RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 FLIIQ13045 1269 aa8.84□□□□□ -0.99
ZNF540-202ENST00000343599 TKFCQ3LXA3 575 aa8.84□□□□□ -0.99
ZNF540-202ENST00000343599 RPLP2P05387 115 aaKnown RBP8.84□□□□□ -0.99
ZNF540-202ENST00000343599 RASA3Q14644 834 aa8.84□□□□□ -0.99
ZNF540-202ENST00000343599 USP17L2Q6R6M4 530 aa8.84□□□□□ -0.99
ZNF540-202ENST00000343599 ANKRD33Q7Z3H0 272 aa8.84□□□□□ -0.99
ZNF540-202ENST00000343599 RRP7AQ9Y3A4 280 aaKnown RBP8.84□□□□□ -0.99
ZNF540-202ENST00000343599 PTCH2Q9Y6C5 1203 aa8.84□□□□□ -0.99
ZNF540-202ENST00000343599 CABYRO75952 493 aa8.83□□□□□ -1
ZNF540-202ENST00000343599 CD99L2Q8TCZ2 262 aa8.83□□□□□ -1
ZNF540-202ENST00000343599 MYD88Q99836 296 aa8.83□□□□□ -1
ZNF540-202ENST00000343599 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.83□□□□□ -1
ZNF540-202ENST00000343599 GREM2Q9H772 168 aa8.83□□□□□ -1
ZNF540-202ENST00000343599 C1RP00736 705 aa8.83□□□□□ -1
ZNF540-202ENST00000343599 GPTP24298 496 aa8.83□□□□□ -1
ZNF540-202ENST00000343599 RGS2P41220 211 aa8.83□□□□□ -1
ZNF540-202ENST00000343599 CCNA1P78396 465 aa8.83□□□□□ -1
ZNF540-202ENST00000343599 NBPF9Q3BBW0 867 aa8.83□□□□□ -1
ZNF540-202ENST00000343599 ATF7IPQ6VMQ6 1270 aa8.83□□□□□ -1
ZNF540-202ENST00000343599 ZSCAN30Q86W11 494 aa8.83□□□□□ -1
ZNF540-202ENST00000343599 SLC43A3Q8NBI5 491 aa8.83□□□□□ -1
ZNF540-202ENST00000343599 MORC4Q8TE76 937 aa8.83□□□□□ -1
ZNF540-202ENST00000343599 PRDM6Q9NQX0 595 aa8.83□□□□□ -1
ZNF540-202ENST00000343599 MYL6BP14649 208 aa8.82□□□□□ -1
ZNF540-202ENST00000343599 LPAR1Q92633 364 aa8.82□□□□□ -1
ZNF540-202ENST00000343599 TRAIPQ9BWF2 469 aa8.82□□□□□ -1
ZNF540-202ENST00000343599 UBE2Q2LH0YL09 131 aa8.82□□□□□ -1
ZNF540-202ENST00000343599 SLC25A27O95847 323 aa8.82□□□□□ -1
ZNF540-202ENST00000343599 GIMAP6Q6P9H5 292 aa8.82□□□□□ -1
ZNF540-202ENST00000343599 ZIC5Q96T25 663 aa8.82□□□□□ -1
ZNF540-202ENST00000343599 NBPF3Q9H094 633 aa8.82□□□□□ -1
ZNF540-202ENST00000343599 MROH8Q9H579 483 aa8.82□□□□□ -1
ZNF540-202ENST00000343599 MTMR10Q9NXD2 777 aa8.82□□□□□ -1
ZNF540-202ENST00000343599 TBC1D8O95759 1140 aa8.81□□□□□ -1
ZNF540-202ENST00000343599 GRB14Q14449 540 aa8.81□□□□□ -1
ZNF540-202ENST00000343599 MVPQ14764 893 aaKnown RBP8.81□□□□□ -1
ZNF540-202ENST00000343599 CCDC57Q2TAC2 916 aa8.81□□□□□ -1
ZNF540-202ENST00000343599 MAMDC4Q6UXC1 1216 aa8.81□□□□□ -1
ZNF540-202ENST00000343599 PHOSPHO2Q8TCD6 241 aa8.81□□□□□ -1
ZNF540-202ENST00000343599 FAM89AQ96GI7 184 aa8.81□□□□□ -1
ZNF540-202ENST00000343599 PPP1R9BQ96SB3 815 aa8.81□□□□□ -1
ZNF540-202ENST00000343599 KIAA1683Q9H0B3 1180 aa8.81□□□□□ -1
ZNF540-202ENST00000343599 SWAP70Q9UH65 585 aa8.81□□□□□ -1
ZNF540-202ENST00000343599 KMT2EQ8IZD2 1858 aa8.81□□□□□ -1
ZNF540-202ENST00000343599 MOXD2PA6NHM9 499 aa8.81□□□□□ -1
ZNF540-202ENST00000343599 PTPRAP18433 802 aa8.81□□□□□ -1
ZNF540-202ENST00000343599 FOXK2Q01167 660 aa8.81□□□□□ -1
ZNF540-202ENST00000343599 TWISTNBQ3B726 338 aaPredicted RBP8.81□□□□□ -1
ZNF540-202ENST00000343599 ANKRD44Q8N8A2 993 aa8.81□□□□□ -1
ZNF540-202ENST00000343599 POM121Q96HA1 1249 aa8.81□□□□□ -1
ZNF540-202ENST00000343599 SAMD11Q96NU1 681 aa8.81□□□□□ -1
ZNF540-202ENST00000343599 ZNFX1Q9P2E3 1918 aaKnown RBP8.8□□□□□ -1
ZNF540-202ENST00000343599 UQCRHLA0A096LP55 91 aa8.8□□□□□ -1
ZNF540-202ENST00000343599 POTEFA5A3E0 1075 aa8.8□□□□□ -1
ZNF540-202ENST00000343599 EYA2O00167 538 aa8.8□□□□□ -1
ZNF540-202ENST00000343599 UQCRHP07919 91 aa8.8□□□□□ -1
ZNF540-202ENST00000343599 OLFM4Q6UX06 510 aa8.8□□□□□ -1
ZNF540-202ENST00000343599 ARRDC4Q8NCT1 418 aa8.8□□□□□ -1
ZNF540-202ENST00000343599 ELP1O95163 1332 aa8.8□□□□□ -1
ZNF540-202ENST00000343599 TRAK2O60296 914 aa8.8□□□□□ -1
ZNF540-202ENST00000343599 KPNA6O60684 536 aa8.8□□□□□ -1
ZNF540-202ENST00000343599 CAND2O75155 1236 aa8.8□□□□□ -1
ZNF540-202ENST00000343599 EGFRP00533 1210 aa8.8□□□□□ -1
ZNF540-202ENST00000343599 DNTTIP2Q5QJE6 756 aaKnown RBP8.8□□□□□ -1
ZNF540-202ENST00000343599 U2AF1L4Q8WU68 220 aaKnown RBP8.8□□□□□ -1
ZNF540-202ENST00000343599 PAPLNO95428 1278 aa8.79□□□□□ -1
ZNF540-202ENST00000343599 MCM4P33991 863 aa8.79□□□□□ -1
ZNF540-202ENST00000343599 PRMT6Q96LA8 375 aaPredicted RBP8.79□□□□□ -1
ZNF540-202ENST00000343599 C1QTNF1Q9BXJ1 281 aa8.79□□□□□ -1
ZNF540-202ENST00000343599 SH2D4AQ9H788 454 aa8.79□□□□□ -1
ZNF540-202ENST00000343599 HMX1Q9NP08 348 aaPredicted RBP8.79□□□□□ -1
ZNF540-202ENST00000343599 COLQQ9Y215 455 aaPredicted RBP8.79□□□□□ -1
ZNF540-202ENST00000343599 PDHXO00330 501 aa8.79□□□□□ -1
ZNF540-202ENST00000343599 SMARCA5O60264 1052 aaPredicted RBP8.79□□□□□ -1
ZNF540-202ENST00000343599 EFCAB14O75071 495 aa8.79□□□□□ -1
ZNF540-202ENST00000343599 API5Q9BZZ5 524 aaKnown RBP8.79□□□□□ -1
ZNF540-202ENST00000343599 SRCIN1Q9C0H9 1055 aa8.79□□□□□ -1
ZNF540-202ENST00000343599 COG5Q9UP83 839 aa8.79□□□□□ -1
ZNF540-202ENST00000343599 ZMYM6O95789 1325 aa8.79□□□□□ -1
ZNF540-202ENST00000343599 LOXHD1Q8IVV2 1947 aa8.79□□□□□ -1
ZNF540-202ENST00000343599 ZNF500O60304 480 aaPredicted RBP8.79□□□□□ -1
ZNF540-202ENST00000343599 CCDC173Q0VFZ6 552 aa8.79□□□□□ -1
ZNF540-202ENST00000343599 RAB30Q15771 203 aa8.79□□□□□ -1
ZNF540-202ENST00000343599 SESTD1Q86VW0 696 aa8.79□□□□□ -1
ZNF540-202ENST00000343599 RBM27Q9P2N5 1060 aaKnown RBP8.79□□□□□ -1
ZNF540-202ENST00000343599 USP17L5A8MUK1 530 aa8.78□□□□□ -1
ZNF540-202ENST00000343599 H0YGN5 161 aa8.78□□□□□ -1
ZNF540-202ENST00000343599 RGS20O76081 388 aa8.78□□□□□ -1
ZNF540-202ENST00000343599 ASNSP08243 561 aa8.78□□□□□ -1
ZNF540-202ENST00000343599 GHRHRQ02643 423 aa8.78□□□□□ -1
ZNF540-202ENST00000343599 BECN1Q14457 450 aa8.78□□□□□ -1
ZNF540-202ENST00000343599 AAK1Q2M2I8 961 aa8.78□□□□□ -1
ZNF540-202ENST00000343599 HS1BP3Q53T59 392 aa8.78□□□□□ -1
ZNF540-202ENST00000343599 DNAJC2Q99543 621 aaKnown RBP8.78□□□□□ -1
ZNF540-202ENST00000343599 SEC31BQ9NQW1 1179 aa8.78□□□□□ -1
ZNF540-202ENST00000343599 PLA2G5P39877 138 aa8.78□□□□□ -1
ZNF540-202ENST00000343599 NOVP48745 357 aa8.78□□□□□ -1
ZNF540-202ENST00000343599 SOX10P56693 466 aa8.78□□□□□ -1
ZNF540-202ENST00000343599 RPAP2Q8IXW5 612 aaPredicted RBP8.78□□□□□ -1
ZNF540-202ENST00000343599 MICALL1Q8N3F8 863 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms