RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 LINS1Q8NG48 757 aa12.88□□□□□ -0.35
CNOT3-202ENST00000358389 ENOX1Q8TC92 643 aaKnown RBP12.88□□□□□ -0.35
CNOT3-202ENST00000358389 EIF3HO15372 352 aaKnown RBP eCLIP12.88□□□□□ -0.35
CNOT3-202ENST00000358389 CASP1P29466 404 aa12.88□□□□□ -0.35
CNOT3-202ENST00000358389 CYP26C1Q6V0L0 522 aa12.88□□□□□ -0.35
CNOT3-202ENST00000358389 TAB2Q9NYJ8 693 aa12.88□□□□□ -0.35
CNOT3-202ENST00000358389 ARHGAP25P42331 645 aa12.87□□□□□ -0.35
CNOT3-202ENST00000358389 FXR1P51114 621 aaKnown RBP eCLIP12.87□□□□□ -0.35
CNOT3-202ENST00000358389 TIMM10P62072 90 aa12.87□□□□□ -0.35
CNOT3-202ENST00000358389 SARNPP82979 210 aaKnown RBP12.87□□□□□ -0.35
CNOT3-202ENST00000358389 SF3A3Q12874 501 aaKnown RBP eCLIP12.87□□□□□ -0.353e-6■■■■□ 25.6
CNOT3-202ENST00000358389 SH2D3CQ8N5H7 860 aa12.87□□□□□ -0.35
CNOT3-202ENST00000358389 KBTBD3Q8NAB2 608 aa12.87□□□□□ -0.35
CNOT3-202ENST00000358389 PAG1Q9NWQ8 432 aa12.87□□□□□ -0.35
CNOT3-202ENST00000358389 PPLO60437 1756 aa12.87□□□□□ -0.35
CNOT3-202ENST00000358389 BMP6P22004 513 aa12.87□□□□□ -0.35
CNOT3-202ENST00000358389 BIRC2Q13490 618 aa12.87□□□□□ -0.35
CNOT3-202ENST00000358389 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.87□□□□□ -0.35
CNOT3-202ENST00000358389 JAKMIP2Q96AA8 810 aa12.87□□□□□ -0.35
CNOT3-202ENST00000358389 SLC26A6Q9BXS9 759 aa12.87□□□□□ -0.35
CNOT3-202ENST00000358389 VIPAS39Q9H9C1 493 aa12.87□□□□□ -0.35
CNOT3-202ENST00000358389 CPS1P31327 1500 aa12.87□□□□□ -0.35
CNOT3-202ENST00000358389 IFIT1P09914 478 aaKnown RBP12.87□□□□□ -0.35
CNOT3-202ENST00000358389 IDEP14735 1019 aa12.87□□□□□ -0.35
CNOT3-202ENST00000358389 HPDP32754 393 aaPredicted RBP12.87□□□□□ -0.35
CNOT3-202ENST00000358389 IARSP41252 1262 aaKnown RBP12.87□□□□□ -0.35
CNOT3-202ENST00000358389 SLC7A5Q01650 507 aa12.87□□□□□ -0.35
CNOT3-202ENST00000358389 IQCEQ6IPM2 695 aa12.87□□□□□ -0.35
CNOT3-202ENST00000358389 CCDC121Q6ZUS5 278 aa12.87□□□□□ -0.35
CNOT3-202ENST00000358389 UBE3BQ7Z3V4 1068 aa12.87□□□□□ -0.35
CNOT3-202ENST00000358389 IQCA1Q86XH1 822 aa12.87□□□□□ -0.35
CNOT3-202ENST00000358389 GPIHBP1Q8IV16 184 aa12.87□□□□□ -0.35
CNOT3-202ENST00000358389 SYNRGQ9UMZ2 1314 aa12.87□□□□□ -0.35
CNOT3-202ENST00000358389 PEX19P40855 299 aa12.86□□□□□ -0.35
CNOT3-202ENST00000358389 EXOSC10Q01780 885 aaKnown RBP12.86□□□□□ -0.35
CNOT3-202ENST00000358389 CTAGE1Q96RT6 745 aa12.86□□□□□ -0.35
CNOT3-202ENST00000358389 MYL10Q9BUA6 226 aa12.86□□□□□ -0.35
CNOT3-202ENST00000358389 MAPK8IP1Q9UQF2 711 aa12.86□□□□□ -0.35
CNOT3-202ENST00000358389 PRAMEF22A3QJZ6 481 aa12.86□□□□□ -0.35
CNOT3-202ENST00000358389 ATP1A1P05023 1023 aaKnown RBP12.86□□□□□ -0.35
CNOT3-202ENST00000358389 PAX7P23759 505 aa12.86□□□□□ -0.35
CNOT3-202ENST00000358389 NR1I3Q14994 352 aa12.86□□□□□ -0.35
CNOT3-202ENST00000358389 RASGRP2Q7LDG7 609 aa12.86□□□□□ -0.35
CNOT3-202ENST00000358389 COL15A1P39059 1388 aa12.86□□□□□ -0.35
CNOT3-202ENST00000358389 ZNF609O15014 1411 aa12.86□□□□□ -0.35
CNOT3-202ENST00000358389 ERCC6L2Q5T890 1561 aa12.86□□□□□ -0.35
CNOT3-202ENST00000358389 A0A1B0GUA9 196 aa12.86□□□□□ -0.35
CNOT3-202ENST00000358389 PRPF6O94906 941 aaKnown RBP12.86□□□□□ -0.35
CNOT3-202ENST00000358389 SF3B2Q13435 895 aaKnown RBP12.86□□□□□ -0.35
CNOT3-202ENST00000358389 ZNF185O15231 689 aa12.86□□□□□ -0.35
CNOT3-202ENST00000358389 CDKL5O76039 1030 aa12.86□□□□□ -0.35
CNOT3-202ENST00000358389 UBXN1Q04323 297 aa12.86□□□□□ -0.35
CNOT3-202ENST00000358389 WDR93Q6P2C0 686 aa12.86□□□□□ -0.35
CNOT3-202ENST00000358389 PPANQ9NQ55 473 aaKnown RBP12.86□□□□□ -0.35
CNOT3-202ENST00000358389 CTNND2Q9UQB3 1225 aa12.86□□□□□ -0.35
CNOT3-202ENST00000358389 EPN1Q9Y6I3 576 aaPredicted RBP12.86□□□□□ -0.35
CNOT3-202ENST00000358389 A0A087WZG4 1122 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 ZNF213O14771 459 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 CCDC40Q4G0X9 1142 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 ODF2Q5BJF6 829 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 NAIF1Q69YI7 327 aaPredicted RBP12.85□□□□□ -0.35
CNOT3-202ENST00000358389 MAATS1Q7Z4T9 603 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 AMOTL1Q8IY63 956 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 NCOA7Q8NI08 942 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 IFT81Q8WYA0 676 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 KLC4Q9NSK0 619 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 BCCIPQ9P287 314 aaKnown RBP eCLIP12.85□□□□□ -0.35
CNOT3-202ENST00000358389 PHF8Q9UPP1 1060 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 PRR36Q9H6K5 1346 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 FLT4P35916 1363 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 ABCA9Q8IUA7 1624 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 MEFVO15553 781 aaPredicted RBP12.85□□□□□ -0.35
CNOT3-202ENST00000358389 MYBL2P10244 700 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 PLCD1P51178 756 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 RESP18Q5W5W9 173 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 KIF6Q6ZMV9 814 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 ABCF2Q9UG63 623 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 NEDD4P46934 1319 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 E7EVH7 732 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 ZBTB3Q9H5J0 574 aa12.85□□□□□ -0.35
CNOT3-202ENST00000358389 ZNHIT6Q9NWK9 470 aaKnown RBP12.85□□□□□ -0.35
CNOT3-202ENST00000358389 MROH1Q8NDA8 1641 aa12.84□□□□□ -0.35
CNOT3-202ENST00000358389 GOLGA8KD6RF30 607 aa12.84□□□□□ -0.35
CNOT3-202ENST00000358389 GPTP24298 496 aa12.84□□□□□ -0.35
CNOT3-202ENST00000358389 RRAGBQ5VZM2 374 aa12.84□□□□□ -0.35
CNOT3-202ENST00000358389 RRP36Q96EU6 259 aaKnown RBP12.84□□□□□ -0.35
CNOT3-202ENST00000358389 CHP1Q99653 195 aa12.84□□□□□ -0.35
CNOT3-202ENST00000358389 PPP6R2O75170 966 aa12.84□□□□□ -0.35
CNOT3-202ENST00000358389 XBP1P17861 261 aa12.84□□□□□ -0.35
CNOT3-202ENST00000358389 GCKP35557 465 aa12.84□□□□□ -0.35
CNOT3-202ENST00000358389 AARSP49588 968 aaKnown RBP eCLIP12.84□□□□□ -0.35
CNOT3-202ENST00000358389 GUCY1A3Q02108 690 aa12.84□□□□□ -0.35
CNOT3-202ENST00000358389 EPHA10Q5JZY3 1008 aa12.84□□□□□ -0.35
CNOT3-202ENST00000358389 NBPF14Q5TI25 921 aa12.84□□□□□ -0.35
CNOT3-202ENST00000358389 CCDC47Q96A33 483 aaKnown RBP12.84□□□□□ -0.35
CNOT3-202ENST00000358389 DSCC1Q9BVC3 393 aa12.84□□□□□ -0.35
CNOT3-202ENST00000358389 A0A1B0GTH6 734 aa12.84□□□□□ -0.35
CNOT3-202ENST00000358389 GOLGA8AA7E2F4 631 aa12.84□□□□□ -0.35
CNOT3-202ENST00000358389 KRT86O43790 486 aa12.84□□□□□ -0.35
CNOT3-202ENST00000358389 SKAP2O75563 359 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms