RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 KIFC2Q96AC6 838 aa14.87□□□□□ -0.03
CCDC144A-203ENST00000360495 LRRC23Q53EV4 343 aaPredicted RBP14.86□□□□□ -0.03
CCDC144A-203ENST00000360495 HELLSQ9NRZ9 838 aa14.86□□□□□ -0.03
CCDC144A-203ENST00000360495 WASLO00401 505 aaPredicted RBP14.86□□□□□ -0.03
CCDC144A-203ENST00000360495 DTNBO60941 627 aa14.86□□□□□ -0.03
CCDC144A-203ENST00000360495 KCTD16Q68DU8 428 aa14.86□□□□□ -0.03
CCDC144A-203ENST00000360495 PSDA5PKW4 1024 aaPredicted RBP14.86□□□□□ -0.03
CCDC144A-203ENST00000360495 COPS6Q7L5N1 327 aa14.86□□□□□ -0.03
CCDC144A-203ENST00000360495 DIS3L2Q8IYB7 885 aaKnown RBP14.86□□□□□ -0.03
CCDC144A-203ENST00000360495 GPT2Q8TD30 523 aa14.86□□□□□ -0.03
CCDC144A-203ENST00000360495 TFCP2Q12800 502 aa14.86□□□□□ -0.03
CCDC144A-203ENST00000360495 PNOCQ13519 176 aa14.86□□□□□ -0.03
CCDC144A-203ENST00000360495 PIK3AP1Q6ZUJ8 805 aa14.86□□□□□ -0.03
CCDC144A-203ENST00000360495 FCHSD1Q86WN1 690 aa14.86□□□□□ -0.03
CCDC144A-203ENST00000360495 CCDC13Q8IYE1 715 aa14.86□□□□□ -0.03
CCDC144A-203ENST00000360495 P3H4Q92791 437 aa14.86□□□□□ -0.03
CCDC144A-203ENST00000360495 WDR44Q5JSH3 913 aa14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 CCDC197Q8NCU1 140 aa14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 CXorf38Q8TB03 319 aa14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 TCP11Q8WWU5 503 aa14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 STX10O60499 249 aa14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 RRAGAQ7L523 313 aa14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 CCDC84Q86UT8 332 aaPredicted RBP14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 LRRC43Q8N309 656 aa14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 OR8K1Q8NGG5 319 aa14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 ABTB1Q969K4 478 aaPredicted RBP14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 C2CD5Q86YS7 1000 aa14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 FAM207AQ9NSI2 230 aaPredicted RBP14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 MCTP2Q6DN12 878 aa14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 PPP1R13BQ96KQ4 1090 aa14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 TEX13AQ9BXU3 409 aaPredicted RBP14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 KIAA1468Q9P260 1216 aa14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 NUTM2BA6NNL0 878 aaPredicted RBP14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 NUTM2EB1AL46 878 aaPredicted RBP14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 CALUO43852 315 aaPredicted RBP14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 BIRC3Q13489 604 aa14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 CCDC152Q4G0S7 254 aa14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 SRGAP1Q7Z6B7 1085 aa14.85□□□□□ -0.03
CCDC144A-203ENST00000360495 MSH6P52701 1360 aa14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 SGSM2O43147 1006 aa14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 MAGEB6Q8N7X4 407 aa14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 MIGA1Q8NAN2 632 aa14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 EXOC4Q96A65 974 aa14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 THEGQ9P2T0 379 aa14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 POLKQ9UBT6 870 aa14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 KRIT1O00522 736 aa14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 KCNK3O14649 394 aa14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 PPFIA2O75334 1257 aa14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 HNRNPH2P55795 449 aaKnown RBP14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 IFNL2Q8IZJ0 200 aa14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 NR1I2O75469 434 aa14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 SUN1O94901 812 aa14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 FBLN1P23142 703 aa14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 POLE2P56282 527 aa14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 TTC38Q5R3I4 469 aa14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 NUCKS1Q9H1E3 243 aaKnown RBP14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 DNMBPQ6XZF7 1577 aa14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 LINS1Q8NG48 757 aa14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 IQCDQ96DY2 449 aa14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 BICC1Q9H694 974 aaKnown RBP14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 AMFRQ9UKV5 643 aa14.84□□□□□ -0.03
CCDC144A-203ENST00000360495 TCP1P17987 556 aaKnown RBP14.83□□□□□ -0.03
CCDC144A-203ENST00000360495 DPH5Q9H2P9 285 aa14.83□□□□□ -0.03
CCDC144A-203ENST00000360495 JAK2O60674 1132 aa14.83□□□□□ -0.04
CCDC144A-203ENST00000360495 TMEM87BQ96K49 555 aa14.83□□□□□ -0.04
CCDC144A-203ENST00000360495 HAUS4Q9H6D7 363 aa14.83□□□□□ -0.04
CCDC144A-203ENST00000360495 POLR3AO14802 1390 aaPredicted RBP14.83□□□□□ -0.04
CCDC144A-203ENST00000360495 B4E1Z4 1266 aa14.83□□□□□ -0.04
CCDC144A-203ENST00000360495 MX2P20592 715 aa14.83□□□□□ -0.04
CCDC144A-203ENST00000360495 AEBP2Q6ZN18 517 aaPredicted RBP14.83□□□□□ -0.04
CCDC144A-203ENST00000360495 CDC23Q9UJX2 597 aa14.83□□□□□ -0.04
CCDC144A-203ENST00000360495 USTQ9Y2C2 406 aa14.83□□□□□ -0.04
CCDC144A-203ENST00000360495 SNAPC4Q5SXM2 1469 aa14.83□□□□□ -0.04
CCDC144A-203ENST00000360495 ICE2Q659A1 982 aa14.83□□□□□ -0.04
CCDC144A-203ENST00000360495 MAIP1Q8WWC4 291 aa14.83□□□□□ -0.04
CCDC144A-203ENST00000360495 SERPINB6P35237 376 aa14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 NBPF14Q5TI25 921 aa14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 HVCN1Q96D96 273 aa14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 NLRC4Q9NPP4 1024 aa14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 FAM135AQ9P2D6 1515 aa14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 GIPC1O14908 333 aa14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 FNBP1Q96RU3 617 aa14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 NAP1L4Q99733 375 aaKnown RBP14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 ZBTB21Q9ULJ3 1066 aa14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 RAD51AP2Q09MP3 1159 aa14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 HINFPQ9BQA5 517 aa14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 SYNJ1O43426 1573 aa14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 TAF11Q15544 211 aa14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 MCM9Q9NXL9 1143 aa14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 SCOCQ9UIL1 159 aa14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 ABCC5O15440 1437 aa14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 PTPN23Q9H3S7 1636 aa14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 LAMC3Q9Y6N6 1575 aa14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 ADALQ6DHV7 355 aa14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 UHMK1Q8TAS1 419 aaKnown RBP14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 BLZF1Q9H2G9 400 aa14.82□□□□□ -0.04
CCDC144A-203ENST00000360495 CCDC169A6NNP5 214 aa14.81□□□□□ -0.04
CCDC144A-203ENST00000360495 KRT40Q6A162 431 aa14.81□□□□□ -0.04
CCDC144A-203ENST00000360495 ATP2A3Q93084 1043 aa14.81□□□□□ -0.04
CCDC144A-203ENST00000360495 SERTAD1Q9UHV2 236 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms