RNA–Protein interactions for RNA: ENST00000351205.8

SMN1-201, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-201ENST00000351205 BACE1P56817 501 aa20.57■□□□□ 0.88
SMN1-201ENST00000351205 UBE2Q1Q7Z7E8 422 aa20.57■□□□□ 0.88
SMN1-201ENST00000351205 AACSQ86V21 672 aa20.57■□□□□ 0.88
SMN1-201ENST00000351205 ERC1Q8IUD2 1116 aa20.57■□□□□ 0.88
SMN1-201ENST00000351205 MAGEB6Q8N7X4 407 aa20.57■□□□□ 0.88
SMN1-201ENST00000351205 U2AF1L4Q8WU68 220 aaKnown RBP20.57■□□□□ 0.88
SMN1-201ENST00000351205 ANTXR1Q9H6X2 564 aa20.57■□□□□ 0.88
SMN1-201ENST00000351205 TAOK2Q9UL54 1235 aa20.57■□□□□ 0.88
SMN1-201ENST00000351205 H0YGN5 161 aa20.56■□□□□ 0.88
SMN1-201ENST00000351205 ZBTB21Q9ULJ3 1066 aa20.56■□□□□ 0.88
SMN1-201ENST00000351205 RANBP2P49792 3224 aaKnown RBP20.55■□□□□ 0.88
SMN1-201ENST00000351205 IL1RAPL2Q9NP60 686 aa20.55■□□□□ 0.88
SMN1-201ENST00000351205 GINM1Q9NU53 330 aa20.55■□□□□ 0.88
SMN1-201ENST00000351205 TMOD4Q9NZQ9 345 aa20.55■□□□□ 0.88
SMN1-201ENST00000351205 PLXNB2O15031 1838 aa20.55■□□□□ 0.88
SMN1-201ENST00000351205 DDX60LQ5H9U9 1706 aaKnown RBP20.54■□□□□ 0.88
SMN1-201ENST00000351205 USP17L10C9JJH3 530 aa20.54■□□□□ 0.88
SMN1-201ENST00000351205 SGPL1O95470 568 aa20.54■□□□□ 0.88
SMN1-201ENST00000351205 USP5P45974 858 aa20.54■□□□□ 0.88
SMN1-201ENST00000351205 IRX3P78415 501 aaPredicted RBP20.54■□□□□ 0.88
SMN1-201ENST00000351205 MAP3K12Q12852 859 aa20.54■□□□□ 0.88
SMN1-201ENST00000351205 CERS3Q8IU89 383 aa20.54■□□□□ 0.88
SMN1-201ENST00000351205 COLQQ9Y215 455 aaPredicted RBP20.54■□□□□ 0.88
SMN1-201ENST00000351205 C19orf81C9J6K1 198 aa20.53■□□□□ 0.88
SMN1-201ENST00000351205 FARP2O94887 1054 aaPredicted RBP20.53■□□□□ 0.88
SMN1-201ENST00000351205 HOXA7P31268 230 aaPredicted RBP20.53■□□□□ 0.88
SMN1-201ENST00000351205 RHPN1Q8TCX5 695 aa20.53■□□□□ 0.88
SMN1-201ENST00000351205 DPF3Q92784 378 aa20.53■□□□□ 0.88
SMN1-201ENST00000351205 MORF4L1Q9UBU8 362 aa20.53■□□□□ 0.88
SMN1-201ENST00000351205 NAV1Q8NEY1 1877 aa20.53■□□□□ 0.88
SMN1-201ENST00000351205 TRIOBPQ9H2D6 2365 aa20.53■□□□□ 0.88
SMN1-201ENST00000351205 MS4A1P11836 297 aa20.52■□□□□ 0.88
SMN1-201ENST00000351205 HSP90AB4PQ58FF6 505 aa20.52■□□□□ 0.88
SMN1-201ENST00000351205 DEFB118Q96PH6 123 aa20.52■□□□□ 0.88
SMN1-201ENST00000351205 P2RX7Q99572 595 aaKnown RBP20.52■□□□□ 0.88
SMN1-201ENST00000351205 PAK6Q9NQU5 681 aaPredicted RBP20.52■□□□□ 0.88
SMN1-201ENST00000351205 PEX10O60683 326 aa20.51■□□□□ 0.87
SMN1-201ENST00000351205 GH2P01242 217 aa20.51■□□□□ 0.87
SMN1-201ENST00000351205 HERVK_113P62684 666 aa20.51■□□□□ 0.87
SMN1-201ENST00000351205 TMED8Q6PL24 325 aaPredicted RBP20.51■□□□□ 0.87
SMN1-201ENST00000351205 RIOK1Q9BRS2 568 aaKnown RBP20.51■□□□□ 0.87
SMN1-201ENST00000351205 HTATIP2Q9BUP3 242 aa20.51■□□□□ 0.87
SMN1-201ENST00000351205 TXNRD2Q9NNW7 524 aa20.51■□□□□ 0.87
SMN1-201ENST00000351205 SERPINB13Q9UIV8 391 aa20.51■□□□□ 0.87
SMN1-201ENST00000351205 GJD2Q9UKL4 321 aa20.51■□□□□ 0.87
SMN1-201ENST00000351205 SZT2Q5T011 3432 aa20.5■□□□□ 0.87
SMN1-201ENST00000351205 APBB1O00213 710 aa20.5■□□□□ 0.87
SMN1-201ENST00000351205 TATDN1Q6P1N9 297 aa20.5■□□□□ 0.87
SMN1-201ENST00000351205 EHD4Q9H223 541 aa20.5■□□□□ 0.87
SMN1-201ENST00000351205 EMILIN3Q9NT22 766 aa20.5■□□□□ 0.87
SMN1-201ENST00000351205 TFRCP02786 760 aaKnown RBP20.49■□□□□ 0.87
SMN1-201ENST00000351205 HMGCRP04035 888 aa20.49■□□□□ 0.87
SMN1-201ENST00000351205 FXR1P51114 621 aaKnown RBP eCLIP20.49■□□□□ 0.87
SMN1-201ENST00000351205 USP17L2Q6R6M4 530 aa20.49■□□□□ 0.87
SMN1-201ENST00000351205 SIRT2Q8IXJ6 389 aa20.49■□□□□ 0.87
SMN1-201ENST00000351205 RPAP2Q8IXW5 612 aaPredicted RBP20.49■□□□□ 0.87
SMN1-201ENST00000351205 CLASRPQ8N2M8 674 aaKnown RBP20.49■□□□□ 0.87
SMN1-201ENST00000351205 KIF1BPQ96EK5 621 aa20.49■□□□□ 0.87
SMN1-201ENST00000351205 DDX19BQ9UMR2 479 aa20.49■□□□□ 0.87
SMN1-201ENST00000351205 COG6Q9Y2V7 657 aa20.49■□□□□ 0.87
SMN1-201ENST00000351205 MAGEB6P1A0A0J9YX57 407 aa20.48■□□□□ 0.87
SMN1-201ENST00000351205 PDE6AP16499 860 aa20.48■□□□□ 0.87
SMN1-201ENST00000351205 TTF1Q15361 905 aaPredicted RBP20.48■□□□□ 0.87
SMN1-201ENST00000351205 TTC6Q86TZ1 520 aa20.48■□□□□ 0.87
SMN1-201ENST00000351205 GPRC5AQ8NFJ5 357 aa20.48■□□□□ 0.87
SMN1-201ENST00000351205 CRISPLD2Q9H0B8 497 aa20.48■□□□□ 0.87
SMN1-201ENST00000351205 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.48■□□□□ 0.87
SMN1-201ENST00000351205 ZBTB40Q9NUA8 1239 aa20.48■□□□□ 0.87
SMN1-201ENST00000351205 RBPJLQ9UBG7 517 aa20.48■□□□□ 0.87
SMN1-201ENST00000351205 HMMRO75330 724 aa20.47■□□□□ 0.87
SMN1-201ENST00000351205 PLCD1P51178 756 aa20.47■□□□□ 0.87
SMN1-201ENST00000351205 TRIM32Q13049 653 aa20.47■□□□□ 0.87
SMN1-201ENST00000351205 RAB3GAP1Q15042 981 aa20.47■□□□□ 0.87
SMN1-201ENST00000351205 CERKLQ49MI3 558 aaPredicted RBP20.47■□□□□ 0.87
SMN1-201ENST00000351205 SLC9C2Q5TAH2 1124 aa20.47■□□□□ 0.87
SMN1-201ENST00000351205 CHRDL2Q6WN34 429 aa20.47■□□□□ 0.87
SMN1-201ENST00000351205 DNAJC2Q99543 621 aaKnown RBP20.47■□□□□ 0.87
SMN1-201ENST00000351205 BCL11AQ9H165 835 aa20.47■□□□□ 0.87
SMN1-201ENST00000351205 ALPK3Q96L96 1907 aa20.47■□□□□ 0.87
SMN1-201ENST00000351205 GOLIM4O00461 696 aa20.46■□□□□ 0.87
SMN1-201ENST00000351205 IFIT2P09913 472 aaKnown RBP20.46■□□□□ 0.87
SMN1-201ENST00000351205 CAPN2P17655 700 aa20.46■□□□□ 0.87
SMN1-201ENST00000351205 CYP2B6P20813 491 aa20.46■□□□□ 0.87
SMN1-201ENST00000351205 SHMT1P34896 483 aa20.46■□□□□ 0.87
SMN1-201ENST00000351205 ERVK-9P63128 1117 aa20.46■□□□□ 0.87
SMN1-201ENST00000351205 ERVK-24P63145 666 aa20.46■□□□□ 0.87
SMN1-201ENST00000351205 ZYXQ15942 572 aaKnown RBP20.46■□□□□ 0.87
SMN1-201ENST00000351205 ABCB5Q2M3G0 1257 aa20.46■□□□□ 0.87
SMN1-201ENST00000351205 POTEEQ6S8J3 1075 aa20.46■□□□□ 0.87
SMN1-201ENST00000351205 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.46■□□□□ 0.87
SMN1-201ENST00000351205 TRIB2Q92519 343 aa20.46■□□□□ 0.87
SMN1-201ENST00000351205 C12orf42Q96LP6 360 aa20.46■□□□□ 0.87
SMN1-201ENST00000351205 FEZ1Q99689 392 aa20.46■□□□□ 0.87
SMN1-201ENST00000351205 PAGR1Q9BTK6 254 aa20.46■□□□□ 0.87
SMN1-201ENST00000351205 ZNF532Q9HCE3 1301 aa20.46■□□□□ 0.87
SMN1-201ENST00000351205 Q3C1V9 767 aa20.45■□□□□ 0.86
SMN1-201ENST00000351205 GTF3C2Q8WUA4 911 aaPredicted RBP20.45■□□□□ 0.86
SMN1-201ENST00000351205 PORCNQ9H237 461 aa20.45■□□□□ 0.86
SMN1-201ENST00000351205 RPTORQ8N122 1335 aa20.45■□□□□ 0.86
SMN1-201ENST00000351205 TCRBV5S4A2TA0A5A2 114 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms