RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 CCDC105Q8IYK2 499 aa17.85■□□□□ 0.45
RXRA-201ENST00000356384 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.85■□□□□ 0.452e-7■■■□□ 15.5
RXRA-201ENST00000356384 UIMC1Q96RL1 719 aa17.85■□□□□ 0.45
RXRA-201ENST00000356384 SOS1Q07889 1333 aaPredicted RBP17.84■□□□□ 0.45
RXRA-201ENST00000356384 KRT24Q2M2I5 525 aa17.84■□□□□ 0.45
RXRA-201ENST00000356384 TSPYL6Q8N831 410 aa17.84■□□□□ 0.45
RXRA-201ENST00000356384 ZNF408Q9H9D4 720 aa17.84■□□□□ 0.45
RXRA-201ENST00000356384 ZNF853P0CG23 659 aa17.84■□□□□ 0.45
RXRA-201ENST00000356384 NUP58Q9BVL2 599 aa17.84■□□□□ 0.45
RXRA-201ENST00000356384 NCOA5Q9HCD5 579 aaKnown RBP17.84■□□□□ 0.45
RXRA-201ENST00000356384 MAGEA1P43355 309 aa17.84■□□□□ 0.45
RXRA-201ENST00000356384 ZYXQ15942 572 aaKnown RBP17.84■□□□□ 0.45
RXRA-201ENST00000356384 DYMQ7RTS9 669 aa17.84■□□□□ 0.45
RXRA-201ENST00000356384 NACA2Q9H009 215 aa17.84■□□□□ 0.45
RXRA-201ENST00000356384 DDX21Q9NR30 783 aaKnown RBP eCLIP17.84■□□□□ 0.45
RXRA-201ENST00000356384 FAM170AA1A519 330 aa17.84■□□□□ 0.45
RXRA-201ENST00000356384 CCDC125Q86Z20 511 aa17.84■□□□□ 0.45
RXRA-201ENST00000356384 PDE1CQ14123 709 aaPredicted RBP17.83■□□□□ 0.45
RXRA-201ENST00000356384 LGSNQ5TDP6 509 aa17.83■□□□□ 0.45
RXRA-201ENST00000356384 NOP56O00567 594 aaKnown RBP17.83■□□□□ 0.44
RXRA-201ENST00000356384 CD19P15391 556 aa17.83■□□□□ 0.44
RXRA-201ENST00000356384 TTC38Q5R3I4 469 aa17.83■□□□□ 0.44
RXRA-201ENST00000356384 HERC4Q5GLZ8 1057 aaPredicted RBP17.83■□□□□ 0.44
RXRA-201ENST00000356384 MYO1AQ9UBC5 1043 aa17.83■□□□□ 0.44
RXRA-201ENST00000356384 PAK2Q13177 524 aa17.83■□□□□ 0.44
RXRA-201ENST00000356384 MAP7Q14244 749 aa17.83■□□□□ 0.44
RXRA-201ENST00000356384 OTUD7BQ6GQQ9 843 aa17.83■□□□□ 0.44
RXRA-201ENST00000356384 SNX29Q8TEQ0 813 aa17.83■□□□□ 0.44
RXRA-201ENST00000356384 TMEM87BQ96K49 555 aa17.83■□□□□ 0.44
RXRA-201ENST00000356384 PLEKHA4Q9H4M7 779 aa17.83■□□□□ 0.44
RXRA-201ENST00000356384 KRT19P08727 400 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 RAD51AP2Q09MP3 1159 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 C17orf53Q8N3J3 647 aaPredicted RBP17.82■□□□□ 0.44
RXRA-201ENST00000356384 MGARPQ8TDB4 240 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 VPS37BQ9H9H4 285 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 SRGAP1Q7Z6B7 1085 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 NELFCDQ8IXH7 590 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 RILPQ96NA2 401 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 PICK1Q9NRD5 415 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 TMOD4Q9NZQ9 345 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 TBC1D8O95759 1140 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 IL2RBP14784 551 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 CROCCP2Q86T23 111 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 DIS3L2Q8IYB7 885 aaKnown RBP17.82■□□□□ 0.44
RXRA-201ENST00000356384 SLC27A2O14975 620 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 PRDM1O75626 825 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 KLHL30Q0D2K2 578 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 CCDC38Q502W7 563 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 FAM173BQ6P4H8 233 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 SND1Q7KZF4 910 aaKnown RBP eCLIP17.82■□□□□ 0.44
RXRA-201ENST00000356384 MYCT1Q8N699 235 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 GSDMBQ8TAX9 411 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 NSMCE1Q8WV22 266 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 GPHNQ9NQX3 736 aaPredicted RBP17.82■□□□□ 0.44
RXRA-201ENST00000356384 TNRQ92752 1358 aa17.82■□□□□ 0.44
RXRA-201ENST00000356384 EXOC3O60645 756 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 ZNF75DP51815 510 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 BSPRYQ5W0U4 402 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 PHLDB2Q86SQ0 1253 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 ARHGEF10LQ9HCE6 1279 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 TIMM10P62072 90 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 ANKRD20A3Q5VUR7 823 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 TMTC1Q8IUR5 882 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 RBM17Q96I25 401 aaKnown RBP17.81■□□□□ 0.44
RXRA-201ENST00000356384 CBX8Q9HC52 389 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 LRWD1Q9UFC0 647 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 A6NNZ2 444 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 CUTAO60888 179 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 BIRC2Q13490 618 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 RPS6KA1Q15418 735 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 TUBB8Q3ZCM7 444 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 RAB3IPQ96QF0 476 aaPredicted RBP17.81■□□□□ 0.44
RXRA-201ENST00000356384 SLF1Q9BQI6 1058 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 RLBP1P12271 317 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 ARHGAP25P42331 645 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 SH2D4BQ5SQS7 431 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 FNBP4Q8N3X1 1017 aaPredicted RBP17.81■□□□□ 0.44
RXRA-201ENST00000356384 CCDC89Q8N998 374 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 MLKLQ8NB16 471 aa17.81■□□□□ 0.44
RXRA-201ENST00000356384 UFL1O94874 794 aa17.8■□□□□ 0.44
RXRA-201ENST00000356384 PEX26Q7Z412 305 aa17.8■□□□□ 0.44
RXRA-201ENST00000356384 ANKRD42Q8N9B4 389 aa17.8■□□□□ 0.44
RXRA-201ENST00000356384 VAMP4O75379 141 aa17.8■□□□□ 0.44
RXRA-201ENST00000356384 GCNT3O95395 438 aa17.8■□□□□ 0.44
RXRA-201ENST00000356384 SLC12A2P55011 1212 aa17.8■□□□□ 0.44
RXRA-201ENST00000356384 CFAP221Q4G0U5 840 aa17.8■□□□□ 0.44
RXRA-201ENST00000356384 RABGAP1Q9Y3P9 1069 aa17.8■□□□□ 0.44
RXRA-201ENST00000356384 ZNF518AQ6AHZ1 1483 aa17.8■□□□□ 0.44
RXRA-201ENST00000356384 BRDTQ58F21 947 aaPredicted RBP17.8■□□□□ 0.44
RXRA-201ENST00000356384 SYCE1Q8N0S2 351 aa17.8■□□□□ 0.44
RXRA-201ENST00000356384 POLKQ9UBT6 870 aa17.8■□□□□ 0.44
RXRA-201ENST00000356384 GNPATO15228 680 aa17.79■□□□□ 0.44
RXRA-201ENST00000356384 NLRP12P59046 1061 aa17.79■□□□□ 0.44
RXRA-201ENST00000356384 NBPF14Q5TI25 921 aa17.79■□□□□ 0.44
RXRA-201ENST00000356384 A2MP01023 1474 aa17.79■□□□□ 0.44
RXRA-201ENST00000356384 FLOT1O75955 427 aa17.79■□□□□ 0.44
RXRA-201ENST00000356384 MTX1Q13505 466 aa17.79■□□□□ 0.44
RXRA-201ENST00000356384 DIXDC1Q155Q3 683 aa17.79■□□□□ 0.44
RXRA-201ENST00000356384 KRT71Q3SY84 523 aa17.79■□□□□ 0.44
RXRA-201ENST00000356384 CDAN1Q8IWY9 1227 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms