RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 PPFIBP1Q86W92 1011 aa20.25■□□□□ 0.83
VHL-202ENST00000345392 PANX2Q96RD6 677 aa20.25■□□□□ 0.83
VHL-202ENST00000345392 CDC5LQ99459 802 aaKnown RBP20.25■□□□□ 0.83
VHL-202ENST00000345392 PKD1L3Q7Z443 1732 aa20.25■□□□□ 0.83
VHL-202ENST00000345392 SPATA31A3Q5VYP0 1347 aa20.25■□□□□ 0.83
VHL-202ENST00000345392 TOM1O60784 492 aa20.25■□□□□ 0.83
VHL-202ENST00000345392 IDH1O75874 414 aaKnown RBP20.25■□□□□ 0.83
VHL-202ENST00000345392 PTPREP23469 700 aa20.25■□□□□ 0.83
VHL-202ENST00000345392 NR5A1Q13285 461 aa20.25■□□□□ 0.83
VHL-202ENST00000345392 ATG3Q9NT62 314 aa20.25■□□□□ 0.83
VHL-202ENST00000345392 FAN1Q9Y2M0 1017 aa20.25■□□□□ 0.83
VHL-202ENST00000345392 NUP188Q5SRE5 1749 aa20.25■□□□□ 0.83
VHL-202ENST00000345392 COBLO75128 1261 aa20.24■□□□□ 0.83
VHL-202ENST00000345392 FOXR1Q6PIV2 292 aa20.24■□□□□ 0.83
VHL-202ENST00000345392 CEP112Q8N8E3 955 aa20.24■□□□□ 0.83
VHL-202ENST00000345392 AFMP43652 599 aa20.24■□□□□ 0.83
VHL-202ENST00000345392 PLCD1P51178 756 aa20.24■□□□□ 0.83
VHL-202ENST00000345392 APTXQ7Z2E3 356 aaKnown RBP20.24■□□□□ 0.83
VHL-202ENST00000345392 SRLQ86TD4 932 aa20.24■□□□□ 0.83
VHL-202ENST00000345392 SMYD4Q8IYR2 804 aaPredicted RBP20.24■□□□□ 0.83
VHL-202ENST00000345392 SLC35F6Q8N357 371 aa20.24■□□□□ 0.83
VHL-202ENST00000345392 ACRBPQ8NEB7 543 aa20.24■□□□□ 0.83
VHL-202ENST00000345392 HNRNPLLQ8WVV9 542 aaKnown RBP20.24■□□□□ 0.83
VHL-202ENST00000345392 L1RE1Q9UN81 338 aa20.24■□□□□ 0.83
VHL-202ENST00000345392 RRP15Q9Y3B9 282 aaKnown RBP20.24■□□□□ 0.83
VHL-202ENST00000345392 CASP14P31944 242 aa20.23■□□□□ 0.83
VHL-202ENST00000345392 ADD2P35612 726 aa20.23■□□□□ 0.83
VHL-202ENST00000345392 VSNL1P62760 191 aa20.23■□□□□ 0.83
VHL-202ENST00000345392 DNAJC10Q8IXB1 793 aa20.23■□□□□ 0.83
VHL-202ENST00000345392 SLC12A7Q9Y666 1083 aa20.23■□□□□ 0.83
VHL-202ENST00000345392 SPEF2Q9C093 1822 aa20.23■□□□□ 0.83
VHL-202ENST00000345392 ACTN4O43707 911 aaKnown RBP20.23■□□□□ 0.83
VHL-202ENST00000345392 CD44P16070 742 aaKnown RBP20.23■□□□□ 0.83
VHL-202ENST00000345392 METTL24Q5JXM2 366 aa20.23■□□□□ 0.83
VHL-202ENST00000345392 LEKR1Q6ZMV7 388 aa20.23■□□□□ 0.83
VHL-202ENST00000345392 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.23■□□□□ 0.83
VHL-202ENST00000345392 RAB21Q9UL25 225 aa20.23■□□□□ 0.83
VHL-202ENST00000345392 ASAP1Q9ULH1 1129 aa20.23■□□□□ 0.83
VHL-202ENST00000345392 KCPQ6ZWJ8 1503 aa20.23■□□□□ 0.83
VHL-202ENST00000345392 IFIT3O14879 490 aaKnown RBP20.22■□□□□ 0.83
VHL-202ENST00000345392 MMP1P03956 469 aa20.22■□□□□ 0.83
VHL-202ENST00000345392 CTDSPL2Q05D32 466 aa20.22■□□□□ 0.83
VHL-202ENST00000345392 TCIRG1Q13488 830 aa20.22■□□□□ 0.83
VHL-202ENST00000345392 ELOA2Q8IYF1 753 aaPredicted RBP20.22■□□□□ 0.83
VHL-202ENST00000345392 RGS22Q8NE09 1264 aa20.22■□□□□ 0.83
VHL-202ENST00000345392 IPO4Q8TEX9 1081 aaKnown RBP20.22■□□□□ 0.83
VHL-202ENST00000345392 ISCA1Q9BUE6 129 aa20.22■□□□□ 0.83
VHL-202ENST00000345392 CSRNP2Q9H175 543 aa20.22■□□□□ 0.83
VHL-202ENST00000345392 ZSWIM5Q9P217 1185 aa20.22■□□□□ 0.83
VHL-202ENST00000345392 ROBO1Q9Y6N7 1651 aa20.22■□□□□ 0.83
VHL-202ENST00000345392 IFIT5Q13325 482 aaKnown RBP20.22■□□□□ 0.83
VHL-202ENST00000345392 SAFBQ15424 915 aaKnown RBP eCLIP20.22■□□□□ 0.83
VHL-202ENST00000345392 HLFQ16534 295 aa20.22■□□□□ 0.83
VHL-202ENST00000345392 ZKSCAN3Q9BRR0 538 aa20.22■□□□□ 0.83
VHL-202ENST00000345392 GREM2Q9H772 168 aa20.22■□□□□ 0.83
VHL-202ENST00000345392 CTAGE9A4FU28 777 aa20.21■□□□□ 0.83
VHL-202ENST00000345392 USP5P45974 858 aa20.21■□□□□ 0.83
VHL-202ENST00000345392 MSANTD4Q8NCY6 345 aa20.21■□□□□ 0.83
VHL-202ENST00000345392 CCDC102AQ96A19 550 aa20.21■□□□□ 0.83
VHL-202ENST00000345392 TMEM87BQ96K49 555 aa20.21■□□□□ 0.83
VHL-202ENST00000345392 PIH1D3Q9NQM4 214 aaKnown RBP20.21■□□□□ 0.83
VHL-202ENST00000345392 WDR17Q8IZU2 1322 aa20.21■□□□□ 0.83
VHL-202ENST00000345392 DDX60Q8IY21 1712 aaKnown RBP20.21■□□□□ 0.83
VHL-202ENST00000345392 KAT6BQ8WYB5 2073 aa20.21■□□□□ 0.83
VHL-202ENST00000345392 SNAP23O00161 211 aa20.21■□□□□ 0.83
VHL-202ENST00000345392 ERLIN1O75477 346 aa20.21■□□□□ 0.83
VHL-202ENST00000345392 FXR1P51114 621 aaKnown RBP eCLIP20.21■□□□□ 0.83
VHL-202ENST00000345392 OXER1Q8TDS5 423 aa20.21■□□□□ 0.83
VHL-202ENST00000345392 ZNF532Q9HCE3 1301 aa20.21■□□□□ 0.83
VHL-202ENST00000345392 FMNL1O95466 1100 aaPredicted RBP20.2■□□□□ 0.82
VHL-202ENST00000345392 RASGRP2Q7LDG7 609 aa20.2■□□□□ 0.82
VHL-202ENST00000345392 HELBQ8NG08 1087 aaPredicted RBP20.2■□□□□ 0.82
VHL-202ENST00000345392 A0A087X0B3 334 aa20.2■□□□□ 0.82
VHL-202ENST00000345392 ERVV-2B6SEH9 535 aa20.2■□□□□ 0.82
VHL-202ENST00000345392 MFAP3LO75121 409 aa20.2■□□□□ 0.82
VHL-202ENST00000345392 ERCC5P28715 1186 aaPredicted RBP20.2■□□□□ 0.82
VHL-202ENST00000345392 LDHAL6AQ6ZMR3 332 aa20.2■□□□□ 0.82
VHL-202ENST00000345392 TRIML1Q8N9V2 468 aa20.2■□□□□ 0.82
VHL-202ENST00000345392 ADD3Q9UEY8 706 aaKnown RBP20.2■□□□□ 0.82
VHL-202ENST00000345392 TACC3Q9Y6A5 838 aa20.2■□□□□ 0.82
VHL-202ENST00000345392 CASP8Q14790 479 aa20.2■□□□□ 0.82
VHL-202ENST00000345392 SGMS1Q86VZ5 419 aa20.2■□□□□ 0.82
VHL-202ENST00000345392 NOA1Q8NC60 698 aaKnown RBP20.2■□□□□ 0.82
VHL-202ENST00000345392 EPSTI1Q96J88 318 aa20.2■□□□□ 0.82
VHL-202ENST00000345392 CABP5Q9NP86 173 aa20.2■□□□□ 0.82
VHL-202ENST00000345392 EIF3JO75822 258 aaKnown RBP20.19■□□□□ 0.82
VHL-202ENST00000345392 GYPCP04921 128 aa20.19■□□□□ 0.82
VHL-202ENST00000345392 ITGA6P23229 1130 aa20.19■□□□□ 0.82
VHL-202ENST00000345392 CDC25AP30304 524 aa20.19■□□□□ 0.82
VHL-202ENST00000345392 CCT6AP40227 531 aaKnown RBP20.19■□□□□ 0.82
VHL-202ENST00000345392 RILPL1Q5EBL4 403 aa20.19■□□□□ 0.82
VHL-202ENST00000345392 RRP12Q5JTH9 1297 aaKnown RBP20.19■□□□□ 0.82
VHL-202ENST00000345392 SPATA1Q5VX52 437 aa20.19■□□□□ 0.82
VHL-202ENST00000345392 NAA15Q9BXJ9 866 aaKnown RBP20.19■□□□□ 0.82
VHL-202ENST00000345392 WWC3Q9ULE0 1092 aa20.19■□□□□ 0.82
VHL-202ENST00000345392 IL2RBP14784 551 aa20.19■□□□□ 0.82
VHL-202ENST00000345392 PBX1P40424 430 aa20.19■□□□□ 0.82
VHL-202ENST00000345392 SPATA20Q8TB22 786 aa20.19■□□□□ 0.82
VHL-202ENST00000345392 SRPRBQ9Y5M8 271 aaKnown RBP20.19■□□□□ 0.82
VHL-202ENST00000345392 SYNRGQ9UMZ2 1314 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms