RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 BIRC3Q13489 604 aa18.26■□□□□ 0.51
SHTN1-202ENST00000355371 REXO1Q8N1G1 1221 aaKnown RBP18.26■□□□□ 0.51
SHTN1-202ENST00000355371 GPR108Q9NPR9 543 aa18.26■□□□□ 0.51
SHTN1-202ENST00000355371 RGS12O14924 1447 aa18.26■□□□□ 0.51
SHTN1-202ENST00000355371 SLC9C1Q4G0N8 1177 aa18.26■□□□□ 0.51
SHTN1-202ENST00000355371 CEP128Q6ZU80 1094 aa18.26■□□□□ 0.51
SHTN1-202ENST00000355371 IFNL3Q8IZI9 196 aa18.26■□□□□ 0.51
SHTN1-202ENST00000355371 PPM1EQ8WY54 764 aa18.26■□□□□ 0.51
SHTN1-202ENST00000355371 CSRNP2Q9H175 543 aa18.26■□□□□ 0.51
SHTN1-202ENST00000355371 PKD2L1Q9P0L9 805 aa18.26■□□□□ 0.51
SHTN1-202ENST00000355371 SSX2IPQ9Y2D8 614 aa18.26■□□□□ 0.51
SHTN1-202ENST00000355371 IGSF1Q8N6C5 1336 aa18.26■□□□□ 0.51
SHTN1-202ENST00000355371 HSPD1P10809 573 aaKnown RBP18.26■□□□□ 0.51
SHTN1-202ENST00000355371 SP4Q02446 784 aa18.26■□□□□ 0.51
SHTN1-202ENST00000355371 DDX17Q92841 729 aaKnown RBP18.26■□□□□ 0.51
SHTN1-202ENST00000355371 VPS18Q9P253 973 aa18.26■□□□□ 0.51
SHTN1-202ENST00000355371 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.26■□□□□ 0.51
SHTN1-202ENST00000355371 ZMYM6O95789 1325 aa18.26■□□□□ 0.51
SHTN1-202ENST00000355371 MCTP2Q6DN12 878 aa18.26■□□□□ 0.51
SHTN1-202ENST00000355371 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.26■□□□□ 0.51
SHTN1-202ENST00000355371 EDC3Q96F86 508 aaKnown RBP18.26■□□□□ 0.51
SHTN1-202ENST00000355371 NOX5Q96PH1 765 aa18.26■□□□□ 0.51
SHTN1-202ENST00000355371 ZSCAN10Q96SZ4 725 aaPredicted RBP18.26■□□□□ 0.51
SHTN1-202ENST00000355371 MAPK8IP1Q9UQF2 711 aa18.26■□□□□ 0.51
SHTN1-202ENST00000355371 FBF1Q8TES7 1133 aa18.25■□□□□ 0.51
SHTN1-202ENST00000355371 SELENOSQ9BQE4 189 aa18.25■□□□□ 0.51
SHTN1-202ENST00000355371 CIAO1O76071 339 aa18.25■□□□□ 0.51
SHTN1-202ENST00000355371 PDE6AP16499 860 aa18.25■□□□□ 0.51
SHTN1-202ENST00000355371 CCDC84Q86UT8 332 aaPredicted RBP18.25■□□□□ 0.51
SHTN1-202ENST00000355371 NELFBQ8WX92 580 aa18.25■□□□□ 0.51
SHTN1-202ENST00000355371 NT5C3AQ9H0P0 336 aa18.25■□□□□ 0.51
SHTN1-202ENST00000355371 OSBPL3Q9H4L5 887 aa18.25■□□□□ 0.51
SHTN1-202ENST00000355371 CCDC169A6NNP5 214 aa18.25■□□□□ 0.51
SHTN1-202ENST00000355371 KRT5P13647 590 aa18.25■□□□□ 0.51
SHTN1-202ENST00000355371 HERC4Q5GLZ8 1057 aaPredicted RBP18.25■□□□□ 0.51
SHTN1-202ENST00000355371 VPS54Q9P1Q0 977 aa18.25■□□□□ 0.51
SHTN1-202ENST00000355371 DPH6Q7L8W6 267 aa18.25■□□□□ 0.51
SHTN1-202ENST00000355371 SECISBP2LQ93073 1101 aaKnown RBP18.25■□□□□ 0.51
SHTN1-202ENST00000355371 VTI1AQ96AJ9 217 aa18.25■□□□□ 0.51
SHTN1-202ENST00000355371 STX10O60499 249 aa18.24■□□□□ 0.51
SHTN1-202ENST00000355371 TTLL7Q6ZT98 887 aa18.24■□□□□ 0.51
SHTN1-202ENST00000355371 NOSTRINQ8IVI9 506 aa18.24■□□□□ 0.51
SHTN1-202ENST00000355371 NUCKS1Q9H1E3 243 aaKnown RBP18.24■□□□□ 0.51
SHTN1-202ENST00000355371 METP08581 1390 aa18.24■□□□□ 0.51
SHTN1-202ENST00000355371 STRN3Q13033 797 aa18.24■□□□□ 0.51
SHTN1-202ENST00000355371 NLRP1Q9C000 1473 aa18.24■□□□□ 0.51
SHTN1-202ENST00000355371 FAM76AQ8TAV0 307 aa18.24■□□□□ 0.51
SHTN1-202ENST00000355371 MAP3K15Q6ZN16 1313 aa18.24■□□□□ 0.51
SHTN1-202ENST00000355371 EBAG9O00559 213 aa18.24■□□□□ 0.51
SHTN1-202ENST00000355371 PCP11498 1178 aaKnown RBP18.24■□□□□ 0.51
SHTN1-202ENST00000355371 ZBED4O75132 1171 aa18.23■□□□□ 0.51
SHTN1-202ENST00000355371 ATP8A2Q9NTI2 1148 aa18.23■□□□□ 0.51
SHTN1-202ENST00000355371 TMEM63CQ9P1W3 806 aa18.23■□□□□ 0.51
SHTN1-202ENST00000355371 SPOPO43791 374 aa18.23■□□□□ 0.51
SHTN1-202ENST00000355371 LIN9Q5TKA1 542 aa18.23■□□□□ 0.51
SHTN1-202ENST00000355371 ZNF354CQ86Y25 554 aa18.23■□□□□ 0.51
SHTN1-202ENST00000355371 LARGE2Q8N3Y3 721 aa18.23■□□□□ 0.51
SHTN1-202ENST00000355371 KIAA1524Q8TCG1 905 aa18.23■□□□□ 0.51
SHTN1-202ENST00000355371 CEP63Q96MT8 703 aa18.23■□□□□ 0.51
SHTN1-202ENST00000355371 TPCN1Q9ULQ1 816 aa18.23■□□□□ 0.51
SHTN1-202ENST00000355371 UBE3CQ15386 1083 aa18.23■□□□□ 0.51
SHTN1-202ENST00000355371 CCDC51Q96ER9 411 aa18.23■□□□□ 0.51
SHTN1-202ENST00000355371 TAB2Q9NYJ8 693 aa18.23■□□□□ 0.51
SHTN1-202ENST00000355371 USP17L12C9JPN9 530 aa18.23■□□□□ 0.51
SHTN1-202ENST00000355371 USP17L21D6R901 530 aa18.23■□□□□ 0.51
SHTN1-202ENST00000355371 KRT9P35527 623 aa18.23■□□□□ 0.51
SHTN1-202ENST00000355371 CCDC114Q96M63 670 aa18.23■□□□□ 0.51
SHTN1-202ENST00000355371 KDM3AQ9Y4C1 1321 aa18.23■□□□□ 0.51
SHTN1-202ENST00000355371 ADCY9O60503 1353 aa18.23■□□□□ 0.51
SHTN1-202ENST00000355371 ATP2C2O75185 946 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 FAM47AQ5JRC9 791 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 GALNT17Q6IS24 598 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 CCDC121Q6ZUS5 278 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 MTMR6Q9Y217 621 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 KAT6BQ8WYB5 2073 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 MED23Q9ULK4 1368 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 C8orf74Q6P047 294 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 UBL4BQ8N7F7 174 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 FANCBQ8NB91 859 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 MAK16Q9BXY0 300 aaKnown RBP18.22■□□□□ 0.51
SHTN1-202ENST00000355371 KIAA1468Q9P260 1216 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 PALD1Q9ULE6 856 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 GNA14O95837 355 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 CLUL1Q15846 466 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 GPR161Q8N6U8 529 aaKnown RBP18.22■□□□□ 0.51
SHTN1-202ENST00000355371 SERTAD1Q9UHV2 236 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 TSKSQ9UJT2 592 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 GJA3Q9Y6H8 435 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 PFKFB1P16118 471 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 SMCO2A6NFE2 343 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 ACTN4O43707 911 aaKnown RBP18.22■□□□□ 0.51
SHTN1-202ENST00000355371 ATP2B4P23634 1241 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 ATP5DP30049 168 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 KCNG1Q9UIX4 513 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 ZNF521Q96K83 1311 aa18.22■□□□□ 0.51
SHTN1-202ENST00000355371 DDAH1O94760 285 aa18.21■□□□□ 0.51
SHTN1-202ENST00000355371 USP6P35125 1406 aa18.21■□□□□ 0.51
SHTN1-202ENST00000355371 CCDC14Q49A88 953 aa18.21■□□□□ 0.51
SHTN1-202ENST00000355371 LSG1Q9H089 658 aaKnown RBP18.21■□□□□ 0.51
SHTN1-202ENST00000355371 USP21Q9UK80 565 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms