RNA–Protein interactions for RNA: ENST00000356924.8

ABCD4-201, Transcript of ATP binding cassette subfamily D member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD4, Length 3,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-201ENST00000356924 FAM47AQ5JRC9 791 aa12.94□□□□□ -0.34
ABCD4-201ENST00000356924 USP17L1Q7RTZ2 530 aa12.94□□□□□ -0.34
ABCD4-201ENST00000356924 FERMT3Q86UX7 667 aa12.94□□□□□ -0.34
ABCD4-201ENST00000356924 RTKN2Q8IZC4 609 aa12.94□□□□□ -0.34
ABCD4-201ENST00000356924 TMTC2Q8N394 836 aa12.94□□□□□ -0.34
ABCD4-201ENST00000356924 TMEM87AQ8NBN3 555 aa12.94□□□□□ -0.34
ABCD4-201ENST00000356924 PPIP5K2O43314 1243 aa12.94□□□□□ -0.34
ABCD4-201ENST00000356924 FOSBP53539 338 aa12.94□□□□□ -0.34
ABCD4-201ENST00000356924 SGIP1Q9BQI5 828 aa12.94□□□□□ -0.34
ABCD4-201ENST00000356924 GDPD2Q9HCC8 539 aa12.94□□□□□ -0.34
ABCD4-201ENST00000356924 ATP6V1DQ9Y5K8 247 aa12.94□□□□□ -0.34
ABCD4-201ENST00000356924 POLR3DP05423 398 aaPredicted RBP12.93□□□□□ -0.34
ABCD4-201ENST00000356924 POLD1P28340 1107 aa12.93□□□□□ -0.34
ABCD4-201ENST00000356924 CRKP46108 304 aa12.93□□□□□ -0.34
ABCD4-201ENST00000356924 DNM1Q05193 864 aaKnown RBP12.93□□□□□ -0.34
ABCD4-201ENST00000356924 APOBEC3HQ6NTF7 200 aaKnown RBP12.93□□□□□ -0.34
ABCD4-201ENST00000356924 ZNF654Q8IZM8 581 aa12.93□□□□□ -0.34
ABCD4-201ENST00000356924 CCDC94Q9BW85 323 aaPredicted RBP12.93□□□□□ -0.34
ABCD4-201ENST00000356924 MRIQ9BWK5 157 aa12.93□□□□□ -0.34
ABCD4-201ENST00000356924 ORC3Q9UBD5 711 aaPredicted RBP12.93□□□□□ -0.34
ABCD4-201ENST00000356924 CPLX1O14810 134 aa12.93□□□□□ -0.34
ABCD4-201ENST00000356924 RCAN1P53805 252 aa12.93□□□□□ -0.34
ABCD4-201ENST00000356924 SASS6Q6UVJ0 657 aa12.93□□□□□ -0.34
ABCD4-201ENST00000356924 USP48Q86UV5 1035 aa12.93□□□□□ -0.34
ABCD4-201ENST00000356924 GPT2Q8TD30 523 aa12.93□□□□□ -0.34
ABCD4-201ENST00000356924 TEKT1Q969V4 418 aa12.93□□□□□ -0.34
ABCD4-201ENST00000356924 DDX4Q9NQI0 724 aaKnown RBP12.93□□□□□ -0.34
ABCD4-201ENST00000356924 NMT2O60551 498 aa12.92□□□□□ -0.34
ABCD4-201ENST00000356924 WDHD1O75717 1129 aaPredicted RBP12.92□□□□□ -0.34
ABCD4-201ENST00000356924 CDC42EP5Q6NZY7 148 aa12.92□□□□□ -0.34
ABCD4-201ENST00000356924 SLC44A5Q8NCS7 719 aa12.92□□□□□ -0.34
ABCD4-201ENST00000356924 USP40Q9NVE5 1235 aa12.92□□□□□ -0.34
ABCD4-201ENST00000356924 ZKSCAN5Q9Y2L8 839 aa12.92□□□□□ -0.34
ABCD4-201ENST00000356924 KIF3AQ9Y496 699 aa12.92□□□□□ -0.34
ABCD4-201ENST00000356924 PCDHAC2Q9Y5I4 1007 aa12.92□□□□□ -0.34
ABCD4-201ENST00000356924 FER1L6Q2WGJ9 1857 aa12.92□□□□□ -0.34
ABCD4-201ENST00000356924 H3BQV1 296 aa12.92□□□□□ -0.34
ABCD4-201ENST00000356924 IFFO2Q5TF58 517 aa12.92□□□□□ -0.34
ABCD4-201ENST00000356924 FAM173BQ6P4H8 233 aa12.92□□□□□ -0.34
ABCD4-201ENST00000356924 SYNE3Q6ZMZ3 975 aa12.92□□□□□ -0.34
ABCD4-201ENST00000356924 IQCA1Q86XH1 822 aa12.92□□□□□ -0.34
ABCD4-201ENST00000356924 KIAA0825Q8IV33 1275 aa12.92□□□□□ -0.34
ABCD4-201ENST00000356924 AMOTL1Q8IY63 956 aa12.92□□□□□ -0.34
ABCD4-201ENST00000356924 ZDHHC15Q96MV8 337 aa12.92□□□□□ -0.34
ABCD4-201ENST00000356924 PIM2Q9P1W9 311 aa12.92□□□□□ -0.34
ABCD4-201ENST00000356924 ZNF445P59923 1031 aa12.91□□□□□ -0.34
ABCD4-201ENST00000356924 C16orf86Q6ZW13 317 aa12.91□□□□□ -0.34
ABCD4-201ENST00000356924 GADD45BO75293 160 aaPredicted RBP12.91□□□□□ -0.34
ABCD4-201ENST00000356924 RASA1P20936 1047 aa12.91□□□□□ -0.34
ABCD4-201ENST00000356924 NT5C2P49902 561 aa12.91□□□□□ -0.34
ABCD4-201ENST00000356924 HDLBPQ00341 1268 aaKnown RBP12.91□□□□□ -0.34
ABCD4-201ENST00000356924 RTN1Q16799 776 aa12.91□□□□□ -0.34
ABCD4-201ENST00000356924 IFIT1BQ5T764 474 aaKnown RBP12.91□□□□□ -0.34
ABCD4-201ENST00000356924 PHKBQ93100 1093 aa12.91□□□□□ -0.34
ABCD4-201ENST00000356924 ZNF277Q9NRM2 450 aaPredicted RBP12.91□□□□□ -0.34
ABCD4-201ENST00000356924 IL17RBQ9NRM6 502 aa12.91□□□□□ -0.34
ABCD4-201ENST00000356924 TSPY2A6NKD2 308 aa12.91□□□□□ -0.34
ABCD4-201ENST00000356924 CDKL5O76039 1030 aa12.91□□□□□ -0.34
ABCD4-201ENST00000356924 TFAP4Q01664 338 aa12.91□□□□□ -0.34
ABCD4-201ENST00000356924 PDE4CQ08493 712 aa12.91□□□□□ -0.34
ABCD4-201ENST00000356924 RCSD1Q6JBY9 416 aa12.91□□□□□ -0.34
ABCD4-201ENST00000356924 FANCBQ8NB91 859 aa12.91□□□□□ -0.34
ABCD4-201ENST00000356924 PDLIM2Q96JY6 352 aa12.91□□□□□ -0.34
ABCD4-201ENST00000356924 IFNAR1P17181 557 aa12.9□□□□□ -0.34
ABCD4-201ENST00000356924 CDK8P49336 464 aa12.9□□□□□ -0.34
ABCD4-201ENST00000356924 GUCY1B3Q02153 619 aa12.9□□□□□ -0.34
ABCD4-201ENST00000356924 PICALMQ13492 652 aa12.9□□□□□ -0.34
ABCD4-201ENST00000356924 OTUD7BQ6GQQ9 843 aa12.9□□□□□ -0.34
ABCD4-201ENST00000356924 NBPF11Q86T75 865 aa12.9□□□□□ -0.34
ABCD4-201ENST00000356924 TSC1Q92574 1164 aa12.9□□□□□ -0.34
ABCD4-201ENST00000356924 AIFM3Q96NN9 605 aa12.9□□□□□ -0.34
ABCD4-201ENST00000356924 ZSCAN16Q9H4T2 348 aaPredicted RBP12.9□□□□□ -0.34
ABCD4-201ENST00000356924 STK36Q9NRP7 1315 aa12.9□□□□□ -0.34
ABCD4-201ENST00000356924 SIPA1L1O43166 1804 aa12.9□□□□□ -0.34
ABCD4-201ENST00000356924 FMNL1O95466 1100 aaPredicted RBP12.9□□□□□ -0.34
ABCD4-201ENST00000356924 CPLX2Q6PUV4 134 aaKnown RBP12.9□□□□□ -0.34
ABCD4-201ENST00000356924 NUP133Q8WUM0 1156 aa12.9□□□□□ -0.34
ABCD4-201ENST00000356924 ANKS1AQ92625 1134 aa12.9□□□□□ -0.34
ABCD4-201ENST00000356924 VPS33BQ9H267 617 aa12.9□□□□□ -0.34
ABCD4-201ENST00000356924 GJB4Q9NTQ9 266 aa12.9□□□□□ -0.34
ABCD4-201ENST00000356924 TCP11L1Q9NUJ3 509 aa12.9□□□□□ -0.34
ABCD4-201ENST00000356924 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.9□□□□□ -0.34
ABCD4-201ENST00000356924 ZSCAN20P17040 1043 aaPredicted RBP12.89□□□□□ -0.35
ABCD4-201ENST00000356924 PTGER2P43116 358 aa12.89□□□□□ -0.35
ABCD4-201ENST00000356924 TROAPQ12815 778 aa12.89□□□□□ -0.35
ABCD4-201ENST00000356924 SOGA3Q5TF21 947 aa12.89□□□□□ -0.35
ABCD4-201ENST00000356924 RGS22Q8NE09 1264 aa12.89□□□□□ -0.35
ABCD4-201ENST00000356924 C8orf76Q96K31 380 aa12.89□□□□□ -0.35
ABCD4-201ENST00000356924 MKNK2Q9HBH9 465 aa12.89□□□□□ -0.35
ABCD4-201ENST00000356924 UBE2Q2LH0YL09 131 aa12.89□□□□□ -0.35
ABCD4-201ENST00000356924 FIBPO43427 364 aa12.89□□□□□ -0.35
ABCD4-201ENST00000356924 IARSP41252 1262 aaKnown RBP12.89□□□□□ -0.35
ABCD4-201ENST00000356924 FBXO18Q8NFZ0 1043 aa12.89□□□□□ -0.35
ABCD4-201ENST00000356924 SERPINA10Q9UK55 444 aa12.89□□□□□ -0.35
ABCD4-201ENST00000356924 PSDA5PKW4 1024 aaPredicted RBP12.88□□□□□ -0.35
ABCD4-201ENST00000356924 DDAH1O94760 285 aa12.88□□□□□ -0.35
ABCD4-201ENST00000356924 GABPAQ06546 454 aa12.88□□□□□ -0.35
ABCD4-201ENST00000356924 DALRD3Q5D0E6 543 aaKnown RBP12.88□□□□□ -0.35
ABCD4-201ENST00000356924 CATIPQ7Z7H3 387 aa12.88□□□□□ -0.35
ABCD4-201ENST00000356924 LARGE2Q8N3Y3 721 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms