RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 COL15A1P39059 1388 aa11.3□□□□□ -0.6
RNF40-202ENST00000357890 SF3A3Q12874 501 aaKnown RBP eCLIP11.3□□□□□ -0.63e-6■■■■■ 31.7
RNF40-202ENST00000357890 BRD3Q15059 726 aa11.3□□□□□ -0.6
RNF40-202ENST00000357890 MUM1L1Q5H9M0 696 aa11.3□□□□□ -0.6
RNF40-202ENST00000357890 MCTP2Q6DN12 878 aa11.3□□□□□ -0.6
RNF40-202ENST00000357890 LMO7Q8WWI1 1683 aa11.3□□□□□ -0.6
RNF40-202ENST00000357890 SLIT3O75094 1523 aa11.3□□□□□ -0.6
RNF40-202ENST00000357890 NDUFAB1O14561 156 aa11.3□□□□□ -0.6
RNF40-202ENST00000357890 SASH3O75995 380 aa11.3□□□□□ -0.6
RNF40-202ENST00000357890 GUCY2CP25092 1073 aa11.3□□□□□ -0.6
RNF40-202ENST00000357890 MFSD6Q6ZSS7 791 aa11.3□□□□□ -0.6
RNF40-202ENST00000357890 ZBTB38Q8NAP3 1195 aaPredicted RBP11.3□□□□□ -0.6
RNF40-202ENST00000357890 BCAS4Q8TDM0 211 aa11.3□□□□□ -0.6
RNF40-202ENST00000357890 PHLPP2Q6ZVD8 1323 aa11.3□□□□□ -0.6
RNF40-202ENST00000357890 IRS4O14654 1257 aaPredicted RBP11.29□□□□□ -0.6
RNF40-202ENST00000357890 NAA25Q14CX7 972 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 ZNF827Q17R98 1081 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 CCDC181Q5TID7 509 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 LRP10Q7Z4F1 713 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 RPAINQ86UA6 219 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 PACS2Q86VP3 889 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 JADE2Q9NQC1 790 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 POLR2DO15514 142 aaKnown RBP11.29□□□□□ -0.6
RNF40-202ENST00000357890 GBP2P32456 591 aaPredicted RBP11.29□□□□□ -0.6
RNF40-202ENST00000357890 ODF2Q5BJF6 829 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 MMS22LQ6ZRQ5 1243 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 KRI1Q8N9T8 703 aaKnown RBP11.29□□□□□ -0.6
RNF40-202ENST00000357890 NFE2L3Q9Y4A8 694 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 TNS3Q68CZ2 1445 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 GOLGA6CA6NDK9 693 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 RNF40O75150 1001 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 GOLGA6DP0CG33 693 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 SLC5A1P13866 664 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 PDE6BP35913 854 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 KIF23Q02241 960 aaPredicted RBP11.29□□□□□ -0.6
RNF40-202ENST00000357890 GOLGA6AQ9NYA3 693 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 KCNJ14Q9UNX9 436 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 IQSEC3Q9UPP2 1182 aaPredicted RBP11.29□□□□□ -0.6
RNF40-202ENST00000357890 PCDHA5Q9Y5H7 936 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 JCADQ9P266 1359 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 CCDC151A5D8V7 595 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 TMEM232C9JQI7 657 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 H3BQF6 201 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 ATP8B1O43520 1251 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 SLC39A14Q15043 492 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 TADA2BQ86TJ2 420 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 CMTR1Q8N1G2 835 aaKnown RBP11.29□□□□□ -0.6
RNF40-202ENST00000357890 ENGASEQ8NFI3 743 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 CXorf56Q9H5V9 222 aa11.29□□□□□ -0.6
RNF40-202ENST00000357890 FDPSP14324 419 aaKnown RBP11.28□□□□□ -0.6
RNF40-202ENST00000357890 FBXW10Q5XX13 1052 aa11.28□□□□□ -0.6
RNF40-202ENST00000357890 SLC24A3Q9HC58 644 aa11.28□□□□□ -0.6
RNF40-202ENST00000357890 GEMIN8Q9NWZ8 242 aaKnown RBP11.28□□□□□ -0.6
RNF40-202ENST00000357890 EIF5P55010 431 aaKnown RBP11.28□□□□□ -0.6
RNF40-202ENST00000357890 DIS3L2Q8IYB7 885 aaKnown RBP11.28□□□□□ -0.6
RNF40-202ENST00000357890 ISCA1Q9BUE6 129 aa11.28□□□□□ -0.6
RNF40-202ENST00000357890 CARD10Q9BWT7 1032 aa11.28□□□□□ -0.6
RNF40-202ENST00000357890 BCCIPQ9P287 314 aaKnown RBP eCLIP11.28□□□□□ -0.6
RNF40-202ENST00000357890 CCDC196A0A1B0GTZ2 297 aa11.28□□□□□ -0.6
RNF40-202ENST00000357890 CCDC172P0C7W6 258 aa11.28□□□□□ -0.6
RNF40-202ENST00000357890 CASP8Q14790 479 aa11.28□□□□□ -0.6
RNF40-202ENST00000357890 RTN1Q16799 776 aa11.28□□□□□ -0.6
RNF40-202ENST00000357890 EFCAB13Q8IY85 973 aa11.28□□□□□ -0.6
RNF40-202ENST00000357890 TMEM87BQ96K49 555 aa11.28□□□□□ -0.6
RNF40-202ENST00000357890 GOLGA6L7A0A1B0GV03 622 aa11.27□□□□□ -0.6
RNF40-202ENST00000357890 BTBD18B2RXH4 712 aa11.27□□□□□ -0.6
RNF40-202ENST00000357890 CTDSPL2Q05D32 466 aa11.27□□□□□ -0.6
RNF40-202ENST00000357890 WTAPQ15007 396 aa11.27□□□□□ -0.6
RNF40-202ENST00000357890 MAGEB6Q8N7X4 407 aa11.27□□□□□ -0.6
RNF40-202ENST00000357890 AGXT2Q9BYV1 514 aa11.27□□□□□ -0.6
RNF40-202ENST00000357890 CEP131Q9UPN4 1083 aa11.27□□□□□ -0.6
RNF40-202ENST00000357890 STIM1Q13586 685 aa11.27□□□□□ -0.61
RNF40-202ENST00000357890 TOGARAM2Q6ZUX3 1019 aa11.27□□□□□ -0.61
RNF40-202ENST00000357890 MIGA1Q8NAN2 632 aa11.27□□□□□ -0.61
RNF40-202ENST00000357890 L2HGDHQ9H9P8 463 aa11.27□□□□□ -0.61
RNF40-202ENST00000357890 ZNF532Q9HCE3 1301 aa11.27□□□□□ -0.61
RNF40-202ENST00000357890 A0A087WUV0 522 aaPredicted RBP11.27□□□□□ -0.61
RNF40-202ENST00000357890 KIF28PB7ZC32 967 aa11.27□□□□□ -0.61
RNF40-202ENST00000357890 RANBP6O60518 1105 aaKnown RBP11.27□□□□□ -0.61
RNF40-202ENST00000357890 ATP1A2P50993 1020 aa11.27□□□□□ -0.61
RNF40-202ENST00000357890 GIGYF2Q6Y7W6 1299 aaKnown RBP11.27□□□□□ -0.61
RNF40-202ENST00000357890 SRGAP1Q7Z6B7 1085 aa11.27□□□□□ -0.61
RNF40-202ENST00000357890 GPIHBP1Q8IV16 184 aa11.27□□□□□ -0.61
RNF40-202ENST00000357890 OSBPL5Q9H0X9 879 aaPredicted RBP11.27□□□□□ -0.61
RNF40-202ENST00000357890 GREM2Q9H772 168 aa11.27□□□□□ -0.61
RNF40-202ENST00000357890 CNNM2Q9H8M5 875 aa11.27□□□□□ -0.61
RNF40-202ENST00000357890 CABP5Q9NP86 173 aa11.27□□□□□ -0.61
RNF40-202ENST00000357890 MBD4O95243 580 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 PRR29P0C7W0 189 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 CCT6AP40227 531 aaKnown RBP11.26□□□□□ -0.61
RNF40-202ENST00000357890 GNGT1P63211 74 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 SCARF1Q14162 830 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 ASAP1Q9ULH1 1129 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.26□□□□□ -0.61
RNF40-202ENST00000357890 AKR1B15C9JRZ8 316 aaPredicted RBP11.26□□□□□ -0.61
RNF40-202ENST00000357890 N4BP3O15049 544 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 IGHMBP2P38935 993 aaKnown RBP11.26□□□□□ -0.61
RNF40-202ENST00000357890 CLNS1AP54105 237 aaKnown RBP11.26□□□□□ -0.61
RNF40-202ENST00000357890 CTSWP56202 376 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 LRCH2Q5VUJ6 765 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms