RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 WDHD1O75717 1129 aaPredicted RBP23.53■■□□□ 1.36
CHRNA3-202ENST00000348639 CYP2D6P10635 497 aa23.53■■□□□ 1.36
CHRNA3-202ENST00000348639 PPP4CP60510 307 aa23.53■■□□□ 1.36
CHRNA3-202ENST00000348639 TROAPQ12815 778 aa23.53■■□□□ 1.36
CHRNA3-202ENST00000348639 DIXDC1Q155Q3 683 aa23.53■■□□□ 1.36
CHRNA3-202ENST00000348639 GRIK5Q16478 980 aa23.53■■□□□ 1.36
CHRNA3-202ENST00000348639 SLC4A8Q2Y0W8 1093 aa23.53■■□□□ 1.36
CHRNA3-202ENST00000348639 DIS3L2Q8IYB7 885 aaKnown RBP23.53■■□□□ 1.36
CHRNA3-202ENST00000348639 MCM9Q9NXL9 1143 aa23.53■■□□□ 1.36
CHRNA3-202ENST00000348639 BTBD18B2RXH4 712 aa23.52■■□□□ 1.36
CHRNA3-202ENST00000348639 ZNF500O60304 480 aaPredicted RBP23.52■■□□□ 1.36
CHRNA3-202ENST00000348639 BAG3O95817 575 aa23.52■■□□□ 1.36
CHRNA3-202ENST00000348639 LDHCP07864 332 aa23.52■■□□□ 1.36
CHRNA3-202ENST00000348639 IL1R1P14778 569 aa23.52■■□□□ 1.36
CHRNA3-202ENST00000348639 NT5C2P49902 561 aa23.52■■□□□ 1.36
CHRNA3-202ENST00000348639 FUT2Q10981 343 aa23.52■■□□□ 1.36
CHRNA3-202ENST00000348639 POTEAQ6S8J7 498 aa23.52■■□□□ 1.36
CHRNA3-202ENST00000348639 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.52■■□□□ 1.36
CHRNA3-202ENST00000348639 POLLQ9UGP5 575 aa23.52■■□□□ 1.36
CHRNA3-202ENST00000348639 KCNJ14Q9UNX9 436 aa23.52■■□□□ 1.36
CHRNA3-202ENST00000348639 MARCKSP29966 332 aaPredicted RBP23.52■■□□□ 1.36
CHRNA3-202ENST00000348639 AKAP17AQ02040 695 aaKnown RBP23.52■■□□□ 1.36
CHRNA3-202ENST00000348639 NLGN1Q8N2Q7 840 aa23.52■■□□□ 1.36
CHRNA3-202ENST00000348639 AKT1S1Q96B36 256 aa23.52■■□□□ 1.36
CHRNA3-202ENST00000348639 SDF4Q9BRK5 362 aa23.52■■□□□ 1.36
CHRNA3-202ENST00000348639 C6orf229H3BNL8 230 aa23.51■■□□□ 1.35
CHRNA3-202ENST00000348639 USP5P45974 858 aa23.51■■□□□ 1.35
CHRNA3-202ENST00000348639 C12orf60Q5U649 245 aa23.51■■□□□ 1.35
CHRNA3-202ENST00000348639 SH3RF3Q8TEJ3 882 aaPredicted RBP23.51■■□□□ 1.35
CHRNA3-202ENST00000348639 PRPF3O43395 683 aaKnown RBP23.5■■□□□ 1.35
CHRNA3-202ENST00000348639 USP17L8P0C7I0 530 aa23.5■■□□□ 1.35
CHRNA3-202ENST00000348639 TBC1D16Q8TBP0 767 aa23.5■■□□□ 1.35
CHRNA3-202ENST00000348639 ZNF202O95125 648 aa23.5■■□□□ 1.35
CHRNA3-202ENST00000348639 PFKFB1P16118 471 aa23.5■■□□□ 1.35
CHRNA3-202ENST00000348639 FAM47AQ5JRC9 791 aa23.5■■□□□ 1.35
CHRNA3-202ENST00000348639 TMC4Q7Z404 712 aa23.5■■□□□ 1.35
CHRNA3-202ENST00000348639 CERS3Q8IU89 383 aa23.5■■□□□ 1.35
CHRNA3-202ENST00000348639 NOL10Q9BSC4 688 aaKnown RBP23.5■■□□□ 1.35
CHRNA3-202ENST00000348639 ANO10Q9NW15 660 aa23.5■■□□□ 1.35
CHRNA3-202ENST00000348639 MROH7-TTC4A0A0A0MT08 1334 aa23.5■■□□□ 1.35
CHRNA3-202ENST00000348639 PPEF1O14829 653 aaPredicted RBP23.49■■□□□ 1.35
CHRNA3-202ENST00000348639 XBP1P17861 261 aa23.49■■□□□ 1.35
CHRNA3-202ENST00000348639 RXRBP28702 533 aa23.49■■□□□ 1.35
CHRNA3-202ENST00000348639 PKN1Q16512 942 aa23.49■■□□□ 1.35
CHRNA3-202ENST00000348639 RILPL1Q5EBL4 403 aa23.49■■□□□ 1.35
CHRNA3-202ENST00000348639 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.49■■□□□ 1.35
CHRNA3-202ENST00000348639 FAM237AA0A1B0GTK4 181 aa23.48■■□□□ 1.35
CHRNA3-202ENST00000348639 TSPY2A6NKD2 308 aa23.48■■□□□ 1.35
CHRNA3-202ENST00000348639 NMT2O60551 498 aa23.48■■□□□ 1.35
CHRNA3-202ENST00000348639 PLEKHA8P1O95397 391 aa23.48■■□□□ 1.35
CHRNA3-202ENST00000348639 IQCB1Q15051 598 aa23.48■■□□□ 1.35
CHRNA3-202ENST00000348639 C11orf57Q6ZUT1 292 aaPredicted RBP23.48■■□□□ 1.35
CHRNA3-202ENST00000348639 TMTC3Q6ZXV5 915 aa23.48■■□□□ 1.35
CHRNA3-202ENST00000348639 TIGD1Q96MW7 591 aa23.48■■□□□ 1.35
CHRNA3-202ENST00000348639 KIAA1468Q9P260 1216 aa23.48■■□□□ 1.35
CHRNA3-202ENST00000348639 ROBO3Q96MS0 1386 aa23.48■■□□□ 1.35
CHRNA3-202ENST00000348639 CUTAO60888 179 aa23.47■■□□□ 1.35
CHRNA3-202ENST00000348639 TOB1P50616 345 aaPredicted RBP23.47■■□□□ 1.35
CHRNA3-202ENST00000348639 RTFDC1Q9BY42 306 aaPredicted RBP23.47■■□□□ 1.35
CHRNA3-202ENST00000348639 HPSEQ9Y251 543 aa23.47■■□□□ 1.35
CHRNA3-202ENST00000348639 SHC4Q6S5L8 630 aa23.47■■□□□ 1.35
CHRNA3-202ENST00000348639 AMOTL1Q8IY63 956 aa23.47■■□□□ 1.35
CHRNA3-202ENST00000348639 RESP18Q5W5W9 173 aa23.46■■□□□ 1.35
CHRNA3-202ENST00000348639 SP8Q8IXZ3 490 aa23.46■■□□□ 1.35
CHRNA3-202ENST00000348639 CTCFLQ8NI51 663 aaPredicted RBP23.46■■□□□ 1.35
CHRNA3-202ENST00000348639 V9GY48 417 aaPredicted RBP23.46■■□□□ 1.35
CHRNA3-202ENST00000348639 MMP10P09238 476 aa23.45■■□□□ 1.35
CHRNA3-202ENST00000348639 NR5A1Q13285 461 aa23.45■■□□□ 1.35
CHRNA3-202ENST00000348639 MFSD14BQ5SR56 506 aa23.45■■□□□ 1.35
CHRNA3-202ENST00000348639 MSL1Q68DK7 614 aa23.45■■□□□ 1.35
CHRNA3-202ENST00000348639 RCSD1Q6JBY9 416 aa23.45■■□□□ 1.35
CHRNA3-202ENST00000348639 TGFBRAP1Q8WUH2 860 aa23.45■■□□□ 1.35
CHRNA3-202ENST00000348639 PHF20Q9BVI0 1012 aa23.45■■□□□ 1.35
CHRNA3-202ENST00000348639 MYH6P13533 1939 aa23.45■■□□□ 1.35
CHRNA3-202ENST00000348639 RIMBP2O15034 1052 aa23.45■■□□□ 1.34
CHRNA3-202ENST00000348639 SRGNP10124 158 aa23.45■■□□□ 1.34
CHRNA3-202ENST00000348639 SYKP43405 635 aa23.45■■□□□ 1.34
CHRNA3-202ENST00000348639 KRI1Q8N9T8 703 aaKnown RBP23.45■■□□□ 1.34
CHRNA3-202ENST00000348639 OXER1Q8TDS5 423 aa23.45■■□□□ 1.34
CHRNA3-202ENST00000348639 TBC1D22AQ8WUA7 517 aa23.45■■□□□ 1.34
CHRNA3-202ENST00000348639 SHISA4Q96DD7 197 aa23.45■■□□□ 1.34
CHRNA3-202ENST00000348639 PARP3Q9Y6F1 533 aa23.45■■□□□ 1.34
CHRNA3-202ENST00000348639 LRRC37AA6NMS7 1700 aa23.45■■□□□ 1.34
CHRNA3-202ENST00000348639 GPR75-ASB3A0A0A6YYF3 556 aa23.44■■□□□ 1.34
CHRNA3-202ENST00000348639 TFAP4Q01664 338 aa23.44■■□□□ 1.34
CHRNA3-202ENST00000348639 DGKHQ86XP1 1220 aa23.44■■□□□ 1.34
CHRNA3-202ENST00000348639 CEP57L1Q8IYX8 460 aa23.44■■□□□ 1.34
CHRNA3-202ENST00000348639 FLAD1Q8NFF5 587 aa23.44■■□□□ 1.34
CHRNA3-202ENST00000348639 ERCC4Q92889 916 aaPredicted RBP23.44■■□□□ 1.34
CHRNA3-202ENST00000348639 VPS54Q9P1Q0 977 aa23.44■■□□□ 1.34
CHRNA3-202ENST00000348639 ATP6V0A2Q9Y487 856 aa23.44■■□□□ 1.34
CHRNA3-202ENST00000348639 ANKRD31Q8N7Z5 1873 aa23.44■■□□□ 1.34
CHRNA3-202ENST00000348639 CNTNAP5Q8WYK1 1306 aa23.44■■□□□ 1.34
CHRNA3-202ENST00000348639 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.43■■□□□ 1.34
CHRNA3-202ENST00000348639 GOLGA6L19H0YKK7 550 aa23.43■■□□□ 1.34
CHRNA3-202ENST00000348639 TPM3P06753 285 aa23.43■■□□□ 1.34
CHRNA3-202ENST00000348639 BTDP43251 543 aa23.43■■□□□ 1.34
CHRNA3-202ENST00000348639 OLFM4Q6UX06 510 aa23.43■■□□□ 1.34
CHRNA3-202ENST00000348639 ANKS1AQ92625 1134 aa23.43■■□□□ 1.34
CHRNA3-202ENST00000348639 FAM163AQ96GL9 167 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms