RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 BPIFA3Q9BQP9 254 aa17.16■□□□□ 0.34
PTBP1-201ENST00000349038 SERTAD1Q9UHV2 236 aa17.16■□□□□ 0.34
PTBP1-201ENST00000349038 ZNF330Q9Y3S2 320 aaPredicted RBP17.16■□□□□ 0.34
PTBP1-201ENST00000349038 LAMA4Q16363 1823 aa17.16■□□□□ 0.34
PTBP1-201ENST00000349038 PTPN12Q05209 780 aaKnown RBP17.16■□□□□ 0.34
PTBP1-201ENST00000349038 SLC9C2Q5TAH2 1124 aa17.16■□□□□ 0.34
PTBP1-201ENST00000349038 PHF8Q9UPP1 1060 aa17.16■□□□□ 0.34
PTBP1-201ENST00000349038 MACROD2A1Z1Q3 448 aa17.16■□□□□ 0.34
PTBP1-201ENST00000349038 KCNJ6P48051 423 aa17.16■□□□□ 0.34
PTBP1-201ENST00000349038 VPS37DQ86XT2 251 aa17.16■□□□□ 0.34
PTBP1-201ENST00000349038 MYD88Q99836 296 aa17.16■□□□□ 0.34
PTBP1-201ENST00000349038 ADAMTS7Q9UKP4 1686 aa17.15■□□□□ 0.34
PTBP1-201ENST00000349038 GOLGA6BA6NDN3 693 aa17.15■□□□□ 0.34
PTBP1-201ENST00000349038 SYF2O95926 243 aaKnown RBP17.15■□□□□ 0.34
PTBP1-201ENST00000349038 MYBL2P10244 700 aa17.15■□□□□ 0.34
PTBP1-201ENST00000349038 PPARAQ07869 468 aa17.15■□□□□ 0.34
PTBP1-201ENST00000349038 KCNV1Q6PIU1 500 aa17.15■□□□□ 0.34
PTBP1-201ENST00000349038 CAPS2Q9BXY5 557 aa17.15■□□□□ 0.34
PTBP1-201ENST00000349038 MYO6Q9UM54 1294 aa17.15■□□□□ 0.34
PTBP1-201ENST00000349038 IKBKBO14920 756 aa17.15■□□□□ 0.34
PTBP1-201ENST00000349038 IRAK1P51617 712 aa17.15■□□□□ 0.34
PTBP1-201ENST00000349038 UBE3BQ7Z3V4 1068 aa17.15■□□□□ 0.34
PTBP1-201ENST00000349038 MMS19Q96T76 1030 aa17.15■□□□□ 0.34
PTBP1-201ENST00000349038 SMARCAL1Q9NZC9 954 aa17.15■□□□□ 0.34
PTBP1-201ENST00000349038 NEDD4P46934 1319 aa17.15■□□□□ 0.34
PTBP1-201ENST00000349038 A0A1W2PQ27 194 aa17.14■□□□□ 0.33
PTBP1-201ENST00000349038 A0A1W2PQ64 194 aa17.14■□□□□ 0.33
PTBP1-201ENST00000349038 A0A1W2PQD8 194 aa17.14■□□□□ 0.33
PTBP1-201ENST00000349038 PRC1O43663 620 aa17.14■□□□□ 0.33
PTBP1-201ENST00000349038 ERCC3P19447 782 aa17.14■□□□□ 0.33
PTBP1-201ENST00000349038 NF2P35240 595 aa17.14■□□□□ 0.33
PTBP1-201ENST00000349038 C2orf54Q08AI8 447 aa17.14■□□□□ 0.33
PTBP1-201ENST00000349038 NEXNQ0ZGT2 675 aa17.14■□□□□ 0.33
PTBP1-201ENST00000349038 IQUBQ8NA54 791 aa17.14■□□□□ 0.33
PTBP1-201ENST00000349038 KCNH5Q8NCM2 988 aa17.14■□□□□ 0.33
PTBP1-201ENST00000349038 METTL22Q9BUU2 404 aaPredicted RBP17.14■□□□□ 0.33
PTBP1-201ENST00000349038 N4BP3O15049 544 aa17.14■□□□□ 0.33
PTBP1-201ENST00000349038 CMA1P23946 247 aa17.14■□□□□ 0.33
PTBP1-201ENST00000349038 USP8P40818 1118 aa17.14■□□□□ 0.33
PTBP1-201ENST00000349038 RNASE9P60153 205 aaKnown RBP17.14■□□□□ 0.33
PTBP1-201ENST00000349038 ANKRD18AQ8IVF6 992 aa17.14■□□□□ 0.33
PTBP1-201ENST00000349038 PCMTD1Q96MG8 357 aaPredicted RBP17.14■□□□□ 0.33
PTBP1-201ENST00000349038 C19orf44Q9H6X5 657 aa17.14■□□□□ 0.33
PTBP1-201ENST00000349038 CXCR5P32302 372 aa17.14■□□□□ 0.33
PTBP1-201ENST00000349038 FXR1P51114 621 aaKnown RBP eCLIP17.14■□□□□ 0.33
PTBP1-201ENST00000349038 SLC39A6Q13433 755 aa17.14■□□□□ 0.33
PTBP1-201ENST00000349038 USP49Q70CQ1 688 aa17.14■□□□□ 0.33
PTBP1-201ENST00000349038 KBTBD3Q8NAB2 608 aa17.14■□□□□ 0.33
PTBP1-201ENST00000349038 RRP36Q96EU6 259 aaKnown RBP17.14■□□□□ 0.33
PTBP1-201ENST00000349038 GNL3LQ9NVN8 582 aaKnown RBP17.14■□□□□ 0.33
PTBP1-201ENST00000349038 PAX7P23759 505 aa17.13■□□□□ 0.33
PTBP1-201ENST00000349038 TRIM29Q14134 588 aa17.13■□□□□ 0.33
PTBP1-201ENST00000349038 RABL6Q3YEC7 729 aaPredicted RBP17.13■□□□□ 0.33
PTBP1-201ENST00000349038 PROSER2Q86WR7 435 aaPredicted RBP17.13■□□□□ 0.33
PTBP1-201ENST00000349038 AIDAQ96BJ3 306 aa17.13■□□□□ 0.33
PTBP1-201ENST00000349038 DSCC1Q9BVC3 393 aa17.13■□□□□ 0.33
PTBP1-201ENST00000349038 KCNJ14Q9UNX9 436 aa17.13■□□□□ 0.33
PTBP1-201ENST00000349038 PALLDQ8WX93 1383 aa17.13■□□□□ 0.33
PTBP1-201ENST00000349038 POTEB2H3BUK9 544 aa17.13■□□□□ 0.33
PTBP1-201ENST00000349038 HPDP32754 393 aaPredicted RBP17.13■□□□□ 0.33
PTBP1-201ENST00000349038 NAA25Q14CX7 972 aa17.13■□□□□ 0.33
PTBP1-201ENST00000349038 ZNF274Q96GC6 653 aaPredicted RBP17.12■□□□□ 0.33
PTBP1-201ENST00000349038 MAN1B1Q9UKM7 699 aa17.12■□□□□ 0.33
PTBP1-201ENST00000349038 FAM170AA1A519 330 aa17.12■□□□□ 0.33
PTBP1-201ENST00000349038 EZH2Q15910 746 aaKnown RBP17.12■□□□□ 0.33
PTBP1-201ENST00000349038 RRP12Q5JTH9 1297 aaKnown RBP17.12■□□□□ 0.33
PTBP1-201ENST00000349038 KIAA1328Q86T90 577 aa17.12■□□□□ 0.33
PTBP1-201ENST00000349038 XAGE3Q8WTP9 111 aa17.12■□□□□ 0.33
PTBP1-201ENST00000349038 CHP1Q99653 195 aa17.12■□□□□ 0.33
PTBP1-201ENST00000349038 TAB2Q9NYJ8 693 aa17.12■□□□□ 0.33
PTBP1-201ENST00000349038 CAMTA1Q9Y6Y1 1673 aa17.12■□□□□ 0.33
PTBP1-201ENST00000349038 PPP1R12BO60237 982 aaPredicted RBP17.12■□□□□ 0.33
PTBP1-201ENST00000349038 PIP4K2BP78356 416 aa17.12■□□□□ 0.33
PTBP1-201ENST00000349038 IFT88Q13099 833 aa17.12■□□□□ 0.33
PTBP1-201ENST00000349038 MED4Q9NPJ6 270 aa17.12■□□□□ 0.33
PTBP1-201ENST00000349038 INCENPQ9NQS7 918 aa17.12■□□□□ 0.33
PTBP1-201ENST00000349038 HELLSQ9NRZ9 838 aa17.12■□□□□ 0.33
PTBP1-201ENST00000349038 C5P01031 1676 aa17.11■□□□□ 0.33
PTBP1-201ENST00000349038 hCG_1642624A0A1W2PR95 340 aa17.11■□□□□ 0.33
PTBP1-201ENST00000349038 CDC25CP30307 473 aa17.11■□□□□ 0.33
PTBP1-201ENST00000349038 CDR1P51861 262 aa17.11■□□□□ 0.33
PTBP1-201ENST00000349038 SEC24CP53992 1094 aa17.11■□□□□ 0.33
PTBP1-201ENST00000349038 KIF23Q02241 960 aaPredicted RBP17.11■□□□□ 0.33
PTBP1-201ENST00000349038 TTC39AQ5SRH9 613 aa17.11■□□□□ 0.33
PTBP1-201ENST00000349038 SELENOOQ9BVL4 669 aa17.11■□□□□ 0.33
PTBP1-201ENST00000349038 HPCAL4Q9UM19 191 aa17.11■□□□□ 0.33
PTBP1-201ENST00000349038 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.11■□□□□ 0.33
PTBP1-201ENST00000349038 YEATS4O95619 227 aa17.11■□□□□ 0.33
PTBP1-201ENST00000349038 HSPD1P10809 573 aaKnown RBP17.11■□□□□ 0.33
PTBP1-201ENST00000349038 KRT9P35527 623 aa17.11■□□□□ 0.33
PTBP1-201ENST00000349038 CCDC122Q5T0U0 273 aa17.11■□□□□ 0.33
PTBP1-201ENST00000349038 NAIF1Q69YI7 327 aaPredicted RBP17.11■□□□□ 0.33
PTBP1-201ENST00000349038 JMYQ8N9B5 988 aa17.11■□□□□ 0.33
PTBP1-201ENST00000349038 CTCFLQ8NI51 663 aaPredicted RBP17.11■□□□□ 0.33
PTBP1-201ENST00000349038 TBC1D31Q96DN5 1066 aa17.11■□□□□ 0.33
PTBP1-201ENST00000349038 RBM33Q96EV2 1170 aaKnown RBP17.11■□□□□ 0.33
PTBP1-201ENST00000349038 STRCP1A6NGW2 1772 aa17.11■□□□□ 0.33
PTBP1-201ENST00000349038 ATP1A1P05023 1023 aaKnown RBP17.1■□□□□ 0.33
PTBP1-201ENST00000349038 BRD2P25440 801 aaKnown RBP17.1■□□□□ 0.33
PTBP1-201ENST00000349038 POSTNQ15063 836 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms