RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ZNF277Q9NRM2 450 aaPredicted RBP15.83■□□□□ 0.13
CDC42-202ENST00000344548 USP40Q9NVE5 1235 aa15.83■□□□□ 0.13
CDC42-202ENST00000344548 PLEKHA8P1O95397 391 aa15.83■□□□□ 0.12
CDC42-202ENST00000344548 IFNAR1P17181 557 aa15.83■□□□□ 0.12
CDC42-202ENST00000344548 CRKP46108 304 aa15.83■□□□□ 0.12
CDC42-202ENST00000344548 SYNE3Q6ZMZ3 975 aa15.83■□□□□ 0.12
CDC42-202ENST00000344548 SLF2Q8IX21 1173 aa15.83■□□□□ 0.12
CDC42-202ENST00000344548 SHISA4Q96DD7 197 aa15.83■□□□□ 0.12
CDC42-202ENST00000344548 MYH1P12882 1939 aa15.82■□□□□ 0.12
CDC42-202ENST00000344548 SLC3A2P08195 630 aaKnown RBP15.82■□□□□ 0.12
CDC42-202ENST00000344548 CDK8P49336 464 aa15.82■□□□□ 0.12
CDC42-202ENST00000344548 CCDC125Q86Z20 511 aa15.82■□□□□ 0.12
CDC42-202ENST00000344548 LEO1Q8WVC0 666 aaPredicted RBP15.82■□□□□ 0.12
CDC42-202ENST00000344548 USP28Q96RU2 1077 aa15.82■□□□□ 0.12
CDC42-202ENST00000344548 MKNK2Q9HBH9 465 aa15.82■□□□□ 0.12
CDC42-202ENST00000344548 PLCG2P16885 1265 aa15.82■□□□□ 0.12
CDC42-202ENST00000344548 FUT2Q10981 343 aa15.82■□□□□ 0.12
CDC42-202ENST00000344548 HHIPL2Q6UWX4 724 aa15.82■□□□□ 0.12
CDC42-202ENST00000344548 RASGRP2Q7LDG7 609 aa15.82■□□□□ 0.12
CDC42-202ENST00000344548 CRACR2BQ8N4Y2 399 aaPredicted RBP15.82■□□□□ 0.12
CDC42-202ENST00000344548 TEKT1Q969V4 418 aa15.82■□□□□ 0.12
CDC42-202ENST00000344548 ZSCAN16Q9H4T2 348 aaPredicted RBP15.82■□□□□ 0.12
CDC42-202ENST00000344548 KIF3AQ9Y496 699 aa15.82■□□□□ 0.12
CDC42-202ENST00000344548 FOCADQ5VW36 1801 aa15.81■□□□□ 0.12
CDC42-202ENST00000344548 KIF13BQ9NQT8 1826 aa15.81■□□□□ 0.12
CDC42-202ENST00000344548 BAZ2BQ9UIF8 2168 aaKnown RBP15.81■□□□□ 0.12
CDC42-202ENST00000344548 FMNL1O95466 1100 aaPredicted RBP15.81■□□□□ 0.12
CDC42-202ENST00000344548 KRT40Q6A162 431 aa15.81■□□□□ 0.12
CDC42-202ENST00000344548 CC2D2BQ6DHV5 1058 aa15.81■□□□□ 0.12
CDC42-202ENST00000344548 C16orf86Q6ZW13 317 aa15.81■□□□□ 0.12
CDC42-202ENST00000344548 PGBD1Q96JS3 809 aa15.81■□□□□ 0.12
CDC42-202ENST00000344548 PSDA5PKW4 1024 aaPredicted RBP15.8■□□□□ 0.12
CDC42-202ENST00000344548 UBE2HP62256 183 aa15.8■□□□□ 0.12
CDC42-202ENST00000344548 CCDC93Q567U6 631 aa15.8■□□□□ 0.12
CDC42-202ENST00000344548 PPP1R1BQ9UD71 204 aaPredicted RBP15.8■□□□□ 0.12
CDC42-202ENST00000344548 CDKL5O76039 1030 aa15.8■□□□□ 0.12
CDC42-202ENST00000344548 MBD3O95983 291 aa15.8■□□□□ 0.12
CDC42-202ENST00000344548 KIF23Q02241 960 aaPredicted RBP15.8■□□□□ 0.12
CDC42-202ENST00000344548 SSRP1Q08945 709 aaKnown RBP15.8■□□□□ 0.12
CDC42-202ENST00000344548 RAD17O75943 681 aa15.79■□□□□ 0.12
CDC42-202ENST00000344548 VEGFAP15692 232 aaPredicted RBP15.79■□□□□ 0.12
CDC42-202ENST00000344548 CPLX2Q6PUV4 134 aaKnown RBP15.79■□□□□ 0.12
CDC42-202ENST00000344548 CATIPQ7Z7H3 387 aa15.79■□□□□ 0.12
CDC42-202ENST00000344548 CERS3Q8IU89 383 aa15.79■□□□□ 0.12
CDC42-202ENST00000344548 SPATA32Q96LK8 384 aa15.79■□□□□ 0.12
CDC42-202ENST00000344548 ZDHHC15Q96MV8 337 aa15.79■□□□□ 0.12
CDC42-202ENST00000344548 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.79■□□□□ 0.12
CDC42-202ENST00000344548 MTFR1LQ9H019 292 aa15.79■□□□□ 0.12
CDC42-202ENST00000344548 KCNJ14Q9UNX9 436 aa15.79■□□□□ 0.12
CDC42-202ENST00000344548 SYCE3A1L190 88 aa15.79■□□□□ 0.12
CDC42-202ENST00000344548 TSPY3P0CV98 308 aa15.79■□□□□ 0.12
CDC42-202ENST00000344548 TSPY8P0CW00 308 aa15.79■□□□□ 0.12
CDC42-202ENST00000344548 GABPAQ06546 454 aa15.79■□□□□ 0.12
CDC42-202ENST00000344548 PKN1Q16512 942 aa15.79■□□□□ 0.12
CDC42-202ENST00000344548 ZNF444Q8N0Y2 327 aaPredicted RBP15.79■□□□□ 0.12
CDC42-202ENST00000344548 SRBD1Q8N5C6 995 aaKnown RBP15.79■□□□□ 0.12
CDC42-202ENST00000344548 SGIP1Q9BQI5 828 aa15.79■□□□□ 0.12
CDC42-202ENST00000344548 MYH15Q9Y2K3 1946 aa15.79■□□□□ 0.12
CDC42-202ENST00000344548 LIG1P18858 919 aa15.78■□□□□ 0.12
CDC42-202ENST00000344548 RBM5P52756 815 aaKnown RBP eCLIP15.78■□□□□ 0.12
CDC42-202ENST00000344548 RCAN1P53805 252 aa15.78■□□□□ 0.12
CDC42-202ENST00000344548 TCP10Q12799 353 aa15.78■□□□□ 0.12
CDC42-202ENST00000344548 AMOTL1Q8IY63 956 aa15.78■□□□□ 0.12
CDC42-202ENST00000344548 ZBTB12Q9Y330 459 aaPredicted RBP15.78■□□□□ 0.12
CDC42-202ENST00000344548 STK36Q9NRP7 1315 aa15.78■□□□□ 0.12
CDC42-202ENST00000344548 CLEC10AQ8IUN9 316 aa15.78■□□□□ 0.12
CDC42-202ENST00000344548 RTKN2Q8IZC4 609 aa15.78■□□□□ 0.12
CDC42-202ENST00000344548 STAG2Q8N3U4 1231 aa15.78■□□□□ 0.12
CDC42-202ENST00000344548 PSMD1Q99460 953 aa15.78■□□□□ 0.12
CDC42-202ENST00000344548 OSBPL5Q9H0X9 879 aaPredicted RBP15.78■□□□□ 0.12
CDC42-202ENST00000344548 FAM198AQ9UFP1 575 aa15.78■□□□□ 0.12
CDC42-202ENST00000344548 MTMR7Q9Y216 660 aa15.78■□□□□ 0.12
CDC42-202ENST00000344548 ELP1O95163 1332 aa15.77■□□□□ 0.12
CDC42-202ENST00000344548 GOLGA6L3A6NEY3 463 aa15.77■□□□□ 0.12
CDC42-202ENST00000344548 FAM196BA6NMK8 535 aa15.77■□□□□ 0.12
CDC42-202ENST00000344548 XRCC6P12956 609 aaKnown RBP eCLIP15.77■□□□□ 0.123e-11■□□□□ 9.2
CDC42-202ENST00000344548 ZNF445P59923 1031 aa15.77■□□□□ 0.12
CDC42-202ENST00000344548 FKBP1AP62942 108 aaKnown RBP15.77■□□□□ 0.12
CDC42-202ENST00000344548 SLC35G1Q2M3R5 365 aa15.77■□□□□ 0.12
CDC42-202ENST00000344548 SH3BP5LQ7L8J4 393 aa15.77■□□□□ 0.12
CDC42-202ENST00000344548 KLHL34Q8N239 644 aa15.77■□□□□ 0.12
CDC42-202ENST00000344548 LARGE2Q8N3Y3 721 aa15.77■□□□□ 0.12
CDC42-202ENST00000344548 SUPT20HQ8NEM7 779 aa15.77■□□□□ 0.12
CDC42-202ENST00000344548 UPF1Q92900 1129 aaKnown RBP eCLIP15.77■□□□□ 0.122e-12■■■■■ 27.7
CDC42-202ENST00000344548 PRMT6Q96LA8 375 aaPredicted RBP15.77■□□□□ 0.12
CDC42-202ENST00000344548 SCAND2PQ9GZW5 306 aaPredicted RBP15.77■□□□□ 0.12
CDC42-202ENST00000344548 PIM2Q9P1W9 311 aa15.77■□□□□ 0.12
CDC42-202ENST00000344548 STX8Q9UNK0 236 aa15.77■□□□□ 0.12
CDC42-202ENST00000344548 CLIC4Q9Y696 253 aa15.77■□□□□ 0.12
CDC42-202ENST00000344548 V9GY48 417 aaPredicted RBP15.77■□□□□ 0.12
CDC42-202ENST00000344548 PSMD14O00487 310 aa15.77■□□□□ 0.11
CDC42-202ENST00000344548 SHROOM1Q2M3G4 852 aaPredicted RBP15.77■□□□□ 0.11
CDC42-202ENST00000344548 TMTC3Q6ZXV5 915 aa15.77■□□□□ 0.11
CDC42-202ENST00000344548 DGKHQ86XP1 1220 aa15.77■□□□□ 0.11
CDC42-202ENST00000344548 TMEM47Q9BQJ4 181 aa15.77■□□□□ 0.11
CDC42-202ENST00000344548 PANK2Q9BZ23 570 aa15.77■□□□□ 0.11
CDC42-202ENST00000344548 TDRD3Q9H7E2 651 aaKnown RBP15.77■□□□□ 0.11
CDC42-202ENST00000344548 CCDC196A0A1B0GTZ2 297 aa15.76■□□□□ 0.11
CDC42-202ENST00000344548 DDTLA6NHG4 134 aaPredicted RBP15.76■□□□□ 0.11
CDC42-202ENST00000344548 DDAH1O94760 285 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms