RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 TBC1D9Q6ZT07 1266 aa10.59□□□□□ -0.71
COL4A3BP-202ENST00000357457 DIS3LQ8TF46 1054 aaKnown RBP10.59□□□□□ -0.71
COL4A3BP-202ENST00000357457 NEUROD6Q96NK8 337 aa10.59□□□□□ -0.71
COL4A3BP-202ENST00000357457 HMX1Q9NP08 348 aaPredicted RBP10.59□□□□□ -0.71
COL4A3BP-202ENST00000357457 PI4KBQ9UBF8 816 aa10.59□□□□□ -0.71
COL4A3BP-202ENST00000357457 HERC5Q9UII4 1024 aaKnown RBP10.59□□□□□ -0.71
COL4A3BP-202ENST00000357457 OGDHLQ9ULD0 1010 aa10.59□□□□□ -0.71
COL4A3BP-202ENST00000357457 XRCC5P13010 732 aaKnown RBP10.58□□□□□ -0.72
COL4A3BP-202ENST00000357457 RARSP54136 660 aaKnown RBP10.58□□□□□ -0.72
COL4A3BP-202ENST00000357457 BACE1P56817 501 aa10.58□□□□□ -0.72
COL4A3BP-202ENST00000357457 PPP4CP60510 307 aa10.58□□□□□ -0.72
COL4A3BP-202ENST00000357457 TRIM32Q13049 653 aa10.58□□□□□ -0.72
COL4A3BP-202ENST00000357457 MAP3K21Q5TCX8 1036 aa10.58□□□□□ -0.72
COL4A3BP-202ENST00000357457 PI16Q6UXB8 463 aa10.58□□□□□ -0.72
COL4A3BP-202ENST00000357457 SLC17A8Q8NDX2 589 aa10.58□□□□□ -0.72
COL4A3BP-202ENST00000357457 LRCH3Q96II8 777 aa10.58□□□□□ -0.72
COL4A3BP-202ENST00000357457 P2RX7Q99572 595 aaKnown RBP10.58□□□□□ -0.72
COL4A3BP-202ENST00000357457 NBPF3Q9H094 633 aa10.58□□□□□ -0.72
COL4A3BP-202ENST00000357457 DHX36Q9H2U1 1008 aaKnown RBP10.58□□□□□ -0.72
COL4A3BP-202ENST00000357457 AS3MTQ9HBK9 375 aa10.58□□□□□ -0.72
COL4A3BP-202ENST00000357457 GINM1Q9NU53 330 aa10.58□□□□□ -0.72
COL4A3BP-202ENST00000357457 SIPA1L1O43166 1804 aa10.58□□□□□ -0.72
COL4A3BP-202ENST00000357457 CDK5RAP2Q96SN8 1893 aa10.57□□□□□ -0.72
COL4A3BP-202ENST00000357457 C19orf81C9J6K1 198 aa10.57□□□□□ -0.72
COL4A3BP-202ENST00000357457 MCAMP43121 646 aa10.57□□□□□ -0.72
COL4A3BP-202ENST00000357457 FOXP4Q8IVH2 680 aaPredicted RBP10.57□□□□□ -0.72
COL4A3BP-202ENST00000357457 TEX11Q8IYF3 940 aa10.57□□□□□ -0.72
COL4A3BP-202ENST00000357457 USP6NLQ92738 828 aa10.57□□□□□ -0.72
COL4A3BP-202ENST00000357457 RAI14Q9P0K7 980 aa10.57□□□□□ -0.72
COL4A3BP-202ENST00000357457 MYO5AQ9Y4I1 1855 aaKnown RBP10.56□□□□□ -0.72
COL4A3BP-202ENST00000357457 DLL1O00548 723 aa10.56□□□□□ -0.72
COL4A3BP-202ENST00000357457 IGSF3O75054 1194 aa10.56□□□□□ -0.72
COL4A3BP-202ENST00000357457 ASNSP08243 561 aa10.56□□□□□ -0.72
COL4A3BP-202ENST00000357457 UQCRFS1P1P0C7P4 283 aa10.56□□□□□ -0.72
COL4A3BP-202ENST00000357457 PLCG2P16885 1265 aa10.56□□□□□ -0.72
COL4A3BP-202ENST00000357457 JAG1P78504 1218 aa10.56□□□□□ -0.72
COL4A3BP-202ENST00000357457 LRIT3Q3SXY7 679 aa10.56□□□□□ -0.72
COL4A3BP-202ENST00000357457 GORABQ5T7V8 394 aa10.56□□□□□ -0.72
COL4A3BP-202ENST00000357457 GPRC5AQ8NFJ5 357 aa10.56□□□□□ -0.72
COL4A3BP-202ENST00000357457 SH3RF3Q8TEJ3 882 aaPredicted RBP10.56□□□□□ -0.72
COL4A3BP-202ENST00000357457 TRIB2Q92519 343 aa10.56□□□□□ -0.72
COL4A3BP-202ENST00000357457 C11orf49Q9H6J7 331 aa10.56□□□□□ -0.72
COL4A3BP-202ENST00000357457 TXNRD2Q9NNW7 524 aa10.56□□□□□ -0.72
COL4A3BP-202ENST00000357457 GPR108Q9NPR9 543 aa10.56□□□□□ -0.72
COL4A3BP-202ENST00000357457 RBPJLQ9UBG7 517 aa10.56□□□□□ -0.72
COL4A3BP-202ENST00000357457 DAXXQ9UER7 740 aaPredicted RBP10.56□□□□□ -0.72
COL4A3BP-202ENST00000357457 VCANP13611 3396 aa10.56□□□□□ -0.72
COL4A3BP-202ENST00000357457 FOCADQ5VW36 1801 aa10.56□□□□□ -0.72
COL4A3BP-202ENST00000357457 DDX60LQ5H9U9 1706 aaKnown RBP10.55□□□□□ -0.72
COL4A3BP-202ENST00000357457 PNMA6EA0A0J9YXQ4 647 aa10.55□□□□□ -0.72
COL4A3BP-202ENST00000357457 USP17L10C9JJH3 530 aa10.55□□□□□ -0.72
COL4A3BP-202ENST00000357457 BAG3O95817 575 aa10.55□□□□□ -0.72
COL4A3BP-202ENST00000357457 GNAI2P04899 355 aa10.55□□□□□ -0.72
COL4A3BP-202ENST00000357457 COL6A1P12109 1028 aa10.55□□□□□ -0.72
COL4A3BP-202ENST00000357457 CYP2B6P20813 491 aa10.55□□□□□ -0.72
COL4A3BP-202ENST00000357457 HERVK_113P62684 666 aa10.55□□□□□ -0.72
COL4A3BP-202ENST00000357457 G3BP1Q13283 466 aaKnown RBP eCLIP10.55□□□□□ -0.72
COL4A3BP-202ENST00000357457 MTMR2Q13614 643 aa10.55□□□□□ -0.72
COL4A3BP-202ENST00000357457 Q3C1V9 767 aa10.55□□□□□ -0.72
COL4A3BP-202ENST00000357457 POTEEQ6S8J3 1075 aa10.55□□□□□ -0.72
COL4A3BP-202ENST00000357457 TRMT44Q8IYL2 757 aaKnown RBP10.55□□□□□ -0.72
COL4A3BP-202ENST00000357457 C7orf61Q8IZ16 206 aa10.55□□□□□ -0.72
COL4A3BP-202ENST00000357457 NUDT12Q9BQG2 462 aa10.55□□□□□ -0.72
COL4A3BP-202ENST00000357457 DNAJC18Q9H819 358 aa10.55□□□□□ -0.72
COL4A3BP-202ENST00000357457 LRP2BPQ9P2M1 347 aa10.55□□□□□ -0.72
COL4A3BP-202ENST00000357457 ZMYND8Q9ULU4 1186 aaPredicted RBP10.55□□□□□ -0.72
COL4A3BP-202ENST00000357457 PEX10O60683 326 aa10.54□□□□□ -0.72
COL4A3BP-202ENST00000357457 MAPK4P31152 587 aa10.54□□□□□ -0.72
COL4A3BP-202ENST00000357457 MAGEA10P43363 369 aaPredicted RBP10.54□□□□□ -0.72
COL4A3BP-202ENST00000357457 ERVK-9P63128 1117 aa10.54□□□□□ -0.72
COL4A3BP-202ENST00000357457 ERVK-24P63145 666 aa10.54□□□□□ -0.72
COL4A3BP-202ENST00000357457 IRX3P78415 501 aaPredicted RBP10.54□□□□□ -0.72
COL4A3BP-202ENST00000357457 MORN1Q5T089 497 aa10.54□□□□□ -0.72
COL4A3BP-202ENST00000357457 LHX8Q68G74 356 aa10.54□□□□□ -0.72
COL4A3BP-202ENST00000357457 NAA16Q6N069 864 aaPredicted RBP10.54□□□□□ -0.72
COL4A3BP-202ENST00000357457 GTF3C2Q8WUA4 911 aaPredicted RBP10.54□□□□□ -0.72
COL4A3BP-202ENST00000357457 TGFBRAP1Q8WUH2 860 aa10.54□□□□□ -0.72
COL4A3BP-202ENST00000357457 SOCS4Q8WXH5 440 aa10.54□□□□□ -0.72
COL4A3BP-202ENST00000357457 ZNF512BQ96KM6 892 aaPredicted RBP10.54□□□□□ -0.72
COL4A3BP-202ENST00000357457 EMILIN3Q9NT22 766 aa10.54□□□□□ -0.72
COL4A3BP-202ENST00000357457 AATFQ9NY61 560 aaKnown RBP eCLIP10.54□□□□□ -0.72
COL4A3BP-202ENST00000357457 TMOD4Q9NZQ9 345 aa10.54□□□□□ -0.72
COL4A3BP-202ENST00000357457 PFASO15067 1338 aa10.54□□□□□ -0.72
COL4A3BP-202ENST00000357457 IPO8O15397 1037 aaKnown RBP10.53□□□□□ -0.72
COL4A3BP-202ENST00000357457 CYP2E1P05181 493 aaPredicted RBP10.53□□□□□ -0.72
COL4A3BP-202ENST00000357457 TRIM27P14373 513 aa10.53□□□□□ -0.72
COL4A3BP-202ENST00000357457 CACNB2Q08289 660 aaPredicted RBP10.53□□□□□ -0.72
COL4A3BP-202ENST00000357457 ADGRA1Q86SQ6 560 aa10.53□□□□□ -0.72
COL4A3BP-202ENST00000357457 RASEFQ8IZ41 740 aa10.53□□□□□ -0.72
COL4A3BP-202ENST00000357457 TDHQ8IZJ6 230 aa10.53□□□□□ -0.72
COL4A3BP-202ENST00000357457 NOL10Q9BSC4 688 aaKnown RBP10.53□□□□□ -0.72
COL4A3BP-202ENST00000357457 PORCNQ9H237 461 aa10.53□□□□□ -0.72
COL4A3BP-202ENST00000357457 PALD1Q9ULE6 856 aa10.53□□□□□ -0.72
COL4A3BP-202ENST00000357457 FLT1P17948 1338 aa10.53□□□□□ -0.72
COL4A3BP-202ENST00000357457 EYSQ5T1H1 3165 aa10.53□□□□□ -0.72
COL4A3BP-202ENST00000357457 MYH1P12882 1939 aa10.52□□□□□ -0.72
COL4A3BP-202ENST00000357457 GABBR2O75899 941 aa10.52□□□□□ -0.73
COL4A3BP-202ENST00000357457 SYN1P17600 705 aa10.52□□□□□ -0.73
COL4A3BP-202ENST00000357457 RGS2P41220 211 aa10.52□□□□□ -0.73
COL4A3BP-202ENST00000357457 SHROOM1Q2M3G4 852 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms