RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 POLE2P56282 527 aa13.45□□□□□ -0.26
COL12A1-202ENST00000345356 PTPN21Q16825 1174 aa13.45□□□□□ -0.26
COL12A1-202ENST00000345356 ZNF827Q17R98 1081 aa13.45□□□□□ -0.26
COL12A1-202ENST00000345356 RAB17Q9H0T7 212 aa13.45□□□□□ -0.26
COL12A1-202ENST00000345356 HSPA1LP34931 641 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 GUCY2DQ02846 1103 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 PEX26Q7Z412 305 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 SDCCAG8Q86SQ7 713 aaPredicted RBP13.44□□□□□ -0.26
COL12A1-202ENST00000345356 DDX23Q9BUQ8 820 aaKnown RBP13.44□□□□□ -0.26
COL12A1-202ENST00000345356 GNAQP50148 359 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 PLCD1P51178 756 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 DPCR1Q3MIW9 517 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 ZSWIM6Q9HCJ5 1215 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 CNNM4Q6P4Q7 775 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 SV2BQ7L1I2 683 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 UBL4BQ8N7F7 174 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 FAM207AQ9NSI2 230 aaPredicted RBP13.44□□□□□ -0.26
COL12A1-202ENST00000345356 DEXIO95424 95 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 CYP7A1P22680 504 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 TAF11Q15544 211 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 HIBCHQ6NVY1 386 aaPredicted RBP13.44□□□□□ -0.26
COL12A1-202ENST00000345356 COPS6Q7L5N1 327 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 SAAL1Q96ER3 474 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 ZKSCAN3Q9BRR0 538 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 BLZF1Q9H2G9 400 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 LARSQ9P2J5 1176 aaKnown RBP13.44□□□□□ -0.26
COL12A1-202ENST00000345356 EPN1Q9Y6I3 576 aaPredicted RBP13.44□□□□□ -0.26
COL12A1-202ENST00000345356 PTH1RQ03431 593 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 CLUL1Q15846 466 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 RRAGAQ7L523 313 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 GSDMBQ8TAX9 411 aa13.44□□□□□ -0.26
COL12A1-202ENST00000345356 KCNJ18B7U540 433 aa13.43□□□□□ -0.26
COL12A1-202ENST00000345356 KRT15P19012 456 aa13.43□□□□□ -0.26
COL12A1-202ENST00000345356 CMA1P23946 247 aa13.43□□□□□ -0.26
COL12A1-202ENST00000345356 EPHB4P54760 987 aa13.43□□□□□ -0.26
COL12A1-202ENST00000345356 KCNJ12Q14500 433 aa13.43□□□□□ -0.26
COL12A1-202ENST00000345356 BICDL1Q6ZP65 573 aa13.43□□□□□ -0.26
COL12A1-202ENST00000345356 FERMT1Q9BQL6 677 aa13.43□□□□□ -0.26
COL12A1-202ENST00000345356 ST7Q9NRC1 585 aa13.43□□□□□ -0.26
COL12A1-202ENST00000345356 NPC1L1Q9UHC9 1359 aa13.43□□□□□ -0.26
COL12A1-202ENST00000345356 EIF4A2Q14240 407 aaKnown RBP13.43□□□□□ -0.26
COL12A1-202ENST00000345356 MTHFSDQ2M296 383 aaKnown RBP13.43□□□□□ -0.26
COL12A1-202ENST00000345356 CRACR2BQ8N4Y2 399 aaPredicted RBP13.43□□□□□ -0.26
COL12A1-202ENST00000345356 PHKBQ93100 1093 aa13.43□□□□□ -0.26
COL12A1-202ENST00000345356 BAG2O95816 211 aa13.43□□□□□ -0.26
COL12A1-202ENST00000345356 ERCC3P19447 782 aa13.43□□□□□ -0.26
COL12A1-202ENST00000345356 CYP2C19P33261 490 aa13.43□□□□□ -0.26
COL12A1-202ENST00000345356 KLHL30Q0D2K2 578 aa13.43□□□□□ -0.26
COL12A1-202ENST00000345356 VCX3AQ9NNX9 186 aa13.43□□□□□ -0.26
COL12A1-202ENST00000345356 FAF1Q9UNN5 650 aaPredicted RBP13.43□□□□□ -0.26
COL12A1-202ENST00000345356 B4E1Z4 1266 aa13.43□□□□□ -0.26
COL12A1-202ENST00000345356 ANGEL1Q9UNK9 670 aaKnown RBP13.43□□□□□ -0.26
COL12A1-202ENST00000345356 KCNK3O14649 394 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 TRIM66O15016 1216 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 TNFAIP3P21580 790 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 NNTQ13423 1086 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 SRLQ86TD4 932 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 TSC22D3Q99576 134 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 C6orf50Q9HD87 102 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 MYO1AQ9UBC5 1043 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 CASP14P31944 242 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 CCDC105Q8IYK2 499 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 ERCC5P28715 1186 aaPredicted RBP13.42□□□□□ -0.26
COL12A1-202ENST00000345356 SFMBT2Q5VUG0 894 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 PPP4R3AQ6IN85 833 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 TEX11Q8IYF3 940 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 CRNKL1Q9BZJ0 848 aaKnown RBP13.42□□□□□ -0.26
COL12A1-202ENST00000345356 BUB1O43683 1085 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 INF2Q27J81 1249 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 TRMT2AQ8IZ69 625 aaKnown RBP13.42□□□□□ -0.26
COL12A1-202ENST00000345356 SYCE1Q8N0S2 351 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 DPH5Q9H2P9 285 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 SYNCQ9H7C4 482 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 HDAC9Q9UKV0 1011 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 SUFUQ9UMX1 484 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 KRIT1O00522 736 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 SUN1O94901 812 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 ARHGEF12Q9NZN5 1544 aa13.42□□□□□ -0.26
COL12A1-202ENST00000345356 FOXO3O43524 673 aa13.41□□□□□ -0.26
COL12A1-202ENST00000345356 CCDC84Q86UT8 332 aaPredicted RBP13.41□□□□□ -0.26
COL12A1-202ENST00000345356 ABCC4O15439 1325 aa13.41□□□□□ -0.26
COL12A1-202ENST00000345356 TSPY3P0CV98 308 aa13.41□□□□□ -0.26
COL12A1-202ENST00000345356 TSPY8P0CW00 308 aa13.41□□□□□ -0.26
COL12A1-202ENST00000345356 TROVE2P10155 538 aaKnown RBP eCLIP13.41□□□□□ -0.26
COL12A1-202ENST00000345356 IFNAR2P48551 515 aa13.41□□□□□ -0.26
COL12A1-202ENST00000345356 MORC3Q14149 939 aa13.41□□□□□ -0.26
COL12A1-202ENST00000345356 PSMD6Q15008 389 aa13.41□□□□□ -0.26
COL12A1-202ENST00000345356 FAM133BQ5BKY9 247 aaKnown RBP13.41□□□□□ -0.26
COL12A1-202ENST00000345356 PIK3AP1Q6ZUJ8 805 aa13.41□□□□□ -0.26
COL12A1-202ENST00000345356 KLHL34Q8N239 644 aa13.41□□□□□ -0.26
COL12A1-202ENST00000345356 KLHL29Q96CT2 875 aa13.41□□□□□ -0.26
COL12A1-202ENST00000345356 TMEM87BQ96K49 555 aa13.41□□□□□ -0.26
COL12A1-202ENST00000345356 NUF2Q9BZD4 464 aa13.41□□□□□ -0.26
COL12A1-202ENST00000345356 ZPR1O75312 459 aa13.41□□□□□ -0.26
COL12A1-202ENST00000345356 TTC38Q5R3I4 469 aa13.41□□□□□ -0.26
COL12A1-202ENST00000345356 CXorf56Q9H5V9 222 aa13.41□□□□□ -0.26
COL12A1-202ENST00000345356 HS2ST1Q7LGA3 356 aa13.41□□□□□ -0.26
COL12A1-202ENST00000345356 USP37Q86T82 979 aa13.41□□□□□ -0.26
COL12A1-202ENST00000345356 TXNDC16Q9P2K2 825 aa13.41□□□□□ -0.26
COL12A1-202ENST00000345356 PARP2Q9UGN5 583 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms