RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 A0A1W2PQD8 194 aa15.8■□□□□ 0.12
EBF3-201ENST00000355311 IL6STP40189 918 aaPredicted RBP15.8■□□□□ 0.12
EBF3-201ENST00000355311 AKAP17AQ02040 695 aaKnown RBP15.8■□□□□ 0.12
EBF3-201ENST00000355311 PAXIP1Q6ZW49 1069 aaPredicted RBP15.8■□□□□ 0.12
EBF3-201ENST00000355311 KARSQ15046 597 aaKnown RBP15.8■□□□□ 0.12
EBF3-201ENST00000355311 ZNF397Q8NF99 534 aaPredicted RBP15.8■□□□□ 0.12
EBF3-201ENST00000355311 A0A087X0B3 334 aa15.79■□□□□ 0.12
EBF3-201ENST00000355311 VWA3AA6NCI4 1184 aa15.79■□□□□ 0.12
EBF3-201ENST00000355311 CDKL5O76039 1030 aa15.79■□□□□ 0.12
EBF3-201ENST00000355311 CAMTA2O94983 1202 aa15.79■□□□□ 0.12
EBF3-201ENST00000355311 ERCC3P19447 782 aa15.79■□□□□ 0.12
EBF3-201ENST00000355311 MTF1Q14872 753 aa15.79■□□□□ 0.12
EBF3-201ENST00000355311 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.79■□□□□ 0.12
EBF3-201ENST00000355311 AMIGO3Q86WK7 504 aa15.79■□□□□ 0.12
EBF3-201ENST00000355311 ZCCHC17Q9NP64 241 aaKnown RBP15.79■□□□□ 0.12
EBF3-201ENST00000355311 ADAMTS7Q9UKP4 1686 aa15.79■□□□□ 0.12
EBF3-201ENST00000355311 TFRCP02786 760 aaKnown RBP15.79■□□□□ 0.12
EBF3-201ENST00000355311 OLFM4Q6UX06 510 aa15.79■□□□□ 0.12
EBF3-201ENST00000355311 KRBA2Q6ZNG9 492 aa15.79■□□□□ 0.12
EBF3-201ENST00000355311 ZNF384Q8TF68 577 aa15.79■□□□□ 0.12
EBF3-201ENST00000355311 NFE2L3Q9Y4A8 694 aa15.79■□□□□ 0.12
EBF3-201ENST00000355311 TJP1Q07157 1748 aa15.79■□□□□ 0.12
EBF3-201ENST00000355311 CRACR2BQ8N4Y2 399 aaPredicted RBP15.78■□□□□ 0.12
EBF3-201ENST00000355311 KRI1Q8N9T8 703 aaKnown RBP15.78■□□□□ 0.12
EBF3-201ENST00000355311 GPKOWQ92917 476 aaPredicted RBP eCLIP15.78■□□□□ 0.12
EBF3-201ENST00000355311 DYNLL2Q96FJ2 89 aa15.78■□□□□ 0.12
EBF3-201ENST00000355311 PPP1R13BQ96KQ4 1090 aa15.78■□□□□ 0.12
EBF3-201ENST00000355311 PAXBP1Q9Y5B6 917 aa15.78■□□□□ 0.12
EBF3-201ENST00000355311 MROH5Q6ZUA9 1318 aa15.78■□□□□ 0.12
EBF3-201ENST00000355311 PES1O00541 588 aaKnown RBP15.78■□□□□ 0.12
EBF3-201ENST00000355311 SART3Q15020 963 aaKnown RBP15.78■□□□□ 0.12
EBF3-201ENST00000355311 ENAHQ8N8S7 591 aaPredicted RBP15.78■□□□□ 0.12
EBF3-201ENST00000355311 TMEM87BQ96K49 555 aa15.78■□□□□ 0.12
EBF3-201ENST00000355311 CDHR2Q9BYE9 1310 aa15.78■□□□□ 0.12
EBF3-201ENST00000355311 URI1O94763 535 aaPredicted RBP15.78■□□□□ 0.12
EBF3-201ENST00000355311 MMP1P03956 469 aa15.78■□□□□ 0.12
EBF3-201ENST00000355311 MCM7P33993 719 aa15.78■□□□□ 0.12
EBF3-201ENST00000355311 IFIT1BQ5T764 474 aaKnown RBP15.78■□□□□ 0.12
EBF3-201ENST00000355311 TBC1D9BQ66K14 1250 aa15.78■□□□□ 0.12
EBF3-201ENST00000355311 SARM1Q6SZW1 724 aa15.78■□□□□ 0.12
EBF3-201ENST00000355311 ANKRD18AQ8IVF6 992 aa15.78■□□□□ 0.12
EBF3-201ENST00000355311 NOL10Q9BSC4 688 aaKnown RBP15.78■□□□□ 0.12
EBF3-201ENST00000355311 BCL9O00512 1426 aa15.78■□□□□ 0.12
EBF3-201ENST00000355311 TEX33O43247 280 aa15.77■□□□□ 0.12
EBF3-201ENST00000355311 TOP1P11387 765 aaKnown RBP15.77■□□□□ 0.12
EBF3-201ENST00000355311 DHX8Q14562 1220 aaKnown RBP15.77■□□□□ 0.12
EBF3-201ENST00000355311 SLC44A5Q8NCS7 719 aa15.77■□□□□ 0.12
EBF3-201ENST00000355311 USP17L8P0C7I0 530 aa15.77■□□□□ 0.11
EBF3-201ENST00000355311 GOLGA8HP0CJ92 632 aa15.77■□□□□ 0.11
EBF3-201ENST00000355311 MAN1B1Q9UKM7 699 aa15.77■□□□□ 0.11
EBF3-201ENST00000355311 FMNL1O95466 1100 aaPredicted RBP15.76■□□□□ 0.11
EBF3-201ENST00000355311 NTSR2O95665 410 aa15.76■□□□□ 0.11
EBF3-201ENST00000355311 CCT6AP40227 531 aaKnown RBP15.76■□□□□ 0.11
EBF3-201ENST00000355311 GYS2P54840 703 aa15.76■□□□□ 0.11
EBF3-201ENST00000355311 MYL5Q02045 173 aa15.76■□□□□ 0.11
EBF3-201ENST00000355311 DIXDC1Q155Q3 683 aa15.76■□□□□ 0.11
EBF3-201ENST00000355311 PIK3AP1Q6ZUJ8 805 aa15.76■□□□□ 0.11
EBF3-201ENST00000355311 INTS13Q9NVM9 706 aa15.76■□□□□ 0.11
EBF3-201ENST00000355311 SAP30BPQ9UHR5 308 aaKnown RBP15.76■□□□□ 0.11
EBF3-201ENST00000355311 TPM4P67936 248 aa15.76■□□□□ 0.11
EBF3-201ENST00000355311 RESP18Q5W5W9 173 aa15.76■□□□□ 0.11
EBF3-201ENST00000355311 C8orf37Q96NL8 207 aa15.76■□□□□ 0.11
EBF3-201ENST00000355311 MED15Q96RN5 788 aa15.76■□□□□ 0.11
EBF3-201ENST00000355311 AKAP11Q9UKA4 1901 aa15.76■□□□□ 0.11
EBF3-201ENST00000355311 TNS2Q63HR2 1409 aa15.76■□□□□ 0.11
EBF3-201ENST00000355311 SLIT2O94813 1529 aa15.76■□□□□ 0.11
EBF3-201ENST00000355311 FANCGO15287 622 aa15.75■□□□□ 0.11
EBF3-201ENST00000355311 POSTNQ15063 836 aa15.75■□□□□ 0.11
EBF3-201ENST00000355311 JMYQ8N9B5 988 aa15.75■□□□□ 0.11
EBF3-201ENST00000355311 FAM84BQ96KN1 310 aaPredicted RBP15.75■□□□□ 0.11
EBF3-201ENST00000355311 VAT1LQ9HCJ6 419 aa15.75■□□□□ 0.11
EBF3-201ENST00000355311 MINPP1Q9UNW1 487 aa15.75■□□□□ 0.11
EBF3-201ENST00000355311 PLEKHG2Q9H7P9 1386 aa15.75■□□□□ 0.11
EBF3-201ENST00000355311 COL4A1P02462 1669 aa15.75■□□□□ 0.11
EBF3-201ENST00000355311 GRIK5Q16478 980 aa15.75■□□□□ 0.11
EBF3-201ENST00000355311 ATL3Q6DD88 541 aa15.75■□□□□ 0.11
EBF3-201ENST00000355311 KRT23Q9C075 422 aa15.75■□□□□ 0.11
EBF3-201ENST00000355311 LZTFL1Q9NQ48 299 aa15.75■□□□□ 0.11
EBF3-201ENST00000355311 SEC31AO94979 1220 aaKnown RBP15.75■□□□□ 0.11
EBF3-201ENST00000355311 IFNAR1P17181 557 aa15.75■□□□□ 0.11
EBF3-201ENST00000355311 LINC00116Q8NCU8 138 aa15.75■□□□□ 0.11
EBF3-201ENST00000355311 FBXO3Q9UK99 471 aa15.75■□□□□ 0.11
EBF3-201ENST00000355311 PP2D1A8MPX8 630 aa15.74■□□□□ 0.11
EBF3-201ENST00000355311 SLURP2P0DP57 97 aa15.74■□□□□ 0.11
EBF3-201ENST00000355311 ST5P78524 1137 aa15.74■□□□□ 0.11
EBF3-201ENST00000355311 RAD51AP2Q09MP3 1159 aa15.74■□□□□ 0.11
EBF3-201ENST00000355311 NHSL1Q5SYE7 1610 aa15.74■□□□□ 0.11
EBF3-201ENST00000355311 TOGARAM2Q6ZUX3 1019 aa15.74■□□□□ 0.11
EBF3-201ENST00000355311 SYMPKQ92797 1274 aaKnown RBP15.74■□□□□ 0.11
EBF3-201ENST00000355311 SMARCE1Q969G3 411 aa15.74■□□□□ 0.11
EBF3-201ENST00000355311 MCM9Q9NXL9 1143 aa15.74■□□□□ 0.11
EBF3-201ENST00000355311 FBXO2Q9UK22 296 aaPredicted RBP15.74■□□□□ 0.11
EBF3-201ENST00000355311 HPSEQ9Y251 543 aa15.74■□□□□ 0.11
EBF3-201ENST00000355311 USP17L3A6NCW0 530 aa15.73■□□□□ 0.11
EBF3-201ENST00000355311 USP17L4A6NCW7 530 aa15.73■□□□□ 0.11
EBF3-201ENST00000355311 CD44P16070 742 aaKnown RBP15.73■□□□□ 0.11
EBF3-201ENST00000355311 MECOMQ03112 1051 aa15.73■□□□□ 0.11
EBF3-201ENST00000355311 CAVIN4Q5BKX8 364 aa15.73■□□□□ 0.11
EBF3-201ENST00000355311 USP17L1Q7RTZ2 530 aa15.73■□□□□ 0.11
EBF3-201ENST00000355311 SGMS1Q86VZ5 419 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms