RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 POMGNT1Q8WZA1 660 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 CCDC68Q9H2F9 335 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 PIK3AP1Q6ZUJ8 805 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 DENND2AQ9ULE3 1009 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 METTL13Q8N6R0 699 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 HOOK2Q96ED9 719 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 USH1GQ495M9 461 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 SEPT8Q92599 483 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 PSMB7Q99436 277 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 ALDH1L1O75891 902 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 HAUS1Q96CS2 278 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 OGFRQ9NZT2 677 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 SPECC1L-ADORA2AF8WAN1 911 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 MUM1Q2TAK8 710 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 TRAPPC3LQ5T215 181 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 MYO1AQ9UBC5 1043 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 TSTA3Q13630 321 aaPredicted RBP6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 AKAP4Q5JQC9 854 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 TBC1D7Q9P0N9 293 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 CAPN9O14815 690 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 MMEL1Q495T6 779 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 PEX26Q7Z412 305 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 IRAK4Q9NWZ3 460 aa6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 CDR2Q01850 454 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 CCDC93Q567U6 631 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 FAM71BQ8TC56 605 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 SYNRGQ9UMZ2 1314 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 TROVE2P10155 538 aaKnown RBP eCLIP6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 TNNI1P19237 187 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 FAM135AQ9P2D6 1515 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 GBP5Q96PP8 586 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 RABEP2Q9H5N1 569 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 VPS37BQ9H9H4 285 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 TRPC6Q9Y210 931 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 HDAC1Q13547 482 aaPredicted RBP6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 CTAGE3PQ8IX95 158 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 GRIN2BQ13224 1484 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 SNX29Q8TEQ0 813 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 IPO11Q9UI26 975 aaKnown RBP6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 TXKP42681 527 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 YARSP54577 528 aaKnown RBP6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 FNBP4Q8N3X1 1017 aaPredicted RBP6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 MRPL46Q9H2W6 279 aaKnown RBP6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 SLC5A4Q9NY91 659 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 PARP2Q9UGN5 583 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 EHBP1L1Q8N3D4 1523 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 RAB17Q9H0T7 212 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 PPFIA1Q13136 1202 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 ARHGAP42A6NI28 874 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 PHBP35232 272 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 PAK2Q13177 524 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 RPS6KA1Q15418 735 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 JADE1Q6IE81 842 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 ERO1AQ96HE7 468 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 B4E1Z4 1266 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 MBD4O95243 580 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 AK2P54819 239 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 BANK1Q8NDB2 785 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 DNAJC8O75937 253 aaPredicted RBP6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 MX2P20592 715 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 MTMR3Q13615 1198 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 KLHL7Q8IXQ5 586 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 HDAC11Q96DB2 347 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 ARHGAP25P42331 645 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 IL16Q14005 1332 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 DBN1Q16643 649 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 OTUD6AQ7L8S5 288 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 ST7Q9NRC1 585 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 DEXIO95424 95 aa6.39□□□□□ -1.39
SRGAP1-201ENST00000355086 ATXN8OSP0DMR3 200 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 TRIM50Q86XT4 487 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 PALM3A6NDB9 673 aaPredicted RBP6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 RNF40O75150 1001 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 ATP8B2P98198 1209 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 TFCP2Q12800 502 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 CABS1Q96KC9 395 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 CNBD1Q8NA66 436 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 NUCKS1Q9H1E3 243 aaKnown RBP6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 IFNB1P01574 187 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 SAT1P21673 171 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 SLC1A4P43007 532 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 SFMBT2Q5VUG0 894 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 TSKSQ9UJT2 592 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 SUPT6HQ7KZ85 1726 aaKnown RBP6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 FAM193BQ96PV7 902 aaPredicted RBP6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 FAN1Q9Y2M0 1017 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 TCIRG1Q13488 830 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 FAM47CQ5HY64 1035 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 SCYL2Q6P3W7 929 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 KCNH3Q9ULD8 1083 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 ANKRD42Q8N9B4 389 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 PHEXP78562 749 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 NBPF3Q9H094 633 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 BICC1Q9H694 974 aaKnown RBP6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 TTC41PQ6P2S7 1318 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 ARHGAP44Q17R89 818 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 WHAMMP3Q1A5X7 153 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 PHLDB3Q6NSJ2 640 aa6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 SMCR8Q8TEV9 937 aaPredicted RBP6.38□□□□□ -1.39
SRGAP1-201ENST00000355086 Q9H521 79 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms