RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 SUDS3Q9H7L9 328 aaPredicted RBP13.63□□□□□ -0.23
TRIOBP-202ENST00000344404 MTUS1Q9ULD2 1270 aa13.63□□□□□ -0.23
TRIOBP-202ENST00000344404 DCUN1D2Q6PH85 259 aa13.63□□□□□ -0.23
TRIOBP-202ENST00000344404 CDAN1Q8IWY9 1227 aa13.63□□□□□ -0.23
TRIOBP-202ENST00000344404 NELFCDQ8IXH7 590 aa13.63□□□□□ -0.23
TRIOBP-202ENST00000344404 ITM2BQ9Y287 266 aa13.63□□□□□ -0.23
TRIOBP-202ENST00000344404 NCAPD3P42695 1498 aa13.63□□□□□ -0.23
TRIOBP-202ENST00000344404 RNF113AO15541 343 aaKnown RBP13.63□□□□□ -0.23
TRIOBP-202ENST00000344404 ZBTB7AO95365 584 aa13.63□□□□□ -0.23
TRIOBP-202ENST00000344404 CALCOCO2Q13137 446 aa13.63□□□□□ -0.23
TRIOBP-202ENST00000344404 RNF217Q8TC41 542 aa13.63□□□□□ -0.23
TRIOBP-202ENST00000344404 ARHGEF2Q92974 986 aaKnown RBP13.63□□□□□ -0.23
TRIOBP-202ENST00000344404 SAMD15Q9P1V8 674 aa13.63□□□□□ -0.23
TRIOBP-202ENST00000344404 EEPD1Q7L9B9 569 aa13.63□□□□□ -0.23
TRIOBP-202ENST00000344404 MYL10Q9BUA6 226 aa13.63□□□□□ -0.23
TRIOBP-202ENST00000344404 TNNI1P19237 187 aa13.63□□□□□ -0.23
TRIOBP-202ENST00000344404 SLC1A4P43007 532 aa13.63□□□□□ -0.23
TRIOBP-202ENST00000344404 ERCC6LQ2NKX8 1250 aa13.63□□□□□ -0.23
TRIOBP-202ENST00000344404 SFMBT1Q9UHJ3 866 aa13.63□□□□□ -0.23
TRIOBP-202ENST00000344404 CASQ2O14958 399 aaPredicted RBP13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 RAD17O75943 681 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 PPP2R5AQ15172 486 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 FAM102BQ5T8I3 360 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 TPH2Q8IWU9 490 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 ABCC1P33527 1531 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 ARHGAP44Q17R89 818 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 CCDC186Q7Z3E2 898 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 SUPT20HQ8NEM7 779 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 CD2APQ9Y5K6 639 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 A0A1B0GVL5 298 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 NXNQ6DKJ4 435 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 PSPC1Q8WXF1 523 aaKnown RBP13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 ZBED2Q9BTP6 218 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 MRPL44Q9H9J2 332 aaKnown RBP13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 EFCAB5A4FU69 1503 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 KRT86O43790 486 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 NEDD9Q14511 834 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 POMGNT1Q8WZA1 660 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 IFNKQ9P0W0 207 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 GNAT2P19087 354 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 HOXC9P31274 260 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 CASP2P42575 452 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 ANKRD35Q8N283 1001 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 PPP1R12CQ9BZL4 782 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 DISP3Q9P2K9 1392 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 AFAP1L2Q8N4X5 818 aa13.62□□□□□ -0.23
TRIOBP-202ENST00000344404 OLA1Q9NTK5 396 aaKnown RBP13.61□□□□□ -0.23
TRIOBP-202ENST00000344404 TIAM1Q13009 1591 aa13.61□□□□□ -0.23
TRIOBP-202ENST00000344404 SUGCTQ9HAC7 445 aa13.61□□□□□ -0.23
TRIOBP-202ENST00000344404 NEMFO60524 1076 aa13.61□□□□□ -0.23
TRIOBP-202ENST00000344404 BAG1Q99933 345 aaPredicted RBP13.61□□□□□ -0.23
TRIOBP-202ENST00000344404 GRIN2AQ12879 1464 aa13.61□□□□□ -0.23
TRIOBP-202ENST00000344404 RPS6KA2Q15349 733 aa13.61□□□□□ -0.23
TRIOBP-202ENST00000344404 PRR16Q569H4 304 aa13.61□□□□□ -0.23
TRIOBP-202ENST00000344404 ARFGAP3Q9NP61 516 aa13.61□□□□□ -0.23
TRIOBP-202ENST00000344404 NKIRAS1Q9NYS0 192 aa13.61□□□□□ -0.23
TRIOBP-202ENST00000344404 CAPN9O14815 690 aa13.61□□□□□ -0.23
TRIOBP-202ENST00000344404 SPICE1Q8N0Z3 855 aa13.61□□□□□ -0.23
TRIOBP-202ENST00000344404 DCAF5Q96JK2 942 aa13.61□□□□□ -0.23
TRIOBP-202ENST00000344404 DBNDD1Q9H9R9 158 aa13.61□□□□□ -0.23
TRIOBP-202ENST00000344404 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.61□□□□□ -0.23
TRIOBP-202ENST00000344404 ABI1Q8IZP0 508 aa13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 CMTR1Q8N1G2 835 aaKnown RBP13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 LGR6Q9HBX8 967 aa13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 SLC12A2P55011 1212 aa13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 KRT83P78385 493 aa13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 CDR2Q01850 454 aa13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 LRFN2Q9ULH4 789 aa13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 PALM3A6NDB9 673 aaPredicted RBP13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 BMP15O95972 392 aa13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 RPL13P26373 211 aaKnown RBP13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 SLC5A4Q9NY91 659 aa13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 CAPN12Q6ZSI9 719 aa13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 GPR161Q8N6U8 529 aaKnown RBP13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 CALUO43852 315 aaPredicted RBP13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 ASIC2Q16515 512 aa13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 DNAJC10Q8IXB1 793 aa13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 ZMYM3Q14202 1370 aa13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 A0A1B0GUL7 405 aa13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 LIN9Q5TKA1 542 aa13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 FYB2Q5VWT5 728 aa13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 MGARPQ8TDB4 240 aa13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 RABGAP1Q9Y3P9 1069 aa13.6□□□□□ -0.23
TRIOBP-202ENST00000344404 MIGA2Q7L4E1 593 aa13.59□□□□□ -0.23
TRIOBP-202ENST00000344404 LRRC47Q8N1G4 583 aaKnown RBP13.59□□□□□ -0.23
TRIOBP-202ENST00000344404 EYA1Q99502 592 aa13.59□□□□□ -0.23
TRIOBP-202ENST00000344404 ZNF653Q96CK0 615 aa13.59□□□□□ -0.23
TRIOBP-202ENST00000344404 WDR66Q8TBY9 1149 aa13.59□□□□□ -0.23
TRIOBP-202ENST00000344404 GANCQ8TET4 914 aa13.59□□□□□ -0.23
TRIOBP-202ENST00000344404 V9GY48 417 aaPredicted RBP13.59□□□□□ -0.23
TRIOBP-202ENST00000344404 NR1I2O75469 434 aa13.59□□□□□ -0.23
TRIOBP-202ENST00000344404 CAPN2P17655 700 aa13.59□□□□□ -0.23
TRIOBP-202ENST00000344404 MFSD14BQ5SR56 506 aa13.59□□□□□ -0.23
TRIOBP-202ENST00000344404 RNASELQ05823 741 aaKnown RBP13.59□□□□□ -0.23
TRIOBP-202ENST00000344404 RILPQ96NA2 401 aa13.59□□□□□ -0.23
TRIOBP-202ENST00000344404 CCDC171Q6TFL3 1326 aa13.59□□□□□ -0.23
TRIOBP-202ENST00000344404 IGSF3O75054 1194 aa13.59□□□□□ -0.23
TRIOBP-202ENST00000344404 STAMQ92783 540 aa13.59□□□□□ -0.23
TRIOBP-202ENST00000344404 PDE8AO60658 829 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms