RNA–Protein interactions for RNA: ENST00000358506.6

PPP1CB-202, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PPP1CB, Length 4,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-202ENST00000358506 KRT25Q7Z3Z0 450 aa18.71■□□□□ 0.59
PPP1CB-202ENST00000358506 VPS16Q9H269 839 aa18.71■□□□□ 0.59
PPP1CB-202ENST00000358506 CEP170BQ9Y4F5 1589 aaPredicted RBP18.71■□□□□ 0.59
PPP1CB-202ENST00000358506 SEMA3EO15041 775 aa18.7■□□□□ 0.58
PPP1CB-202ENST00000358506 TUBB4AP04350 444 aa18.7■□□□□ 0.58
PPP1CB-202ENST00000358506 USP8P40818 1118 aa18.7■□□□□ 0.58
PPP1CB-202ENST00000358506 JDP2Q8WYK2 163 aa18.7■□□□□ 0.58
PPP1CB-202ENST00000358506 LZTFL1Q9NQ48 299 aa18.7■□□□□ 0.58
PPP1CB-202ENST00000358506 ATP8A2Q9NTI2 1148 aa18.7■□□□□ 0.58
PPP1CB-202ENST00000358506 NOP2P46087 812 aaKnown RBP18.7■□□□□ 0.58
PPP1CB-202ENST00000358506 PDE4DQ08499 809 aa18.7■□□□□ 0.58
PPP1CB-202ENST00000358506 GTPBP4Q9BZE4 634 aaKnown RBP18.7■□□□□ 0.58
PPP1CB-202ENST00000358506 ZSWIM5Q9P217 1185 aa18.7■□□□□ 0.58
PPP1CB-202ENST00000358506 AKR1B15C9JRZ8 316 aaPredicted RBP18.69■□□□□ 0.58
PPP1CB-202ENST00000358506 MAP9Q49MG5 647 aa18.69■□□□□ 0.58
PPP1CB-202ENST00000358506 TRMT44Q8IYL2 757 aaKnown RBP18.69■□□□□ 0.58
PPP1CB-202ENST00000358506 EHBP1Q8NDI1 1231 aa18.69■□□□□ 0.58
PPP1CB-202ENST00000358506 USP40Q9NVE5 1235 aa18.69■□□□□ 0.58
PPP1CB-202ENST00000358506 LUC7L2Q9Y383 392 aaKnown RBP18.69■□□□□ 0.58
PPP1CB-202ENST00000358506 ALDH1B1P30837 517 aa18.69■□□□□ 0.58
PPP1CB-202ENST00000358506 TRIM28Q13263 835 aaKnown RBP18.69■□□□□ 0.58
PPP1CB-202ENST00000358506 IGSF22Q8N9C0 903 aa18.69■□□□□ 0.58
PPP1CB-202ENST00000358506 STK32BQ9NY57 414 aa18.69■□□□□ 0.58
PPP1CB-202ENST00000358506 RCOR1Q9UKL0 485 aa18.69■□□□□ 0.58
PPP1CB-202ENST00000358506 SPDYE4A6NLX3 237 aa18.69■□□□□ 0.58
PPP1CB-202ENST00000358506 CYP2E1P05181 493 aaPredicted RBP18.69■□□□□ 0.58
PPP1CB-202ENST00000358506 SLC1A4P43007 532 aa18.69■□□□□ 0.58
PPP1CB-202ENST00000358506 STRBPQ96SI9 672 aaKnown RBP18.69■□□□□ 0.58
PPP1CB-202ENST00000358506 SYNRGQ9UMZ2 1314 aa18.69■□□□□ 0.58
PPP1CB-202ENST00000358506 SH2B2O14492 632 aaPredicted RBP18.69■□□□□ 0.58
PPP1CB-202ENST00000358506 RESTQ13127 1097 aa18.69■□□□□ 0.58
PPP1CB-202ENST00000358506 XPO4Q9C0E2 1151 aaKnown RBP18.69■□□□□ 0.58
PPP1CB-202ENST00000358506 ZDHHC9Q9Y397 364 aa18.69■□□□□ 0.58
PPP1CB-202ENST00000358506 A0A1W2PQ27 194 aa18.68■□□□□ 0.58
PPP1CB-202ENST00000358506 A0A1W2PQ64 194 aa18.68■□□□□ 0.58
PPP1CB-202ENST00000358506 A0A1W2PQD8 194 aa18.68■□□□□ 0.58
PPP1CB-202ENST00000358506 BTDP43251 543 aa18.68■□□□□ 0.58
PPP1CB-202ENST00000358506 SSR1P43307 286 aaKnown RBP18.68■□□□□ 0.58
PPP1CB-202ENST00000358506 PPP4R3AQ6IN85 833 aa18.68■□□□□ 0.58
PPP1CB-202ENST00000358506 TICAM2Q86XR7 235 aa18.68■□□□□ 0.58
PPP1CB-202ENST00000358506 CNGA4Q8IV77 575 aa18.68■□□□□ 0.58
PPP1CB-202ENST00000358506 CDHR2Q9BYE9 1310 aa18.68■□□□□ 0.58
PPP1CB-202ENST00000358506 LEMD3Q9Y2U8 911 aa18.68■□□□□ 0.58
PPP1CB-202ENST00000358506 MAP2P11137 1827 aaKnown RBP18.68■□□□□ 0.58
PPP1CB-202ENST00000358506 SCG2P13521 617 aa18.68■□□□□ 0.58
PPP1CB-202ENST00000358506 SLC39A14Q15043 492 aa18.68■□□□□ 0.58
PPP1CB-202ENST00000358506 CLEC4GQ6UXB4 293 aa18.68■□□□□ 0.58
PPP1CB-202ENST00000358506 XDHP47989 1333 aa18.68■□□□□ 0.58
PPP1CB-202ENST00000358506 PCP11498 1178 aaKnown RBP18.68■□□□□ 0.58
PPP1CB-202ENST00000358506 ADCY7P51828 1080 aa18.68■□□□□ 0.58
PPP1CB-202ENST00000358506 ATG9AQ7Z3C6 839 aa18.68■□□□□ 0.58
PPP1CB-202ENST00000358506 FCHSD1Q86WN1 690 aa18.68■□□□□ 0.58
PPP1CB-202ENST00000358506 MRVI1Q9Y6F6 885 aa18.68■□□□□ 0.58
PPP1CB-202ENST00000358506 BLIDQ8IZY5 108 aa18.67■□□□□ 0.58
PPP1CB-202ENST00000358506 CCDC42Q96M95 316 aa18.67■□□□□ 0.58
PPP1CB-202ENST00000358506 PRDM10Q9NQV6 1147 aa18.67■□□□□ 0.58
PPP1CB-202ENST00000358506 RNF216Q9NWF9 866 aaPredicted RBP18.67■□□□□ 0.58
PPP1CB-202ENST00000358506 TMCO5BA8MYB1 307 aa18.67■□□□□ 0.58
PPP1CB-202ENST00000358506 KIF23Q02241 960 aaPredicted RBP18.67■□□□□ 0.58
PPP1CB-202ENST00000358506 PDIA6Q15084 440 aa18.67■□□□□ 0.58
PPP1CB-202ENST00000358506 LRWD1Q9UFC0 647 aa18.67■□□□□ 0.58
PPP1CB-202ENST00000358506 TRPC5Q9UL62 973 aaPredicted RBP18.67■□□□□ 0.58
PPP1CB-202ENST00000358506 USP42Q9H9J4 1324 aaKnown RBP18.67■□□□□ 0.58
PPP1CB-202ENST00000358506 MCM3P25205 808 aa18.67■□□□□ 0.58
PPP1CB-202ENST00000358506 SETQ01105 290 aaPredicted RBP18.67■□□□□ 0.58
PPP1CB-202ENST00000358506 MSL1Q68DK7 614 aa18.67■□□□□ 0.58
PPP1CB-202ENST00000358506 REXO1Q8N1G1 1221 aaKnown RBP18.67■□□□□ 0.58
PPP1CB-202ENST00000358506 BLZF1Q9H2G9 400 aa18.67■□□□□ 0.58
PPP1CB-202ENST00000358506 SMCO2A6NFE2 343 aa18.66■□□□□ 0.58
PPP1CB-202ENST00000358506 POTEB2H3BUK9 544 aa18.66■□□□□ 0.58
PPP1CB-202ENST00000358506 DDAH1O94760 285 aa18.66■□□□□ 0.58
PPP1CB-202ENST00000358506 GOLGA8HP0CJ92 632 aa18.66■□□□□ 0.58
PPP1CB-202ENST00000358506 IMPACTQ9P2X3 320 aa18.66■□□□□ 0.58
PPP1CB-202ENST00000358506 PAK1Q13153 545 aa18.66■□□□□ 0.58
PPP1CB-202ENST00000358506 DRC1Q96MC2 740 aa18.66■□□□□ 0.58
PPP1CB-202ENST00000358506 AIFM3Q96NN9 605 aa18.66■□□□□ 0.58
PPP1CB-202ENST00000358506 NAP1L4Q99733 375 aaKnown RBP18.66■□□□□ 0.58
PPP1CB-202ENST00000358506 POLR3EQ9NVU0 708 aa18.66■□□□□ 0.58
PPP1CB-202ENST00000358506 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.66■□□□□ 0.58
PPP1CB-202ENST00000358506 KLRF2D3W0D1 207 aa18.66■□□□□ 0.58
PPP1CB-202ENST00000358506 POLR3GO15318 223 aaPredicted RBP18.66■□□□□ 0.58
PPP1CB-202ENST00000358506 POTEJP0CG39 1038 aa18.66■□□□□ 0.58
PPP1CB-202ENST00000358506 DOK7Q18PE1 504 aa18.66■□□□□ 0.58
PPP1CB-202ENST00000358506 TEKT1Q969V4 418 aa18.66■□□□□ 0.58
PPP1CB-202ENST00000358506 CYP2D7A0A087X1C5 515 aa18.66■□□□□ 0.58
PPP1CB-202ENST00000358506 PXDNLA1KZ92 1463 aa18.66■□□□□ 0.58
PPP1CB-202ENST00000358506 TBC1D8BQ0IIM8 1120 aa18.66■□□□□ 0.58
PPP1CB-202ENST00000358506 GPKOWQ92917 476 aaPredicted RBP eCLIP18.66■□□□□ 0.58
PPP1CB-202ENST00000358506 SERPINB2P05120 415 aa18.65■□□□□ 0.58
PPP1CB-202ENST00000358506 ARID5AQ03989 594 aa18.65■□□□□ 0.58
PPP1CB-202ENST00000358506 KRBA2Q6ZNG9 492 aa18.65■□□□□ 0.58
PPP1CB-202ENST00000358506 LINC00301Q8NCQ3 95 aa18.65■□□□□ 0.58
PPP1CB-202ENST00000358506 QTRT2Q9H974 415 aaKnown RBP18.65■□□□□ 0.58
PPP1CB-202ENST00000358506 BSDC1Q9NW68 430 aaPredicted RBP18.65■□□□□ 0.58
PPP1CB-202ENST00000358506 ITSN1Q15811 1721 aa18.65■□□□□ 0.58
PPP1CB-202ENST00000358506 FMNL1O95466 1100 aaPredicted RBP18.65■□□□□ 0.58
PPP1CB-202ENST00000358506 SCNN1DP51172 638 aa18.65■□□□□ 0.58
PPP1CB-202ENST00000358506 KRT83P78385 493 aa18.65■□□□□ 0.58
PPP1CB-202ENST00000358506 RNF26Q9BY78 433 aaPredicted RBP18.65■□□□□ 0.58
PPP1CB-202ENST00000358506 GUCA1BQ9UMX6 200 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms