RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 PRC1O43663 620 aa11.69□□□□□ -0.54
CHRNA1-202ENST00000348749 CDC27P30260 824 aa11.69□□□□□ -0.54
CHRNA1-202ENST00000348749 IRAK1P51617 712 aa11.69□□□□□ -0.54
CHRNA1-202ENST00000348749 SETQ01105 290 aaPredicted RBP11.69□□□□□ -0.54
CHRNA1-202ENST00000348749 PPFIA1Q13136 1202 aa11.69□□□□□ -0.54
CHRNA1-202ENST00000348749 STIM1Q13586 685 aa11.69□□□□□ -0.54
CHRNA1-202ENST00000348749 CCDC102BQ68D86 513 aa11.69□□□□□ -0.54
CHRNA1-202ENST00000348749 TTLL5Q6EMB2 1281 aa11.69□□□□□ -0.54
CHRNA1-202ENST00000348749 OTUD7BQ6GQQ9 843 aa11.69□□□□□ -0.54
CHRNA1-202ENST00000348749 CPLX2Q6PUV4 134 aaKnown RBP11.69□□□□□ -0.54
CHRNA1-202ENST00000348749 FOXP4Q8IVH2 680 aaPredicted RBP11.69□□□□□ -0.54
CHRNA1-202ENST00000348749 NOA1Q8NC60 698 aaKnown RBP11.69□□□□□ -0.54
CHRNA1-202ENST00000348749 FAM76AQ8TAV0 307 aa11.69□□□□□ -0.54
CHRNA1-202ENST00000348749 CCDC51Q96ER9 411 aa11.69□□□□□ -0.54
CHRNA1-202ENST00000348749 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.69□□□□□ -0.54
CHRNA1-202ENST00000348749 HOOK1Q9UJC3 728 aaKnown RBP11.69□□□□□ -0.54
CHRNA1-202ENST00000348749 HPS5Q9UPZ3 1129 aa11.69□□□□□ -0.54
CHRNA1-202ENST00000348749 NDUFB9Q9Y6M9 179 aa11.69□□□□□ -0.54
CHRNA1-202ENST00000348749 UBR2Q8IWV8 1755 aa11.69□□□□□ -0.54
CHRNA1-202ENST00000348749 ZMYM6O95789 1325 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 KLF18A0A0U1RQI7 1052 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 GOLGA8BA8MQT2 603 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 INPP5BP32019 993 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 MDM2Q00987 491 aaPredicted RBP11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 SATB1Q01826 763 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 PTPAQ15257 358 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 NT5DC1Q5TFE4 455 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 FBXW10Q5XX13 1052 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 RALYLQ86SE5 291 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 APPBP2Q92624 585 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 KAT14Q9H8E8 782 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 MYO6Q9UM54 1294 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 MEGF6O75095 1541 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 A0A0U1RQJ8 604 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 SHTN1A0MZ66 631 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 M0R2C6 588 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 CHGBP05060 677 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 MARCKSP29966 332 aaPredicted RBP11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 PBX1P40424 430 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 KRT28Q7Z3Y7 464 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 PPFIBP1Q86W92 1011 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 CEP120Q8N960 986 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 TRIML1Q8N9V2 468 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 ATRIPQ8WXE1 791 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 OSBP2Q969R2 916 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 XAGE2Q96GT9 111 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 CABS1Q96KC9 395 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 CARD10Q9BWT7 1032 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 CEP126Q9P2H0 1117 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 MAN1B1Q9UKM7 699 aa11.68□□□□□ -0.54
CHRNA1-202ENST00000348749 ATRNO75882 1429 aa11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 A6NNZ2 444 aa11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 ATP5J2-PTCD1G3V325 749 aa11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 EIF3HO15372 352 aaKnown RBP eCLIP11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 MFAP3LO75121 409 aa11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 PTCD1O75127 700 aaKnown RBP11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 TIMM10P62072 90 aa11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 FMR1Q06787 632 aaKnown RBP eCLIP11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 TUBB8Q3ZCM7 444 aa11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 LONRF3Q496Y0 759 aa11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 SPATS2Q86XZ4 545 aaKnown RBP11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 STRCQ7RTU9 1775 aa11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 GRIN2DO15399 1336 aa11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 AGPSO00116 658 aa11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 ZNF213O14771 459 aa11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 PPFIA3O75145 1194 aa11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 FSBPO95073 299 aa11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 GPTP24298 496 aa11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 FNTAP49354 379 aa11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 SARSP49591 514 aaKnown RBP11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 RBL2Q08999 1139 aa11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 MORC3Q14149 939 aa11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 AMOTL1Q8IY63 956 aa11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 ZNF512BQ96KM6 892 aaPredicted RBP11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 RPGRIP1Q96KN7 1286 aa11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 CDC5LQ99459 802 aaKnown RBP11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 GNL3LQ9NVN8 582 aaKnown RBP11.67□□□□□ -0.54
CHRNA1-202ENST00000348749 PAPPAQ13219 1627 aa11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 STK36Q9NRP7 1315 aa11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 GOLGA6CA6NDK9 693 aa11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 FGAP02671 866 aa11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 TFRCP02786 760 aaKnown RBP11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 GOLGA6DP0CG33 693 aa11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 ERCC5P28715 1186 aaPredicted RBP11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 GGCXP38435 758 aa11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 ARHGAP25P42331 645 aa11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 TDO2P48775 406 aa11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 CABP4P57796 275 aa11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 TTC39AQ5SRH9 613 aa11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 APTXQ7Z2E3 356 aaKnown RBP11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 TRAPPC11Q7Z392 1133 aa11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 CNGA4Q8IV77 575 aa11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 BCAS4Q8TDM0 211 aa11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 MAP3K14Q99558 947 aa11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 CRACR2AQ9BSW2 395 aa11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 CAPS2Q9BXY5 557 aa11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 NLRP2Q9NX02 1062 aa11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 GOLGA6AQ9NYA3 693 aa11.66□□□□□ -0.54
CHRNA1-202ENST00000348749 KCNH3Q9ULD8 1083 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms