RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 SLC35F6Q8N357 371 aa16.93■□□□□ 0.3
COG3-201ENST00000349995 CCDC63Q8NA47 563 aa16.93■□□□□ 0.3
COG3-201ENST00000349995 SLAIN2Q9P270 581 aa16.93■□□□□ 0.3
COG3-201ENST00000349995 ZNF652Q9Y2D9 606 aa16.93■□□□□ 0.3
COG3-201ENST00000349995 SETDB1Q15047 1291 aa16.93■□□□□ 0.3
COG3-201ENST00000349995 INTS8Q75QN2 995 aaKnown RBP16.93■□□□□ 0.3
COG3-201ENST00000349995 DAAM2Q86T65 1068 aa16.93■□□□□ 0.3
COG3-201ENST00000349995 VSIG1Q86XK7 387 aa16.93■□□□□ 0.3
COG3-201ENST00000349995 UNC5CLQ8IV45 518 aa16.93■□□□□ 0.3
COG3-201ENST00000349995 SLC26A6Q9BXS9 759 aa16.93■□□□□ 0.3
COG3-201ENST00000349995 MMRN2Q9H8L6 949 aa16.93■□□□□ 0.3
COG3-201ENST00000349995 GOLGA8KD6RF30 607 aa16.92■□□□□ 0.3
COG3-201ENST00000349995 ENC1O14682 589 aa16.92■□□□□ 0.3
COG3-201ENST00000349995 GBP1P32455 592 aa16.92■□□□□ 0.3
COG3-201ENST00000349995 SLC20A2Q08357 652 aa16.92■□□□□ 0.3
COG3-201ENST00000349995 CTNNBL1Q8WYA6 563 aaPredicted RBP16.92■□□□□ 0.3
COG3-201ENST00000349995 FANCLQ9NW38 375 aa16.92■□□□□ 0.3
COG3-201ENST00000349995 PHKG2P15735 406 aa16.92■□□□□ 0.3
COG3-201ENST00000349995 SH3GL3Q99963 347 aa16.92■□□□□ 0.3
COG3-201ENST00000349995 TAOK3Q9H2K8 898 aa16.92■□□□□ 0.3
COG3-201ENST00000349995 PAG1Q9NWQ8 432 aa16.92■□□□□ 0.3
COG3-201ENST00000349995 TMEM94Q12767 1356 aa16.92■□□□□ 0.3
COG3-201ENST00000349995 PDCLQ13371 301 aa16.92■□□□□ 0.3
COG3-201ENST00000349995 PCDH11XQ9BZA7 1347 aa16.92■□□□□ 0.3
COG3-201ENST00000349995 PCDH11YQ9BZA8 1340 aa16.92■□□□□ 0.3
COG3-201ENST00000349995 SETBP1Q9Y6X0 1596 aa16.92■□□□□ 0.3
COG3-201ENST00000349995 SLC5A1P13866 664 aa16.92■□□□□ 0.3
COG3-201ENST00000349995 IFT20Q8IY31 132 aa16.92■□□□□ 0.3
COG3-201ENST00000349995 RNF10Q8N5U6 811 aaKnown RBP16.92■□□□□ 0.3
COG3-201ENST00000349995 USP28Q96RU2 1077 aa16.92■□□□□ 0.3
COG3-201ENST00000349995 KRT71Q3SY84 523 aa16.91■□□□□ 0.3
COG3-201ENST00000349995 CYP26C1Q6V0L0 522 aa16.91■□□□□ 0.3
COG3-201ENST00000349995 TSC22D3Q99576 134 aa16.91■□□□□ 0.3
COG3-201ENST00000349995 ZPR1O75312 459 aa16.91■□□□□ 0.3
COG3-201ENST00000349995 PLA2G4AP47712 749 aa16.91■□□□□ 0.3
COG3-201ENST00000349995 DDB1Q16531 1140 aa16.91■□□□□ 0.3
COG3-201ENST00000349995 DPCR1Q3MIW9 517 aa16.91■□□□□ 0.3
COG3-201ENST00000349995 NAIF1Q69YI7 327 aaPredicted RBP16.91■□□□□ 0.3
COG3-201ENST00000349995 TMTC1Q8IUR5 882 aa16.91■□□□□ 0.3
COG3-201ENST00000349995 PLBD2Q8NHP8 589 aa16.91■□□□□ 0.3
COG3-201ENST00000349995 JAKMIP2Q96AA8 810 aa16.91■□□□□ 0.3
COG3-201ENST00000349995 TRIM7Q9C029 511 aa16.91■□□□□ 0.3
COG3-201ENST00000349995 DONSONQ9NYP3 566 aa16.91■□□□□ 0.3
COG3-201ENST00000349995 PTPRMP28827 1452 aa16.91■□□□□ 0.3
COG3-201ENST00000349995 METAP2P50579 478 aaKnown RBP eCLIP16.91■□□□□ 0.3
COG3-201ENST00000349995 CCDC25Q86WR0 208 aa16.91■□□□□ 0.3
COG3-201ENST00000349995 LCMT1Q9UIC8 334 aa16.91■□□□□ 0.3
COG3-201ENST00000349995 SSRP1Q08945 709 aaKnown RBP16.9■□□□□ 0.3
COG3-201ENST00000349995 ZNF365Q70YC5 407 aa16.9■□□□□ 0.3
COG3-201ENST00000349995 DNAJC10Q8IXB1 793 aa16.9■□□□□ 0.3
COG3-201ENST00000349995 STMN2Q93045 179 aa16.9■□□□□ 0.3
COG3-201ENST00000349995 KIF2CQ99661 725 aa16.9■□□□□ 0.3
COG3-201ENST00000349995 TRIM31Q9BZY9 425 aa16.9■□□□□ 0.3
COG3-201ENST00000349995 EAF2Q96CJ1 260 aaPredicted RBP16.9■□□□□ 0.3
COG3-201ENST00000349995 KIF24Q5T7B8 1368 aa16.9■□□□□ 0.3
COG3-201ENST00000349995 LAMC1P11047 1609 aa16.9■□□□□ 0.3
COG3-201ENST00000349995 SESN3P58005 492 aa16.9■□□□□ 0.3
COG3-201ENST00000349995 IRX1P78414 480 aaPredicted RBP16.9■□□□□ 0.3
COG3-201ENST00000349995 MUM1Q2TAK8 710 aa16.9■□□□□ 0.3
COG3-201ENST00000349995 RUFY4Q6ZNE9 571 aa16.9■□□□□ 0.3
COG3-201ENST00000349995 DZIP3Q86Y13 1208 aaKnown RBP16.9■□□□□ 0.3
COG3-201ENST00000349995 TNNC1P63316 161 aa16.9■□□□□ 0.3
COG3-201ENST00000349995 KLHL7Q8IXQ5 586 aa16.9■□□□□ 0.3
COG3-201ENST00000349995 ARHGEF2Q92974 986 aaKnown RBP16.9■□□□□ 0.3
COG3-201ENST00000349995 ARHGEF40Q8TER5 1519 aa16.89■□□□□ 0.29
COG3-201ENST00000349995 NEURL1BA8MQ27 555 aa16.89■□□□□ 0.29
COG3-201ENST00000349995 SLC9C2Q5TAH2 1124 aa16.89■□□□□ 0.29
COG3-201ENST00000349995 MAPK8IP1Q9UQF2 711 aa16.89■□□□□ 0.29
COG3-201ENST00000349995 SLC12A7Q9Y666 1083 aa16.89■□□□□ 0.29
COG3-201ENST00000349995 MYO1EQ12965 1108 aa16.89■□□□□ 0.29
COG3-201ENST00000349995 TNNI3KQ59H18 835 aa16.89■□□□□ 0.29
COG3-201ENST00000349995 CAVIN4Q5BKX8 364 aa16.89■□□□□ 0.29
COG3-201ENST00000349995 VPS36Q86VN1 386 aa16.89■□□□□ 0.29
COG3-201ENST00000349995 FPGT-TNNI3KV9GXZ4 949 aa16.89■□□□□ 0.29
COG3-201ENST00000349995 CAMSAP1Q5T5Y3 1602 aa16.89■□□□□ 0.29
COG3-201ENST00000349995 NEXMIFQ5QGS0 1516 aa16.89■□□□□ 0.29
COG3-201ENST00000349995 IFIT3O14879 490 aaKnown RBP16.89■□□□□ 0.29
COG3-201ENST00000349995 PAK2Q13177 524 aa16.89■□□□□ 0.29
COG3-201ENST00000349995 SCP2P22307 547 aa16.88■□□□□ 0.29
COG3-201ENST00000349995 PDE1CQ14123 709 aaPredicted RBP16.88■□□□□ 0.29
COG3-201ENST00000349995 TTLL7Q6ZT98 887 aa16.88■□□□□ 0.29
COG3-201ENST00000349995 HOMEZQ8IX15 550 aa16.88■□□□□ 0.29
COG3-201ENST00000349995 IRS4O14654 1257 aaPredicted RBP16.88■□□□□ 0.29
COG3-201ENST00000349995 STX10O60499 249 aa16.88■□□□□ 0.29
COG3-201ENST00000349995 RPS6KB1P23443 525 aa16.88■□□□□ 0.29
COG3-201ENST00000349995 HNRNPH1P31943 449 aaKnown RBP16.88■□□□□ 0.29
COG3-201ENST00000349995 SLC4A8Q2Y0W8 1093 aa16.88■□□□□ 0.29
COG3-201ENST00000349995 FAM167BQ9BTA0 163 aa16.88■□□□□ 0.29
COG3-201ENST00000349995 SELENOOQ9BVL4 669 aa16.88■□□□□ 0.29
COG3-201ENST00000349995 AXIN2Q9Y2T1 843 aa16.88■□□□□ 0.29
COG3-201ENST00000349995 PNOCQ13519 176 aa16.88■□□□□ 0.29
COG3-201ENST00000349995 RASEFQ8IZ41 740 aa16.88■□□□□ 0.29
COG3-201ENST00000349995 THOC1Q96FV9 657 aaKnown RBP16.88■□□□□ 0.29
COG3-201ENST00000349995 DDX27Q96GQ7 796 aaKnown RBP16.88■□□□□ 0.29
COG3-201ENST00000349995 NIP7Q9Y221 180 aaKnown RBP eCLIP16.88■□□□□ 0.29
COG3-201ENST00000349995 RANBP6O60518 1105 aaKnown RBP16.88■□□□□ 0.29
COG3-201ENST00000349995 KCNH3Q9ULD8 1083 aa16.88■□□□□ 0.29
COG3-201ENST00000349995 CORO7P57737 925 aa16.87■□□□□ 0.29
COG3-201ENST00000349995 TTC14Q96N46 770 aa16.87■□□□□ 0.29
COG3-201ENST00000349995 TPCN1Q9ULQ1 816 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms