RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 RBM28Q9NW13 759 aaKnown RBP21.47■■□□□ 1.03
TRIM41-202ENST00000351937 DYNLL2Q96FJ2 89 aa21.47■■□□□ 1.03
TRIM41-202ENST00000351937 TTF2Q9UNY4 1162 aaKnown RBP21.47■■□□□ 1.03
TRIM41-202ENST00000351937 DEXIO95424 95 aa21.46■■□□□ 1.03
TRIM41-202ENST00000351937 PLCD1P51178 756 aa21.46■■□□□ 1.03
TRIM41-202ENST00000351937 TFAP4Q01664 338 aa21.46■■□□□ 1.03
TRIM41-202ENST00000351937 SLC4A8Q2Y0W8 1093 aa21.46■■□□□ 1.03
TRIM41-202ENST00000351937 CCDC178Q5BJE1 867 aa21.46■■□□□ 1.03
TRIM41-202ENST00000351937 SAP30BPQ9UHR5 308 aaKnown RBP21.46■■□□□ 1.03
TRIM41-202ENST00000351937 SLC16A10Q8TF71 515 aa21.46■■□□□ 1.03
TRIM41-202ENST00000351937 PGBD1Q96JS3 809 aa21.46■■□□□ 1.03
TRIM41-202ENST00000351937 PDGFDQ9GZP0 370 aaPredicted RBP21.46■■□□□ 1.03
TRIM41-202ENST00000351937 RTEL1Q9NZ71 1219 aa21.46■■□□□ 1.03
TRIM41-202ENST00000351937 NMT2O60551 498 aa21.45■■□□□ 1.02
TRIM41-202ENST00000351937 CEBPZQ03701 1054 aaKnown RBP21.45■■□□□ 1.02
TRIM41-202ENST00000351937 DGKHQ86XP1 1220 aa21.45■■□□□ 1.02
TRIM41-202ENST00000351937 RNF26Q9BY78 433 aaPredicted RBP21.45■■□□□ 1.02
TRIM41-202ENST00000351937 CDK5RAP2Q96SN8 1893 aa21.45■■□□□ 1.02
TRIM41-202ENST00000351937 FKBP1AP62942 108 aaKnown RBP21.45■■□□□ 1.02
TRIM41-202ENST00000351937 HHIPL2Q6UWX4 724 aa21.45■■□□□ 1.02
TRIM41-202ENST00000351937 ZNF444Q8N0Y2 327 aaPredicted RBP21.45■■□□□ 1.02
TRIM41-202ENST00000351937 DBNDD1Q9H9R9 158 aa21.45■■□□□ 1.02
TRIM41-202ENST00000351937 TCP11L1Q9NUJ3 509 aa21.45■■□□□ 1.02
TRIM41-202ENST00000351937 F8W031 263 aaPredicted RBP21.44■■□□□ 1.02
TRIM41-202ENST00000351937 MYSM1Q5VVJ2 828 aa21.44■■□□□ 1.02
TRIM41-202ENST00000351937 ANKS1AQ92625 1134 aa21.44■■□□□ 1.02
TRIM41-202ENST00000351937 C10orf71Q711Q0 1435 aa21.44■■□□□ 1.02
TRIM41-202ENST00000351937 KIF28PB7ZC32 967 aa21.44■■□□□ 1.02
TRIM41-202ENST00000351937 STRIP1Q5VSL9 837 aa21.44■■□□□ 1.02
TRIM41-202ENST00000351937 FTOQ9C0B1 505 aaKnown RBP eCLIP21.44■■□□□ 1.02
TRIM41-202ENST00000351937 ZNF219Q9P2Y4 722 aaPredicted RBP21.44■■□□□ 1.02
TRIM41-202ENST00000351937 RCSD1Q6JBY9 416 aa21.43■■□□□ 1.02
TRIM41-202ENST00000351937 C16orf86Q6ZW13 317 aa21.43■■□□□ 1.02
TRIM41-202ENST00000351937 SUPT20HQ8NEM7 779 aa21.43■■□□□ 1.02
TRIM41-202ENST00000351937 MXD3Q9BW11 206 aa21.43■■□□□ 1.02
TRIM41-202ENST00000351937 POLR3EQ9NVU0 708 aa21.43■■□□□ 1.02
TRIM41-202ENST00000351937 DDX60LQ5H9U9 1706 aaKnown RBP21.43■■□□□ 1.02
TRIM41-202ENST00000351937 U2AF2P26368 475 aaKnown RBP eCLIP21.43■■□□□ 1.023e-7■■■■□ 19.3
TRIM41-202ENST00000351937 GUCY1A2P33402 732 aa21.43■■□□□ 1.02
TRIM41-202ENST00000351937 GRIPAP1Q4V328 841 aa21.43■■□□□ 1.02
TRIM41-202ENST00000351937 CCDC82Q8N4S0 544 aa21.43■■□□□ 1.02
TRIM41-202ENST00000351937 TSPY3P0CV98 308 aa21.42■■□□□ 1.02
TRIM41-202ENST00000351937 TSPY8P0CW00 308 aa21.42■■□□□ 1.02
TRIM41-202ENST00000351937 LIG1P18858 919 aa21.42■■□□□ 1.02
TRIM41-202ENST00000351937 CMTR1Q8N1G2 835 aaKnown RBP21.42■■□□□ 1.02
TRIM41-202ENST00000351937 CTCFLQ8NI51 663 aaPredicted RBP21.42■■□□□ 1.02
TRIM41-202ENST00000351937 MRIQ9BWK5 157 aa21.42■■□□□ 1.02
TRIM41-202ENST00000351937 IL17RBQ9NRM6 502 aa21.42■■□□□ 1.02
TRIM41-202ENST00000351937 ECM29Q5VYK3 1845 aa21.42■■□□□ 1.02
TRIM41-202ENST00000351937 SNED1Q8TER0 1413 aa21.42■■□□□ 1.02
TRIM41-202ENST00000351937 UBE2Q2LH0YL09 131 aa21.42■■□□□ 1.02
TRIM41-202ENST00000351937 ECE2O60344 883 aa21.42■■□□□ 1.02
TRIM41-202ENST00000351937 AKAP17AQ02040 695 aaKnown RBP21.42■■□□□ 1.02
TRIM41-202ENST00000351937 FUT2Q10981 343 aa21.42■■□□□ 1.02
TRIM41-202ENST00000351937 BICD2Q8TD16 824 aa21.42■■□□□ 1.02
TRIM41-202ENST00000351937 TEKT1Q969V4 418 aa21.42■■□□□ 1.02
TRIM41-202ENST00000351937 RBSNQ9H1K0 784 aa21.42■■□□□ 1.02
TRIM41-202ENST00000351937 TSPY26PQ9H489 355 aa21.42■■□□□ 1.02
TRIM41-202ENST00000351937 YEATS4O95619 227 aa21.42■■□□□ 1.02
TRIM41-202ENST00000351937 RASA1P20936 1047 aa21.42■■□□□ 1.02
TRIM41-202ENST00000351937 NASPP49321 788 aaPredicted RBP21.42■■□□□ 1.02
TRIM41-202ENST00000351937 GNL2Q13823 731 aaKnown RBP21.42■■□□□ 1.02
TRIM41-202ENST00000351937 PRPF3O43395 683 aaKnown RBP21.41■■□□□ 1.02
TRIM41-202ENST00000351937 CDK8P49336 464 aa21.41■■□□□ 1.02
TRIM41-202ENST00000351937 KAT14Q9H8E8 782 aa21.41■■□□□ 1.02
TRIM41-202ENST00000351937 MMP1P03956 469 aa21.41■■□□□ 1.02
TRIM41-202ENST00000351937 KIAA2012Q0VF49 1180 aa21.41■■□□□ 1.02
TRIM41-202ENST00000351937 SAFBQ15424 915 aaKnown RBP eCLIP21.41■■□□□ 1.02
TRIM41-202ENST00000351937 TMTC3Q6ZXV5 915 aa21.41■■□□□ 1.02
TRIM41-202ENST00000351937 LINC00301Q8NCQ3 95 aa21.41■■□□□ 1.02
TRIM41-202ENST00000351937 SLC44A5Q8NCS7 719 aa21.41■■□□□ 1.02
TRIM41-202ENST00000351937 MAP3K14Q99558 947 aa21.41■■□□□ 1.02
TRIM41-202ENST00000351937 KCNQ5Q9NR82 932 aa21.41■■□□□ 1.02
TRIM41-202ENST00000351937 DDX19AQ9NUU7 478 aaKnown RBP21.41■■□□□ 1.02
TRIM41-202ENST00000351937 FOCADQ5VW36 1801 aa21.4■■□□□ 1.02
TRIM41-202ENST00000351937 KCNG4Q8TDN1 519 aa21.4■■□□□ 1.02
TRIM41-202ENST00000351937 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.4■■□□□ 1.02
TRIM41-202ENST00000351937 USP40Q9NVE5 1235 aa21.4■■□□□ 1.02
TRIM41-202ENST00000351937 SCNN1DP51172 638 aa21.4■■□□□ 1.02
TRIM41-202ENST00000351937 DACT2Q5SW24 774 aa21.4■■□□□ 1.02
TRIM41-202ENST00000351937 TTLL6Q8N841 843 aa21.4■■□□□ 1.02
TRIM41-202ENST00000351937 DACT1Q9NYF0 836 aa21.4■■□□□ 1.02
TRIM41-202ENST00000351937 CLIC4Q9Y696 253 aa21.4■■□□□ 1.02
TRIM41-202ENST00000351937 USP17L3A6NCW0 530 aa21.39■■□□□ 1.01
TRIM41-202ENST00000351937 USP17L4A6NCW7 530 aa21.39■■□□□ 1.01
TRIM41-202ENST00000351937 PLEKHA8P1O95397 391 aa21.39■■□□□ 1.01
TRIM41-202ENST00000351937 USP17L1Q7RTZ2 530 aa21.39■■□□□ 1.01
TRIM41-202ENST00000351937 WDHD1O75717 1129 aaPredicted RBP21.39■■□□□ 1.01
TRIM41-202ENST00000351937 XBP1P17861 261 aa21.39■■□□□ 1.01
TRIM41-202ENST00000351937 KIF5BP33176 963 aa21.39■■□□□ 1.01
TRIM41-202ENST00000351937 ME1P48163 572 aa21.39■■□□□ 1.01
TRIM41-202ENST00000351937 HDLBPQ00341 1268 aaKnown RBP21.39■■□□□ 1.01
TRIM41-202ENST00000351937 STK38Q15208 465 aa21.39■■□□□ 1.01
TRIM41-202ENST00000351937 ANO1Q5XXA6 986 aa21.39■■□□□ 1.01
TRIM41-202ENST00000351937 APOBEC3HQ6NTF7 200 aaKnown RBP21.39■■□□□ 1.01
TRIM41-202ENST00000351937 CCDC125Q86Z20 511 aa21.39■■□□□ 1.01
TRIM41-202ENST00000351937 CRKP46108 304 aa21.38■■□□□ 1.01
TRIM41-202ENST00000351937 AOC3Q16853 763 aa21.38■■□□□ 1.01
TRIM41-202ENST00000351937 ZDHHC15Q96MV8 337 aa21.38■■□□□ 1.01
TRIM41-202ENST00000351937 NUP62CLQ9H1M0 184 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms