15.3■□□□□ 0.04
SQSTM1-201ENST00000360718 SPDYE6P0CI01 402 aa15.3■□□□□ 0.04
SQSTM1-201ENST00000360718 TCP10Q12799 353 aa15.3■□□□□ 0.04
SQSTM1-201ENST00000360718 WTAPQ15007 396 aa15.3■□□□□ 0.04
SQSTM1-201ENST00000360718 OGFOD1Q8N543 542 aa15.3■□□□□ 0.04
SQSTM1-201ENST00000360718 MKNK2Q9HBH9 465 aa15.3■□□□□ 0.04
SQSTM1-201ENST00000360718 R3HCC1Q9Y3T6 440 aaKnown RBP15.3■□□□□ 0.04
SQSTM1-201ENST00000360718 TCHHQ07283 1943 aa15.3■□□□□ 0.04
SQSTM1-201ENST00000360718 FIBPO43427 364 aa15.29■□□□□ 0.04
SQSTM1-201ENST00000360718 CTDNEP1O95476 244 aa15.29■□□□□ 0.04
SQSTM1-201ENST00000360718 SEC23AQ15436 765 aa15.29■□□□□ 0.04
SQSTM1-201ENST00000360718 SGMS1Q86VZ5 419 aa15.29■□□□□ 0.04
SQSTM1-201ENST00000360718 MYH6P13533 1939 aa15.29■□□□□ 0.04
SQSTM1-201ENST00000360718 TNKSO95271 1327 aa15.29■□□□□ 0.04
SQSTM1-201ENST00000360718 JAK2O60674 1132 aa15.29■□□□□ 0.04
SQSTM1-201ENST00000360718 PPFIA3O75145 1194 aa15.29■□□□□ 0.04
SQSTM1-201ENST00000360718 EGFRP00533 1210 aa15.29■□□□□ 0.04
SQSTM1-201ENST00000360718 RXRAP19793 462 aa15.29■□□□□ 0.04
SQSTM1-201ENST00000360718 C16orf86Q6ZW13 317 aa15.29■□□□□ 0.04
SQSTM1-201ENST00000360718 SH3BP5LQ7L8J4 393 aa15.29■□□□□ 0.04
SQSTM1-201ENST00000360718 TTC6Q86TZ1 520 aa15.29■□□□□ 0.04
SQSTM1-201ENST00000360718 MYL10Q9BUA6 226 aa15.29■□□□□ 0.04
SQSTM1-201ENST00000360718 IDI2Q9BXS1 227 aa15.29■□□□□ 0.04
SQSTM1-201ENST00000360718 KIF3AQ9Y496 699 aa15.29■□□□□ 0.04
SQSTM1-201ENST00000360718 CDK8P49336 464 aa15.28■□□□□ 0.04
SQSTM1-201ENST00000360718 TNIP1Q15025 636 aa15.28■□□□□ 0.04
SQSTM1-201ENST00000360718 APOA5Q6Q788 366 aa15.28■□□□□ 0.04
SQSTM1-201ENST00000360718 ENAHQ8N8S7 591 aaPredicted RBP15.28■□□□□ 0.04
SQSTM1-201ENST00000360718 SLC12A7Q9Y666 1083 aa15.28■□□□□ 0.04
SQSTM1-201ENST00000360718 CLRN2A0PK11 232 aa15.28■□□□□ 0.04
SQSTM1-201ENST00000360718 DDTLA6NHG4 134 aaPredicted RBP15.28■□□□□ 0.04
SQSTM1-201ENST00000360718 TSPY2A6NKD2 308 aa15.28■□□□□ 0.04
SQSTM1-201ENST00000360718 ZBTB43O43298 467 aa15.28■□□□□ 0.04
SQSTM1-201ENST00000360718 RASA1P20936 1047 aa15.28■□□□□ 0.04
SQSTM1-201ENST00000360718 HMGN5P82970 282 aaKnown RBP15.28■□□□□ 0.04
SQSTM1-201ENST00000360718 GABPAQ06546 454 aa15.28■□□□□ 0.04
SQSTM1-201ENST00000360718 LARP1BQ659C4 914 aaKnown RBP15.28■□□□□ 0.04
SQSTM1-201ENST00000360718 ZNF444Q8N0Y2 327 aaPredicted RBP15.28■□□□□ 0.04
SQSTM1-201ENST00000360718 ZSCAN10Q96SZ4 725 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms