RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 IMPG2Q9BZV3 1241 aa18.55■□□□□ 0.56
SMARCA4-201ENST00000344626 CCDC17Q96LX7 622 aa18.55■□□□□ 0.56
SMARCA4-201ENST00000344626 SWAP70Q9UH65 585 aa18.55■□□□□ 0.56
SMARCA4-201ENST00000344626 NEXMIFQ5QGS0 1516 aa18.55■□□□□ 0.56
SMARCA4-201ENST00000344626 EP400NLQ6ZTU2 488 aa18.55■□□□□ 0.56
SMARCA4-201ENST00000344626 DHX58Q96C10 678 aa18.55■□□□□ 0.56
SMARCA4-201ENST00000344626 MMRN2Q9H8L6 949 aa18.55■□□□□ 0.56
SMARCA4-201ENST00000344626 ZNRF3Q9ULT6 936 aa18.55■□□□□ 0.56
SMARCA4-201ENST00000344626 MYO3BQ8WXR4 1341 aa18.55■□□□□ 0.56
SMARCA4-201ENST00000344626 PLCD1P51178 756 aa18.55■□□□□ 0.56
SMARCA4-201ENST00000344626 SP8Q8IXZ3 490 aa18.55■□□□□ 0.56
SMARCA4-201ENST00000344626 IQUBQ8NA54 791 aa18.55■□□□□ 0.56
SMARCA4-201ENST00000344626 CTAGE1Q96RT6 745 aa18.55■□□□□ 0.56
SMARCA4-201ENST00000344626 IGKV5-2P06315 115 aa18.54■□□□□ 0.56
SMARCA4-201ENST00000344626 PUF60Q9UHX1 559 aaKnown RBP18.54■□□□□ 0.56
SMARCA4-201ENST00000344626 FRMPD2Q68DX3 1309 aaPredicted RBP18.54■□□□□ 0.56
SMARCA4-201ENST00000344626 FAM177A1Q8N128 213 aaPredicted RBP18.54■□□□□ 0.56
SMARCA4-201ENST00000344626 DIP2AQ14689 1571 aa18.54■□□□□ 0.56
SMARCA4-201ENST00000344626 TESPA1A2RU30 521 aaPredicted RBP18.54■□□□□ 0.56
SMARCA4-201ENST00000344626 ANKRD62A6NC57 917 aa18.54■□□□□ 0.56
SMARCA4-201ENST00000344626 WRNIP1Q96S55 665 aa18.54■□□□□ 0.56
SMARCA4-201ENST00000344626 PI4KBQ9UBF8 816 aa18.54■□□□□ 0.56
SMARCA4-201ENST00000344626 CNPY2Q9Y2B0 182 aa18.54■□□□□ 0.56
SMARCA4-201ENST00000344626 E7EWF7 191 aa18.53■□□□□ 0.56
SMARCA4-201ENST00000344626 TBC1D5Q92609 795 aa18.53■□□□□ 0.56
SMARCA4-201ENST00000344626 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.53■□□□□ 0.56
SMARCA4-201ENST00000344626 CNOT7Q9UIV1 285 aaKnown RBP18.53■□□□□ 0.56
SMARCA4-201ENST00000344626 PTPN12Q05209 780 aaKnown RBP18.53■□□□□ 0.56
SMARCA4-201ENST00000344626 NONOQ15233 471 aaKnown RBP eCLIP18.53■□□□□ 0.569e-8■■■■□ 21.6
SMARCA4-201ENST00000344626 MLXIPQ9HAP2 919 aa18.53■□□□□ 0.56
SMARCA4-201ENST00000344626 KIF4AO95239 1232 aa18.53■□□□□ 0.56
SMARCA4-201ENST00000344626 CRKP46108 304 aa18.53■□□□□ 0.56
SMARCA4-201ENST00000344626 ZNF165P49910 485 aa18.53■□□□□ 0.56
SMARCA4-201ENST00000344626 GPSM2P81274 684 aa18.53■□□□□ 0.56
SMARCA4-201ENST00000344626 HARSP12081 509 aaKnown RBP18.52■□□□□ 0.56
SMARCA4-201ENST00000344626 DHX36Q9H2U1 1008 aaKnown RBP18.52■□□□□ 0.56
SMARCA4-201ENST00000344626 ZSCAN10Q96SZ4 725 aaPredicted RBP18.52■□□□□ 0.56
SMARCA4-201ENST00000344626 HACL1Q9UJ83 578 aa18.52■□□□□ 0.56
SMARCA4-201ENST00000344626 BICDL2A1A5D9 508 aa18.52■□□□□ 0.56
SMARCA4-201ENST00000344626 MICALL2Q8IY33 904 aa18.52■□□□□ 0.56
SMARCA4-201ENST00000344626 CPS1P31327 1500 aa18.52■□□□□ 0.55
SMARCA4-201ENST00000344626 GOLGA8HP0CJ92 632 aa18.52■□□□□ 0.55
SMARCA4-201ENST00000344626 DNM1Q05193 864 aaKnown RBP18.52■□□□□ 0.55
SMARCA4-201ENST00000344626 PLIN2Q99541 437 aa18.52■□□□□ 0.55
SMARCA4-201ENST00000344626 NBPF3Q9H094 633 aa18.52■□□□□ 0.55
SMARCA4-201ENST00000344626 ZBTB12Q9Y330 459 aaPredicted RBP18.52■□□□□ 0.55
SMARCA4-201ENST00000344626 KIF2AO00139 706 aaPredicted RBP18.51■□□□□ 0.55
SMARCA4-201ENST00000344626 USP14P54578 494 aa18.51■□□□□ 0.55
SMARCA4-201ENST00000344626 KIF4BQ2VIQ3 1234 aa18.51■□□□□ 0.55
SMARCA4-201ENST00000344626 TLR7Q9NYK1 1049 aaKnown RBP18.51■□□□□ 0.55
SMARCA4-201ENST00000344626 PLEKHG2Q9H7P9 1386 aa18.51■□□□□ 0.55
SMARCA4-201ENST00000344626 N4BP3O15049 544 aa18.51■□□□□ 0.55
SMARCA4-201ENST00000344626 SORBS3O60504 671 aa18.51■□□□□ 0.55
SMARCA4-201ENST00000344626 GSDMDP57764 484 aa18.51■□□□□ 0.55
SMARCA4-201ENST00000344626 RASGRF1Q13972 1273 aa18.51■□□□□ 0.55
SMARCA4-201ENST00000344626 TAF12Q16514 161 aa18.51■□□□□ 0.55
SMARCA4-201ENST00000344626 SV2BQ7L1I2 683 aa18.51■□□□□ 0.55
SMARCA4-201ENST00000344626 TM6SF1Q9BZW5 370 aa18.51■□□□□ 0.55
SMARCA4-201ENST00000344626 PRKAG2Q9UGJ0 569 aa18.51■□□□□ 0.55
SMARCA4-201ENST00000344626 CCDC65Q8IXS2 484 aa18.51■□□□□ 0.55
SMARCA4-201ENST00000344626 PNMA1Q8ND90 353 aa18.51■□□□□ 0.55
SMARCA4-201ENST00000344626 ARHGEF16Q5VV41 709 aa18.51■□□□□ 0.55
SMARCA4-201ENST00000344626 PIK3AP1Q6ZUJ8 805 aa18.51■□□□□ 0.55
SMARCA4-201ENST00000344626 ANTXR1Q9H6X2 564 aa18.51■□□□□ 0.55
SMARCA4-201ENST00000344626 CCPG1Q9ULG6 757 aa18.51■□□□□ 0.55
SMARCA4-201ENST00000344626 M0QZ92 97 aa18.5■□□□□ 0.55
SMARCA4-201ENST00000344626 ZNF174Q15697 407 aa18.5■□□□□ 0.55
SMARCA4-201ENST00000344626 ISM2Q6H9L7 571 aa18.5■□□□□ 0.55
SMARCA4-201ENST00000344626 NEMFO60524 1076 aa18.5■□□□□ 0.55
SMARCA4-201ENST00000344626 CCNT1O60563 726 aaKnown RBP18.5■□□□□ 0.55
SMARCA4-201ENST00000344626 CCT6AP40227 531 aaKnown RBP18.5■□□□□ 0.55
SMARCA4-201ENST00000344626 PPM1FP49593 454 aaPredicted RBP18.5■□□□□ 0.55
SMARCA4-201ENST00000344626 KLHL40Q2TBA0 621 aa18.5■□□□□ 0.55
SMARCA4-201ENST00000344626 GNPTABQ3T906 1256 aa18.5■□□□□ 0.55
SMARCA4-201ENST00000344626 NLRX1Q86UT6 975 aa18.5■□□□□ 0.55
SMARCA4-201ENST00000344626 PLCD3Q8N3E9 789 aa18.5■□□□□ 0.55
SMARCA4-201ENST00000344626 NCOA5Q9HCD5 579 aaKnown RBP18.5■□□□□ 0.55
SMARCA4-201ENST00000344626 PRDX5P30044 214 aa18.5■□□□□ 0.55
SMARCA4-201ENST00000344626 ZHX2Q9Y6X8 837 aa18.5■□□□□ 0.55
SMARCA4-201ENST00000344626 HSPA4P34932 840 aa18.5■□□□□ 0.55
SMARCA4-201ENST00000344626 PPP1R2P41236 205 aa18.5■□□□□ 0.55
SMARCA4-201ENST00000344626 SMTNP53814 917 aa18.5■□□□□ 0.55
SMARCA4-201ENST00000344626 C9orf131Q5VYM1 1079 aa18.5■□□□□ 0.55
SMARCA4-201ENST00000344626 MRPL11Q9Y3B7 192 aaKnown RBP18.5■□□□□ 0.55
SMARCA4-201ENST00000344626 EPHA10Q5JZY3 1008 aa18.5■□□□□ 0.55
SMARCA4-201ENST00000344626 KIF5CO60282 957 aa18.49■□□□□ 0.55
SMARCA4-201ENST00000344626 CAMTA2O94983 1202 aa18.49■□□□□ 0.55
SMARCA4-201ENST00000344626 ARID4AP29374 1257 aaPredicted RBP18.49■□□□□ 0.55
SMARCA4-201ENST00000344626 MECOMQ03112 1051 aa18.49■□□□□ 0.55
SMARCA4-201ENST00000344626 SPOUT1Q5T280 376 aaKnown RBP18.49■□□□□ 0.55
SMARCA4-201ENST00000344626 CCDC112Q8NEF3 446 aa18.49■□□□□ 0.55
SMARCA4-201ENST00000344626 CPLX3Q8WVH0 158 aa18.49■□□□□ 0.55
SMARCA4-201ENST00000344626 MCF2L2Q86YR7 1114 aa18.49■□□□□ 0.55
SMARCA4-201ENST00000344626 POTEAQ6S8J7 498 aa18.49■□□□□ 0.55
SMARCA4-201ENST00000344626 OTUD5Q96G74 571 aa18.49■□□□□ 0.55
SMARCA4-201ENST00000344626 CRAMP1Q96RY5 1269 aa18.49■□□□□ 0.55
SMARCA4-201ENST00000344626 ISCA1Q9BUE6 129 aa18.49■□□□□ 0.55
SMARCA4-201ENST00000344626 HSPD1P10809 573 aaKnown RBP18.49■□□□□ 0.55
SMARCA4-201ENST00000344626 USP42Q9H9J4 1324 aaKnown RBP18.48■□□□□ 0.55
SMARCA4-201ENST00000344626 TMED8Q6PL24 325 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms