RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 SEMA3EO15041 775 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 POLR3DP05423 398 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-202ENST00000359366 NPR1P16066 1061 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 GNAT2P19087 354 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 GUCY1A2P33402 732 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 USP5P45974 858 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 METAP2P50579 478 aaKnown RBP eCLIP5.94□□□□□ -1.46
ATXN3-202ENST00000359366 TERF1P54274 439 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 TTC6Q86TZ1 520 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 ZNF710Q8N1W2 664 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 CERS5Q8N5B7 392 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 STAG1Q8WVM7 1258 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 STK32BQ9NY57 414 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 ORC3Q9UBD5 711 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-202ENST00000359366 ATP6V0A2Q9Y487 856 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 ADAMTSL1Q8N6G6 1762 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 SALL1Q9NSC2 1324 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 CCDC69A6NI79 296 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 GOLGA8AA7E2F4 631 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 XRCC6P12956 609 aaKnown RBP eCLIP5.93□□□□□ -1.46
ATXN3-202ENST00000359366 BTDP43251 543 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 FAM193AP78312 1265 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 SLC20A2Q08357 652 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 RESTQ13127 1097 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 SKOR2Q2VWA4 1001 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-202ENST00000359366 RASGRP2Q7LDG7 609 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 SP8Q8IXZ3 490 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 WDR66Q8TBY9 1149 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 PLCD4Q9BRC7 762 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 CRNKL1Q9BZJ0 848 aaKnown RBP5.93□□□□□ -1.46
ATXN3-202ENST00000359366 FAM217BQ9NTX9 383 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-202ENST00000359366 SLC12A7Q9Y666 1083 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 TNKSO95271 1327 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 G3V3G9 751 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 ZBTB43O43298 467 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 ZBTB7AO95365 584 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 PDCP20941 246 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 PDE6BP35913 854 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 PLCD1P51178 756 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 CACNB3P54284 484 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 PICALMQ13492 652 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 WTAPQ15007 396 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 DCAF8Q5TAQ9 597 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 ENAHQ8N8S7 591 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-202ENST00000359366 MASTLQ96GX5 879 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 UBAC1Q9BSL1 405 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 SLC26A6Q9BXS9 759 aa5.93□□□□□ -1.46
ATXN3-202ENST00000359366 ZC3H12CQ9C0D7 883 aaKnown RBP5.93□□□□□ -1.46
ATXN3-202ENST00000359366 PPP1R1BQ9UD71 204 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-202ENST00000359366 DUOX1Q9NRD9 1551 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 FSD2A1L4K1 749 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 USP17L3A6NCW0 530 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 USP17L4A6NCW7 530 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 KIF28PB7ZC32 967 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 H0YIN7 160 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 C21orf2O43822 256 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 IL1R1P14778 569 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 EVCP57679 992 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 CAMK4Q16566 473 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 AOC3Q16853 763 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 USP17L1Q7RTZ2 530 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 RNF214Q8ND24 703 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 C8orf76Q96K31 380 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 LLPHQ9BRT6 129 aaKnown RBP5.92□□□□□ -1.46
ATXN3-202ENST00000359366 RTFDC1Q9BY42 306 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-202ENST00000359366 KRT23Q9C075 422 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 SCN9AQ15858 1988 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 MROH7-TTC4A0A0A0MT08 1334 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 ZMYM6O95789 1325 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 PLEKHA8P1O95397 391 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 LIG1P18858 919 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 SF3B2Q13435 895 aaKnown RBP5.92□□□□□ -1.46
ATXN3-202ENST00000359366 SPTY2D1Q68D10 685 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-202ENST00000359366 KIAA0825Q8IV33 1275 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 FLAD1Q8NFF5 587 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 USP28Q96RU2 1077 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 ALG1Q9BT22 464 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 CNNM2Q9H8M5 875 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 KCNJ14Q9UNX9 436 aa5.92□□□□□ -1.46
ATXN3-202ENST00000359366 LTBP1Q14766 1721 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 TIAM2Q8IVF5 1701 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 NRXN2Q9P2S2 1712 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 CDK5RAP2Q96SN8 1893 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 ERICH2A1L162 156 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 RGS20O76081 388 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 ALDH1B1P30837 517 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 KRT85P78386 507 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 HMGN5P82970 282 aaKnown RBP5.91□□□□□ -1.46
ATXN3-202ENST00000359366 NTRK3Q16288 839 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 VARS2Q5ST30 1063 aaKnown RBP5.91□□□□□ -1.46
ATXN3-202ENST00000359366 CLEC10AQ8IUN9 316 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 TEX11Q8IYF3 940 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 ZNF654Q8IZM8 581 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 ZNF687Q8N1G0 1237 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 LEO1Q8WVC0 666 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-202ENST00000359366 ESR2Q92731 530 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 PGBD1Q96JS3 809 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 TMEM87BQ96K49 555 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 SPATA32Q96LK8 384 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 ZSCAN10Q96SZ4 725 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms