RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 BSPRYQ5W0U4 402 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 KLHL14Q9P2G3 628 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 DDX41Q9UJV9 622 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 ADKP55263 362 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 RPS6KA2Q15349 733 aa12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 NBPF6Q5VWK0 638 aa12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 NBPF4Q96M43 638 aa12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 KRT12Q99456 494 aa12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 SPATS2LQ9NUQ6 558 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 TRIM35Q9UPQ4 493 aa12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 BCAP29Q9UHQ4 241 aa12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 ZMYM3Q14202 1370 aa12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 UNC13AQ9UPW8 1703 aa12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 PALM2Q8IXS6 379 aa12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 PPFIA4O75335 1185 aa12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 KRT3P12035 628 aa12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 PHEXP78562 749 aa12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 RPS6KA1Q15418 735 aa12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 LGSNQ5TDP6 509 aa12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 CFAP61Q8NHU2 1237 aa12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 LAMC3Q9Y6N6 1575 aa12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 E2F5Q15329 346 aa12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 SEPT8Q92599 483 aa12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 NUP58Q9BVL2 599 aa12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 FAM135AQ9P2D6 1515 aa12.22□□□□□ -0.45
GTF3C1-201ENST00000356183 PIK3AP1Q6ZUJ8 805 aa12.21□□□□□ -0.45
GTF3C1-201ENST00000356183 PEX26Q7Z412 305 aa12.21□□□□□ -0.45
GTF3C1-201ENST00000356183 RNF113AO15541 343 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-201ENST00000356183 SLC9C1Q4G0N8 1177 aa12.21□□□□□ -0.45
GTF3C1-201ENST00000356183 CCDC117Q8IWD4 279 aaPredicted RBP12.21□□□□□ -0.45
GTF3C1-201ENST00000356183 NELFBQ8WX92 580 aa12.21□□□□□ -0.45
GTF3C1-201ENST00000356183 NUCKS1Q9H1E3 243 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-201ENST00000356183 POLKQ9UBT6 870 aa12.21□□□□□ -0.45
GTF3C1-201ENST00000356183 MAP3K21Q5TCX8 1036 aa12.21□□□□□ -0.45
GTF3C1-201ENST00000356183 CROCCP2Q86T23 111 aa12.21□□□□□ -0.45
GTF3C1-201ENST00000356183 SCYL1Q96KG9 808 aa12.21□□□□□ -0.45
GTF3C1-201ENST00000356183 KIF14Q15058 1648 aa12.21□□□□□ -0.45
GTF3C1-201ENST00000356183 RBBP5Q15291 538 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-201ENST00000356183 CCDC93Q567U6 631 aa12.21□□□□□ -0.45
GTF3C1-201ENST00000356183 SAP30BPQ9UHR5 308 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-201ENST00000356183 POLR3AO14802 1390 aaPredicted RBP12.21□□□□□ -0.46
GTF3C1-201ENST00000356183 CCT5P48643 541 aa12.21□□□□□ -0.46
GTF3C1-201ENST00000356183 SYCE1Q8N0S2 351 aa12.21□□□□□ -0.46
GTF3C1-201ENST00000356183 KCNH3Q9ULD8 1083 aa12.21□□□□□ -0.46
GTF3C1-201ENST00000356183 TCOF1Q13428 1488 aaKnown RBP12.21□□□□□ -0.46
GTF3C1-201ENST00000356183 PIK3C2GO75747 1445 aa12.21□□□□□ -0.46
GTF3C1-201ENST00000356183 UHMK1Q8TAS1 419 aaKnown RBP12.21□□□□□ -0.46
GTF3C1-201ENST00000356183 SEPT10Q9P0V9 454 aa12.21□□□□□ -0.46
GTF3C1-201ENST00000356183 DTNBO60941 627 aa12.2□□□□□ -0.46
GTF3C1-201ENST00000356183 CASP2P42575 452 aa12.2□□□□□ -0.46
GTF3C1-201ENST00000356183 ST5P78524 1137 aa12.2□□□□□ -0.46
GTF3C1-201ENST00000356183 BACH1O14867 736 aa12.2□□□□□ -0.46
GTF3C1-201ENST00000356183 DNAJC5BQ9UF47 199 aa12.2□□□□□ -0.46
GTF3C1-201ENST00000356183 GOLGA5Q8TBA6 731 aa12.2□□□□□ -0.46
GTF3C1-201ENST00000356183 RAB17Q9H0T7 212 aa12.2□□□□□ -0.46
GTF3C1-201ENST00000356183 RAD50Q92878 1312 aa12.2□□□□□ -0.46
GTF3C1-201ENST00000356183 NUP160Q12769 1436 aa12.2□□□□□ -0.46
GTF3C1-201ENST00000356183 ANKRD36BQ8N2N9 1353 aa12.2□□□□□ -0.46
GTF3C1-201ENST00000356183 SFMBT2Q5VUG0 894 aa12.2□□□□□ -0.46
GTF3C1-201ENST00000356183 DHX32Q7L7V1 743 aaKnown RBP12.2□□□□□ -0.46
GTF3C1-201ENST00000356183 CTAGE3PQ8IX95 158 aa12.2□□□□□ -0.46
GTF3C1-201ENST00000356183 TRMT44Q8IYL2 757 aaKnown RBP12.2□□□□□ -0.46
GTF3C1-201ENST00000356183 BCAS4Q8TDM0 211 aa12.2□□□□□ -0.46
GTF3C1-201ENST00000356183 MCM9Q9NXL9 1143 aa12.2□□□□□ -0.46
GTF3C1-201ENST00000356183 PARP2Q9UGN5 583 aa12.2□□□□□ -0.46
GTF3C1-201ENST00000356183 JAG2Q9Y219 1238 aa12.2□□□□□ -0.46
GTF3C1-201ENST00000356183 BUB1O43683 1085 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 ANO1Q5XXA6 986 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 ADAT2Q7Z6V5 191 aaKnown RBP12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 LRGUKQ96M69 825 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 BLZF1Q9H2G9 400 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 PARP1P09874 1014 aaKnown RBP12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 RPS6KB1P23443 525 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 GNA11P29992 359 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 RSAD2Q8WXG1 361 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 ATP2A3Q93084 1043 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 GPCPD1Q9NPB8 672 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 UGGT2Q9NYU1 1516 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 CHMLP26374 656 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 MAGEA1P43355 309 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 ATP8B2P98198 1209 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 TFCP2Q12800 502 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 ANKRD13DQ6ZTN6 518 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 TMTC1Q8IUR5 882 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 INSRP06213 1382 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 DDX39AO00148 427 aaKnown RBP12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 PLCD1P51178 756 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 SLC12A2P55011 1212 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 POLE2P56282 527 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 DYMQ7RTS9 669 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 ATL3Q6DD88 541 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 DCUN1D2Q6PH85 259 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 DPH5Q9H2P9 285 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 PNOCQ13519 176 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 KIF22Q14807 665 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 TSKSQ9UJT2 592 aa12.19□□□□□ -0.46
GTF3C1-201ENST00000356183 LRMPQ12912 555 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 MMEL1Q495T6 779 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 JADE1Q6IE81 842 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 HAUS8Q9BT25 410 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms