RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 PSMC4P43686 418 aa17.49■□□□□ 0.39
HMGN3-202ENST00000344726 USP5P45974 858 aa17.49■□□□□ 0.39
HMGN3-202ENST00000344726 HMGCS2P54868 508 aa17.49■□□□□ 0.39
HMGN3-202ENST00000344726 EVX2Q03828 476 aa17.49■□□□□ 0.39
HMGN3-202ENST00000344726 TSHZ3Q63HK5 1081 aa17.49■□□□□ 0.39
HMGN3-202ENST00000344726 CERS3Q8IU89 383 aa17.49■□□□□ 0.39
HMGN3-202ENST00000344726 ZNF280CQ8ND82 737 aa17.49■□□□□ 0.39
HMGN3-202ENST00000344726 SH3TC2Q8TF17 1288 aa17.49■□□□□ 0.39
HMGN3-202ENST00000344726 SLC45A1Q9Y2W3 748 aa17.49■□□□□ 0.39
HMGN3-202ENST00000344726 USP17L5A8MUK1 530 aa17.48■□□□□ 0.39
HMGN3-202ENST00000344726 OSBPP22059 807 aa17.48■□□□□ 0.39
HMGN3-202ENST00000344726 ADD2P35612 726 aa17.48■□□□□ 0.39
HMGN3-202ENST00000344726 KIF22Q14807 665 aa17.48■□□□□ 0.39
HMGN3-202ENST00000344726 FOXP4Q8IVH2 680 aaPredicted RBP17.48■□□□□ 0.39
HMGN3-202ENST00000344726 ECHDC1Q9NTX5 307 aa17.48■□□□□ 0.39
HMGN3-202ENST00000344726 MYH8P13535 1937 aa17.48■□□□□ 0.39
HMGN3-202ENST00000344726 DOCK3Q8IZD9 2030 aa17.47■□□□□ 0.39
HMGN3-202ENST00000344726 PDE4DIPQ5VU43 2346 aa17.47■□□□□ 0.39
HMGN3-202ENST00000344726 SLC9C1Q4G0N8 1177 aa17.47■□□□□ 0.39
HMGN3-202ENST00000344726 SH3D19Q5HYK7 790 aa17.47■□□□□ 0.39
HMGN3-202ENST00000344726 LCORLQ8N3X6 602 aa17.47■□□□□ 0.39
HMGN3-202ENST00000344726 CRACR2BQ8N4Y2 399 aaPredicted RBP17.47■□□□□ 0.39
HMGN3-202ENST00000344726 PROCA1Q8NCQ7 364 aaPredicted RBP17.47■□□□□ 0.39
HMGN3-202ENST00000344726 SRRDQ9UH36 339 aa17.47■□□□□ 0.39
HMGN3-202ENST00000344726 KIAA0100Q14667 2235 aaKnown RBP17.47■□□□□ 0.39
HMGN3-202ENST00000344726 GNRH1P01148 92 aa17.46■□□□□ 0.39
HMGN3-202ENST00000344726 HLA-DOAP06340 250 aa17.46■□□□□ 0.39
HMGN3-202ENST00000344726 PLCD1P51178 756 aa17.46■□□□□ 0.39
HMGN3-202ENST00000344726 MTMR2Q13614 643 aa17.46■□□□□ 0.39
HMGN3-202ENST00000344726 ARHGEF6Q15052 776 aa17.46■□□□□ 0.39
HMGN3-202ENST00000344726 OTUD7AQ8TE49 926 aaPredicted RBP17.46■□□□□ 0.39
HMGN3-202ENST00000344726 SDR42E1Q8WUS8 393 aa17.46■□□□□ 0.39
HMGN3-202ENST00000344726 WDR18Q9BV38 432 aa17.46■□□□□ 0.39
HMGN3-202ENST00000344726 ARMT1Q9H993 441 aa17.46■□□□□ 0.39
HMGN3-202ENST00000344726 ZBTB21Q9ULJ3 1066 aa17.46■□□□□ 0.39
HMGN3-202ENST00000344726 GABRQQ9UN88 632 aa17.46■□□□□ 0.39
HMGN3-202ENST00000344726 FMNL1O95466 1100 aaPredicted RBP17.45■□□□□ 0.38
HMGN3-202ENST00000344726 MYCP01106 439 aaPredicted RBP17.45■□□□□ 0.38
HMGN3-202ENST00000344726 ASNSP08243 561 aa17.45■□□□□ 0.38
HMGN3-202ENST00000344726 EN2P19622 333 aaPredicted RBP17.45■□□□□ 0.38
HMGN3-202ENST00000344726 PRKCZQ05513 592 aa17.45■□□□□ 0.38
HMGN3-202ENST00000344726 TATDN1Q6P1N9 297 aa17.45■□□□□ 0.38
HMGN3-202ENST00000344726 TBC1D2Q9BYX2 928 aa17.45■□□□□ 0.38
HMGN3-202ENST00000344726 CRNKL1Q9BZJ0 848 aaKnown RBP17.45■□□□□ 0.38
HMGN3-202ENST00000344726 MYPNQ86TC9 1320 aa17.45■□□□□ 0.38
HMGN3-202ENST00000344726 PRKAB2O43741 272 aa17.44■□□□□ 0.38
HMGN3-202ENST00000344726 MBD4O95243 580 aa17.44■□□□□ 0.38
HMGN3-202ENST00000344726 BACE1P56817 501 aa17.44■□□□□ 0.38
HMGN3-202ENST00000344726 ANKRD13CQ8N6S4 541 aa17.44■□□□□ 0.38
HMGN3-202ENST00000344726 SMCR8Q8TEV9 937 aaPredicted RBP17.44■□□□□ 0.38
HMGN3-202ENST00000344726 TRIM34Q9BYJ4 488 aa17.44■□□□□ 0.38
HMGN3-202ENST00000344726 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.44■□□□□ 0.389e-10■■□□□ 12.3
HMGN3-202ENST00000344726 EHD4Q9H223 541 aa17.44■□□□□ 0.38
HMGN3-202ENST00000344726 AS3MTQ9HBK9 375 aa17.44■□□□□ 0.38
HMGN3-202ENST00000344726 DCP1AQ9NPI6 582 aaPredicted RBP17.44■□□□□ 0.38
HMGN3-202ENST00000344726 SERPINB13Q9UIV8 391 aa17.44■□□□□ 0.38
HMGN3-202ENST00000344726 PEX10O60683 326 aa17.43■□□□□ 0.38
HMGN3-202ENST00000344726 GH2P01242 217 aa17.43■□□□□ 0.38
HMGN3-202ENST00000344726 SHMT1P34896 483 aa17.43■□□□□ 0.38
HMGN3-202ENST00000344726 PRMT2P55345 433 aa17.43■□□□□ 0.38
HMGN3-202ENST00000344726 FCGRTP55899 365 aa17.43■□□□□ 0.38
HMGN3-202ENST00000344726 UBE3CQ15386 1083 aa17.43■□□□□ 0.38
HMGN3-202ENST00000344726 MTFR1Q15390 333 aa17.43■□□□□ 0.38
HMGN3-202ENST00000344726 ASCC2Q9H1I8 757 aaPredicted RBP17.43■□□□□ 0.38
HMGN3-202ENST00000344726 SMIM22K7EJ46 135 aa17.42■□□□□ 0.38
HMGN3-202ENST00000344726 CYP2D6P10635 497 aa17.42■□□□□ 0.38
HMGN3-202ENST00000344726 GABPAQ06546 454 aa17.42■□□□□ 0.38
HMGN3-202ENST00000344726 TTC6Q86TZ1 520 aa17.42■□□□□ 0.38
HMGN3-202ENST00000344726 PI4K2BQ8TCG2 481 aa17.42■□□□□ 0.38
HMGN3-202ENST00000344726 PUS7LQ9H0K6 701 aaKnown RBP17.42■□□□□ 0.38
HMGN3-202ENST00000344726 MCM9Q9NXL9 1143 aa17.42■□□□□ 0.38
HMGN3-202ENST00000344726 SALL3Q9BXA9 1300 aa17.42■□□□□ 0.38
HMGN3-202ENST00000344726 POLR3DP05423 398 aaPredicted RBP17.41■□□□□ 0.38
HMGN3-202ENST00000344726 GUCY1A2P33402 732 aa17.41■□□□□ 0.38
HMGN3-202ENST00000344726 HDAC1Q13547 482 aaPredicted RBP17.41■□□□□ 0.38
HMGN3-202ENST00000344726 FAM110CQ1W6H9 321 aa17.41■□□□□ 0.38
HMGN3-202ENST00000344726 POTEEQ6S8J3 1075 aa17.41■□□□□ 0.38
HMGN3-202ENST00000344726 NBPF11Q86T75 865 aa17.41■□□□□ 0.38
HMGN3-202ENST00000344726 KBTBD3Q8NAB2 608 aa17.41■□□□□ 0.38
HMGN3-202ENST00000344726 GPATCH3Q96I76 525 aa17.41■□□□□ 0.38
HMGN3-202ENST00000344726 EMILIN3Q9NT22 766 aa17.41■□□□□ 0.38
HMGN3-202ENST00000344726 GINM1Q9NU53 330 aa17.41■□□□□ 0.38
HMGN3-202ENST00000344726 PNMA3Q9UL41 463 aa17.41■□□□□ 0.38
HMGN3-202ENST00000344726 PLXNB2O15031 1838 aa17.4■□□□□ 0.38
HMGN3-202ENST00000344726 USP17L10C9JJH3 530 aa17.4■□□□□ 0.38
HMGN3-202ENST00000344726 GRK4P32298 578 aa17.4■□□□□ 0.38
HMGN3-202ENST00000344726 RAET1EQ8TD07 263 aa17.4■□□□□ 0.38
HMGN3-202ENST00000344726 TTC41PQ6P2S7 1318 aa17.4■□□□□ 0.38
HMGN3-202ENST00000344726 TNPO2O14787 897 aaKnown RBP17.39■□□□□ 0.37
HMGN3-202ENST00000344726 HOXD10P28358 340 aa17.39■□□□□ 0.37
HMGN3-202ENST00000344726 HOXA7P31268 230 aaPredicted RBP17.39■□□□□ 0.37
HMGN3-202ENST00000344726 FLT3LGP49771 235 aa17.39■□□□□ 0.37
HMGN3-202ENST00000344726 CERKLQ49MI3 558 aaPredicted RBP17.39■□□□□ 0.37
HMGN3-202ENST00000344726 ZSCAN25Q6NSZ9 544 aa17.39■□□□□ 0.37
HMGN3-202ENST00000344726 SLC44A5Q8NCS7 719 aa17.39■□□□□ 0.37
HMGN3-202ENST00000344726 EXOC6Q8TAG9 804 aa17.39■□□□□ 0.37
HMGN3-202ENST00000344726 ACER1Q8TDN7 264 aa17.39■□□□□ 0.37
HMGN3-202ENST00000344726 SHISA4Q96DD7 197 aa17.39■□□□□ 0.37
HMGN3-202ENST00000344726 TXNRD2Q9NNW7 524 aa17.39■□□□□ 0.37
HMGN3-202ENST00000344726 CYP2D7A0A087X1C5 515 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms