RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 ZFYVE9O95405 1425 aa12.35□□□□□ -0.43
SMARCE1-202ENST00000348513 PSMA7O14818 248 aa12.35□□□□□ -0.43
SMARCE1-202ENST00000348513 CIB2O75838 187 aa12.35□□□□□ -0.43
SMARCE1-202ENST00000348513 EIF4G3O43432 1585 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-202ENST00000348513 HIP1RO75146 1068 aa12.34□□□□□ -0.43
SMARCE1-202ENST00000348513 ZNF174Q15697 407 aa12.34□□□□□ -0.43
SMARCE1-202ENST00000348513 FAM43BQ6ZT52 329 aaPredicted RBP12.34□□□□□ -0.43
SMARCE1-202ENST00000348513 DHX32Q7L7V1 743 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-202ENST00000348513 PLBD2Q8NHP8 589 aa12.34□□□□□ -0.43
SMARCE1-202ENST00000348513 PARP1P09874 1014 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-202ENST00000348513 CCDC110Q8TBZ0 833 aa12.34□□□□□ -0.43
SMARCE1-202ENST00000348513 DBNDD2Q9BQY9 259 aa12.34□□□□□ -0.43
SMARCE1-202ENST00000348513 ERBB4Q15303 1308 aa12.34□□□□□ -0.43
SMARCE1-202ENST00000348513 PRDM1O75626 825 aa12.34□□□□□ -0.43
SMARCE1-202ENST00000348513 PPFIA1Q13136 1202 aa12.34□□□□□ -0.43
SMARCE1-202ENST00000348513 PRKG1Q13976 671 aa12.34□□□□□ -0.43
SMARCE1-202ENST00000348513 SLC30A9Q6PML9 568 aa12.34□□□□□ -0.43
SMARCE1-202ENST00000348513 GOLGA8KD6RF30 607 aa12.34□□□□□ -0.43
SMARCE1-202ENST00000348513 TPP2P29144 1249 aaPredicted RBP12.34□□□□□ -0.43
SMARCE1-202ENST00000348513 XAGE2Q96GT9 111 aa12.34□□□□□ -0.43
SMARCE1-202ENST00000348513 METTL22Q9BUU2 404 aaPredicted RBP12.34□□□□□ -0.43
SMARCE1-202ENST00000348513 DENND2AQ9ULE3 1009 aa12.34□□□□□ -0.43
SMARCE1-202ENST00000348513 HIBADHP31937 336 aaKnown RBP12.33□□□□□ -0.43
SMARCE1-202ENST00000348513 INTS8Q75QN2 995 aaKnown RBP12.33□□□□□ -0.43
SMARCE1-202ENST00000348513 BSDC1Q9NW68 430 aaPredicted RBP12.33□□□□□ -0.43
SMARCE1-202ENST00000348513 UHRF1BP1Q6BDS2 1440 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 SEC24BO95487 1268 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 SYT1P21579 422 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 IL13P35225 146 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 TNNI3KQ59H18 835 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 KLHL23Q8NBE8 558 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 THEGQ9P2T0 379 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 SCOCQ9UIL1 159 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 DAAM1Q9Y4D1 1078 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 FPGT-TNNI3KV9GXZ4 949 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 BACH1O14867 736 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 CHMP2AO43633 222 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 PPFIA4O75335 1185 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 CALML3P27482 149 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 LETM2Q2VYF4 491 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 LRRC43Q8N309 656 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 TRIM58Q8NG06 486 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 E7EVH7 732 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 HNRNPCP07910 306 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 CYP2C19P33261 490 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 PRPHP41219 470 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 WDR75Q8IWA0 830 aaKnown RBP12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 PEG3Q9GZU2 1588 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 GOLGA6BA6NDN3 693 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 EYA2O00167 538 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 PPP1R7Q15435 360 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 MYLK4Q86YV6 388 aaPredicted RBP12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 BCAS4Q8TDM0 211 aa12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 ACTR5Q9H9F9 607 aaPredicted RBP12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 AATFQ9NY61 560 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMARCE1-202ENST00000348513 VWA3AA6NCI4 1184 aa12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 GIGYF1O75420 1035 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 SCP2P22307 547 aa12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 CFAP58Q5T655 872 aa12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 GRAMD4Q6IC98 578 aa12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 FCHSD1Q86WN1 690 aa12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 SMC1BQ8NDV3 1235 aa12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 CCHCR1Q8TD31 782 aa12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 CTAGE1Q96RT6 745 aa12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 ZNF215Q9UL58 517 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 GYS2P54840 703 aa12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 STK32BQ9NY57 414 aa12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 USP19O94966 1318 aa12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 PUM3Q15397 648 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 KIAA0753Q2KHM9 967 aa12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 SLC52A2Q9HAB3 445 aa12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 PALMDQ9NP74 551 aa12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 TBX22Q9Y458 520 aa12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 SH3TC1Q8TE82 1336 aa12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 SPECC1L-ADORA2AF8WAN1 911 aa12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 ZBTB7BO15156 539 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 EEF2P13639 858 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 CUL3Q13618 768 aa12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 DTHD1Q6ZMT9 781 aa12.32□□□□□ -0.44
SMARCE1-202ENST00000348513 EFCAB8A8MWE9 144 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 HARSP12081 509 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 ERCC6LQ2NKX8 1250 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 WDR62O43379 1518 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 VPS41P49754 854 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 UBXN1Q04323 297 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 CTDSPL2Q05D32 466 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 LAMB3Q13751 1172 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 HSP90AA5PQ58FG0 334 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 EGFL6Q8IUX8 553 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 TRIML1Q8N9V2 468 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 TBC1D22AQ8WUA7 517 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 SUCLG2Q96I99 432 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 FAM227BQ96M60 508 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 HOMER2Q9NSB8 354 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 GGA1Q9UJY5 639 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 ADAMTS12P58397 1594 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 PDE8AO60658 829 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 CYLC1P35663 651 aaPredicted RBP12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 MAP3K7CLP57077 242 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 TAF11Q15544 211 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms