RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 C10orf71Q711Q0 1435 aa29.85■■■□□ 2.37
CLK2-201ENST00000355560 KIF28PB7ZC32 967 aa29.84■■■□□ 2.37
CLK2-201ENST00000355560 NT5C2P49902 561 aa29.84■■■□□ 2.37
CLK2-201ENST00000355560 WASF1Q92558 559 aa29.84■■■□□ 2.37
CLK2-201ENST00000355560 MKNK2Q9HBH9 465 aa29.84■■■□□ 2.37
CLK2-201ENST00000355560 TROAPQ12815 778 aa29.84■■■□□ 2.37
CLK2-201ENST00000355560 TRIM29Q14134 588 aa29.84■■■□□ 2.37
CLK2-201ENST00000355560 CRACR2BQ8N4Y2 399 aaPredicted RBP29.84■■■□□ 2.37
CLK2-201ENST00000355560 C7orf43Q8WVR3 580 aa29.84■■■□□ 2.37
CLK2-201ENST00000355560 MYH1P12882 1939 aa29.84■■■□□ 2.37
CLK2-201ENST00000355560 DDAH1O94760 285 aa29.83■■■□□ 2.37
CLK2-201ENST00000355560 CALM1P0DP23 149 aa29.83■■■□□ 2.37
CLK2-201ENST00000355560 CALM2P0DP24 149 aa29.83■■■□□ 2.37
CLK2-201ENST00000355560 CALM3P0DP25 149 aa29.83■■■□□ 2.37
CLK2-201ENST00000355560 TFAP4Q01664 338 aa29.83■■■□□ 2.37
CLK2-201ENST00000355560 SLC44A5Q8NCS7 719 aa29.83■■■□□ 2.37
CLK2-201ENST00000355560 PGBD1Q96JS3 809 aa29.83■■■□□ 2.37
CLK2-201ENST00000355560 GUCY1A2P33402 732 aa29.83■■■□□ 2.37
CLK2-201ENST00000355560 RCOR1Q9UKL0 485 aa29.82■■■□□ 2.36
CLK2-201ENST00000355560 SCNN1DP51172 638 aa29.81■■■□□ 2.36
CLK2-201ENST00000355560 KCNQ5Q9NR82 932 aa29.81■■■□□ 2.36
CLK2-201ENST00000355560 ADAMTSL1Q8N6G6 1762 aa29.81■■■□□ 2.36
CLK2-201ENST00000355560 SNED1Q8TER0 1413 aa29.81■■■□□ 2.36
CLK2-201ENST00000355560 DEXIO95424 95 aa29.81■■■□□ 2.36
CLK2-201ENST00000355560 MYSM1Q5VVJ2 828 aa29.81■■■□□ 2.36
CLK2-201ENST00000355560 RBM28Q9NW13 759 aaKnown RBP29.81■■■□□ 2.36
CLK2-201ENST00000355560 SCN9AQ15858 1988 aa29.81■■■□□ 2.36
CLK2-201ENST00000355560 MYH6P13533 1939 aa29.81■■■□□ 2.36
CLK2-201ENST00000355560 ECE2O60344 883 aa29.8■■■□□ 2.36
CLK2-201ENST00000355560 LIG1P18858 919 aa29.8■■■□□ 2.36
CLK2-201ENST00000355560 BICD2Q8TD16 824 aa29.8■■■□□ 2.36
CLK2-201ENST00000355560 RCSD1Q6JBY9 416 aa29.8■■■□□ 2.36
CLK2-201ENST00000355560 ZNF287Q9HBT7 754 aa29.8■■■□□ 2.36
CLK2-201ENST00000355560 TSPY3P0CV98 308 aa29.79■■■□□ 2.36
CLK2-201ENST00000355560 TSPY8P0CW00 308 aa29.79■■■□□ 2.36
CLK2-201ENST00000355560 ZNF444Q8N0Y2 327 aaPredicted RBP29.79■■■□□ 2.36
CLK2-201ENST00000355560 RNF26Q9BY78 433 aaPredicted RBP29.79■■■□□ 2.36
CLK2-201ENST00000355560 IL17RBQ9NRM6 502 aa29.79■■■□□ 2.36
CLK2-201ENST00000355560 GNL2Q13823 731 aaKnown RBP29.78■■■□□ 2.36
CLK2-201ENST00000355560 AOC3Q16853 763 aa29.78■■■□□ 2.36
CLK2-201ENST00000355560 CC2D2BQ6DHV5 1058 aa29.78■■■□□ 2.36
CLK2-201ENST00000355560 C16orf86Q6ZW13 317 aa29.78■■■□□ 2.36
CLK2-201ENST00000355560 RTEL1Q9NZ71 1219 aa29.78■■■□□ 2.36
CLK2-201ENST00000355560 LETM1O95202 739 aaPredicted RBP29.78■■■□□ 2.36
CLK2-201ENST00000355560 RASA1P20936 1047 aa29.78■■■□□ 2.36
CLK2-201ENST00000355560 PICALMQ13492 652 aa29.78■■■□□ 2.36
CLK2-201ENST00000355560 TEKT1Q969V4 418 aa29.78■■■□□ 2.36
CLK2-201ENST00000355560 RBSNQ9H1K0 784 aa29.78■■■□□ 2.36
CLK2-201ENST00000355560 PLEKHA8P1O95397 391 aa29.77■■■□□ 2.36
CLK2-201ENST00000355560 STRIP1Q5VSL9 837 aa29.77■■■□□ 2.36
CLK2-201ENST00000355560 HHIPL2Q6UWX4 724 aa29.77■■■□□ 2.36
CLK2-201ENST00000355560 DGKHQ86XP1 1220 aa29.77■■■□□ 2.36
CLK2-201ENST00000355560 CTCFLQ8NI51 663 aaPredicted RBP29.77■■■□□ 2.36
CLK2-201ENST00000355560 SLC16A10Q8TF71 515 aa29.77■■■□□ 2.36
CLK2-201ENST00000355560 C21orf2O43822 256 aa29.77■■■□□ 2.36
CLK2-201ENST00000355560 NASPP49321 788 aaPredicted RBP29.77■■■□□ 2.36
CLK2-201ENST00000355560 CDK8P49336 464 aa29.77■■■□□ 2.36
CLK2-201ENST00000355560 USP17L3A6NCW0 530 aa29.76■■■□□ 2.35
CLK2-201ENST00000355560 USP17L4A6NCW7 530 aa29.76■■■□□ 2.35
CLK2-201ENST00000355560 AKAP17AQ02040 695 aaKnown RBP29.76■■■□□ 2.35
CLK2-201ENST00000355560 FUT2Q10981 343 aa29.76■■■□□ 2.35
CLK2-201ENST00000355560 USP17L1Q7RTZ2 530 aa29.76■■■□□ 2.35
CLK2-201ENST00000355560 KAT14Q9H8E8 782 aa29.76■■■□□ 2.35
CLK2-201ENST00000355560 POLR3EQ9NVU0 708 aa29.76■■■□□ 2.35
CLK2-201ENST00000355560 ZNF646O15015 1829 aaPredicted RBP29.76■■■□□ 2.35
CLK2-201ENST00000355560 KIAA2012Q0VF49 1180 aa29.75■■■□□ 2.35
CLK2-201ENST00000355560 TMTC3Q6ZXV5 915 aa29.75■■■□□ 2.35
CLK2-201ENST00000355560 TSPY26PQ9H489 355 aa29.75■■■□□ 2.35
CLK2-201ENST00000355560 DACT1Q9NYF0 836 aa29.75■■■□□ 2.35
CLK2-201ENST00000355560 CLIC4Q9Y696 253 aa29.75■■■□□ 2.35
CLK2-201ENST00000355560 WDHD1O75717 1129 aaPredicted RBP29.75■■■□□ 2.35
CLK2-201ENST00000355560 DACT2Q5SW24 774 aa29.75■■■□□ 2.35
CLK2-201ENST00000355560 TCP11L1Q9NUJ3 509 aa29.75■■■□□ 2.35
CLK2-201ENST00000355560 USP40Q9NVE5 1235 aa29.75■■■□□ 2.35
CLK2-201ENST00000355560 MMP1P03956 469 aa29.74■■■□□ 2.35
CLK2-201ENST00000355560 U2AF2P26368 475 aaKnown RBP eCLIP29.74■■■□□ 2.359e-7■■□□□ 13.7
CLK2-201ENST00000355560 CCDC178Q5BJE1 867 aa29.74■■■□□ 2.35
CLK2-201ENST00000355560 KIAA0825Q8IV33 1275 aa29.74■■■□□ 2.35
CLK2-201ENST00000355560 TTLL6Q8N841 843 aa29.74■■■□□ 2.35
CLK2-201ENST00000355560 SUPT20HQ8NEM7 779 aa29.74■■■□□ 2.35
CLK2-201ENST00000355560 ME1P48163 572 aa29.74■■■□□ 2.35
CLK2-201ENST00000355560 FKBP1AP62942 108 aaKnown RBP29.74■■■□□ 2.35
CLK2-201ENST00000355560 LINC00301Q8NCQ3 95 aa29.74■■■□□ 2.35
CLK2-201ENST00000355560 DDX4Q9NQI0 724 aaKnown RBP29.74■■■□□ 2.35
CLK2-201ENST00000355560 CRKP46108 304 aa29.73■■■□□ 2.35
CLK2-201ENST00000355560 APOBEC3HQ6NTF7 200 aaKnown RBP29.73■■■□□ 2.35
CLK2-201ENST00000355560 ANKS1AQ92625 1134 aa29.73■■■□□ 2.35
CLK2-201ENST00000355560 NUP62CLQ9H1M0 184 aa29.73■■■□□ 2.35
CLK2-201ENST00000355560 KCNJ14Q9UNX9 436 aa29.73■■■□□ 2.35
CLK2-201ENST00000355560 YEATS4O95619 227 aa29.72■■■□□ 2.35
CLK2-201ENST00000355560 STK38Q15208 465 aa29.72■■■□□ 2.35
CLK2-201ENST00000355560 SAFBQ15424 915 aaKnown RBP eCLIP29.72■■■□□ 2.35
CLK2-201ENST00000355560 CDC42EP5Q6NZY7 148 aa29.72■■■□□ 2.35
CLK2-201ENST00000355560 PNMA1Q8ND90 353 aa29.72■■■□□ 2.35
CLK2-201ENST00000355560 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.72■■■□□ 2.35
CLK2-201ENST00000355560 PRPF3O43395 683 aaKnown RBP29.72■■■□□ 2.35
CLK2-201ENST00000355560 DDX19AQ9NUU7 478 aaKnown RBP29.72■■■□□ 2.35
CLK2-201ENST00000355560 CNTNAP5Q8WYK1 1306 aa29.72■■■□□ 2.35
CLK2-201ENST00000355560 PPIP5K2O43314 1243 aa29.71■■■□□ 2.35
CLK2-201ENST00000355560 NR1I2O75469 434 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms