RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 MSL1Q68DK7 614 aa16.34■□□□□ 0.21
CDK5RAP1-202ENST00000346416 OLFM4Q6UX06 510 aa16.34■□□□□ 0.21
CDK5RAP1-202ENST00000346416 MRPS27Q92552 414 aaKnown RBP16.34■□□□□ 0.21
CDK5RAP1-202ENST00000346416 RNF26Q9BY78 433 aaPredicted RBP16.34■□□□□ 0.21
CDK5RAP1-202ENST00000346416 KCNJ14Q9UNX9 436 aa16.34■□□□□ 0.21
CDK5RAP1-202ENST00000346416 MRVI1Q9Y6F6 885 aa16.34■□□□□ 0.21
CDK5RAP1-202ENST00000346416 GPR75-ASB3A0A0A6YYF3 556 aa16.34■□□□□ 0.21
CDK5RAP1-202ENST00000346416 DDAH1O94760 285 aa16.34■□□□□ 0.21
CDK5RAP1-202ENST00000346416 ALDH1B1P30837 517 aa16.34■□□□□ 0.21
CDK5RAP1-202ENST00000346416 CERS3Q8IU89 383 aa16.34■□□□□ 0.21
CDK5RAP1-202ENST00000346416 AMOTL1Q8IY63 956 aa16.34■□□□□ 0.21
CDK5RAP1-202ENST00000346416 DYNLL2Q96FJ2 89 aa16.34■□□□□ 0.21
CDK5RAP1-202ENST00000346416 FAM205AQ6ZU69 1335 aa16.33■□□□□ 0.21
CDK5RAP1-202ENST00000346416 MYH6P13533 1939 aa16.33■□□□□ 0.21
CDK5RAP1-202ENST00000346416 BTBD18B2RXH4 712 aa16.33■□□□□ 0.21
CDK5RAP1-202ENST00000346416 KINO60870 393 aaKnown RBP16.33■□□□□ 0.21
CDK5RAP1-202ENST00000346416 GTF2IP78347 998 aa16.33■□□□□ 0.21
CDK5RAP1-202ENST00000346416 FUT2Q10981 343 aa16.33■□□□□ 0.21
CDK5RAP1-202ENST00000346416 SLC39A14Q15043 492 aa16.33■□□□□ 0.21
CDK5RAP1-202ENST00000346416 SAFBQ15424 915 aaKnown RBP eCLIP16.33■□□□□ 0.21
CDK5RAP1-202ENST00000346416 NOSTRINQ8IVI9 506 aa16.33■□□□□ 0.21
CDK5RAP1-202ENST00000346416 MAPKAPK5Q8IW41 473 aa16.33■□□□□ 0.21
CDK5RAP1-202ENST00000346416 MPNDQ8N594 471 aa16.33■□□□□ 0.21
CDK5RAP1-202ENST00000346416 COA1Q9GZY4 146 aa16.33■□□□□ 0.21
CDK5RAP1-202ENST00000346416 RBM28Q9NW13 759 aaKnown RBP16.33■□□□□ 0.21
CDK5RAP1-202ENST00000346416 A0A1B0GVL5 298 aa16.33■□□□□ 0.2
CDK5RAP1-202ENST00000346416 ESPNB1AK53 854 aa16.33■□□□□ 0.2
CDK5RAP1-202ENST00000346416 PLEKHA8P1O95397 391 aa16.33■□□□□ 0.2
CDK5RAP1-202ENST00000346416 AKAP17AQ02040 695 aaKnown RBP16.33■□□□□ 0.2
CDK5RAP1-202ENST00000346416 DIS3L2Q8IYB7 885 aaKnown RBP16.33■□□□□ 0.2
CDK5RAP1-202ENST00000346416 FAM163AQ96GL9 167 aaPredicted RBP16.33■□□□□ 0.2
CDK5RAP1-202ENST00000346416 MASTLQ96GX5 879 aa16.33■□□□□ 0.2
CDK5RAP1-202ENST00000346416 ZC3H12CQ9C0D7 883 aaKnown RBP16.33■□□□□ 0.2
CDK5RAP1-202ENST00000346416 USP25Q9UHP3 1055 aa16.33■□□□□ 0.2
CDK5RAP1-202ENST00000346416 ROBO3Q96MS0 1386 aa16.32■□□□□ 0.2
CDK5RAP1-202ENST00000346416 CTAGE5O15320 804 aa16.32■□□□□ 0.2
CDK5RAP1-202ENST00000346416 TFAP4Q01664 338 aa16.32■□□□□ 0.2
CDK5RAP1-202ENST00000346416 RCSD1Q6JBY9 416 aa16.32■□□□□ 0.2
CDK5RAP1-202ENST00000346416 SASS6Q6UVJ0 657 aa16.32■□□□□ 0.2
CDK5RAP1-202ENST00000346416 SLF2Q8IX21 1173 aa16.32■□□□□ 0.2
CDK5RAP1-202ENST00000346416 FMR1NBQ8N0W7 255 aaPredicted RBP16.32■□□□□ 0.2
CDK5RAP1-202ENST00000346416 NAV1Q8NEY1 1877 aa16.32■□□□□ 0.2
CDK5RAP1-202ENST00000346416 MKNK2Q9HBH9 465 aa16.32■□□□□ 0.2
CDK5RAP1-202ENST00000346416 SAP30BPQ9UHR5 308 aaKnown RBP16.32■□□□□ 0.2
CDK5RAP1-202ENST00000346416 COL11A2P13942 1736 aaPredicted RBP16.32■□□□□ 0.2
CDK5RAP1-202ENST00000346416 TNS1Q9HBL0 1735 aaKnown RBP16.32■□□□□ 0.2
CDK5RAP1-202ENST00000346416 PLCG2P16885 1265 aa16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 NT5C2P49902 561 aa16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 PLCD1P51178 756 aa16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 NDUFA8P51970 172 aa16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 AXDND1Q5T1B0 1012 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 DPP8Q6V1X1 898 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 TEX11Q8IYF3 940 aa16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 FAM200AQ8TCP9 573 aa16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 MAP3K14Q99558 947 aa16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 FOXP1Q9H334 677 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 CDK5RAP2Q96SN8 1893 aa16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 GAKO14976 1311 aa16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 PRPF3O43395 683 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 MARCKSP29966 332 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 PTPAQ15257 358 aa16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 PKN1Q16512 942 aa16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 ANO6Q4KMQ2 910 aa16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 TMTC3Q6ZXV5 915 aa16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 CTCFLQ8NI51 663 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 IL17RBQ9NRM6 502 aa16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 V9GY48 417 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP1-202ENST00000346416 hCG_1642624A0A1W2PR95 340 aa16.3■□□□□ 0.2
CDK5RAP1-202ENST00000346416 WDHD1O75717 1129 aaPredicted RBP16.3■□□□□ 0.2
CDK5RAP1-202ENST00000346416 RHBDL3P58872 404 aa16.3■□□□□ 0.2
CDK5RAP1-202ENST00000346416 HS1BP3Q53T59 392 aa16.3■□□□□ 0.2
CDK5RAP1-202ENST00000346416 SLC44A5Q8NCS7 719 aa16.3■□□□□ 0.2
CDK5RAP1-202ENST00000346416 PPP6R2O75170 966 aa16.3■□□□□ 0.2
CDK5RAP1-202ENST00000346416 XBP1P17861 261 aa16.3■□□□□ 0.2
CDK5RAP1-202ENST00000346416 NR5A1Q13285 461 aa16.3■□□□□ 0.2
CDK5RAP1-202ENST00000346416 DGKHQ86XP1 1220 aa16.3■□□□□ 0.2
CDK5RAP1-202ENST00000346416 FBXW7Q969H0 707 aa16.3■□□□□ 0.2
CDK5RAP1-202ENST00000346416 ZNF622Q969S3 477 aaKnown RBP eCLIP16.3■□□□□ 0.22e-11■■■□□ 17.1
CDK5RAP1-202ENST00000346416 TMX4Q9H1E5 349 aaPredicted RBP16.3■□□□□ 0.2
CDK5RAP1-202ENST00000346416 FLT1P17948 1338 aa16.29■□□□□ 0.2
CDK5RAP1-202ENST00000346416 CMA1P23946 247 aa16.29■□□□□ 0.2
CDK5RAP1-202ENST00000346416 ZNF444Q8N0Y2 327 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP1-202ENST00000346416 SRBD1Q8N5C6 995 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP1-202ENST00000346416 JMYQ8N9B5 988 aa16.29■□□□□ 0.2
CDK5RAP1-202ENST00000346416 SHISA4Q96DD7 197 aa16.29■□□□□ 0.2
CDK5RAP1-202ENST00000346416 VPS54Q9P1Q0 977 aa16.29■□□□□ 0.2
CDK5RAP1-202ENST00000346416 BAZ2BQ9UIF8 2168 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP1-202ENST00000346416 ADCY5O95622 1261 aa16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 TSPY3P0CV98 308 aa16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 TSPY8P0CW00 308 aa16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 TOB1P50616 345 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 DOK7Q18PE1 504 aa16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 OXER1Q8TDS5 423 aa16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 KAT14Q9H8E8 782 aa16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 DAGLAQ9Y4D2 1042 aa16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 GOLGB1Q14789 3259 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 RGPD3A6NKT7 1758 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 RGPD4Q7Z3J3 1758 aa16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 USP17L3A6NCW0 530 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 190.9 ms