RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 C12orf60Q5U649 245 aa21.56■■□□□ 1.04
HOXA9-201ENST00000343483 CCAR1Q8IX12 1150 aaKnown RBP21.56■■□□□ 1.04
HOXA9-201ENST00000343483 AMOTL1Q8IY63 956 aa21.56■■□□□ 1.04
HOXA9-201ENST00000343483 CRACR2BQ8N4Y2 399 aaPredicted RBP21.56■■□□□ 1.04
HOXA9-201ENST00000343483 MPNDQ8N594 471 aa21.56■■□□□ 1.04
HOXA9-201ENST00000343483 TBC1D22AQ8WUA7 517 aa21.56■■□□□ 1.04
HOXA9-201ENST00000343483 PPP1R1BQ9UD71 204 aaPredicted RBP21.56■■□□□ 1.04
HOXA9-201ENST00000343483 NRXN2Q9P2S2 1712 aa21.55■■□□□ 1.04
HOXA9-201ENST00000343483 KIAA1551Q9HCM1 1747 aa21.55■■□□□ 1.04
HOXA9-201ENST00000343483 TSPY2A6NKD2 308 aa21.55■■□□□ 1.04
HOXA9-201ENST00000343483 PTMAP06454 111 aaKnown RBP21.55■■□□□ 1.04
HOXA9-201ENST00000343483 GTF2IP78347 998 aa21.55■■□□□ 1.04
HOXA9-201ENST00000343483 STK38Q15208 465 aa21.55■■□□□ 1.04
HOXA9-201ENST00000343483 NBPF11Q86T75 865 aa21.55■■□□□ 1.04
HOXA9-201ENST00000343483 FBXW7Q969H0 707 aa21.55■■□□□ 1.04
HOXA9-201ENST00000343483 MASTLQ96GX5 879 aa21.55■■□□□ 1.04
HOXA9-201ENST00000343483 NAP1L5Q96NT1 182 aaPredicted RBP21.55■■□□□ 1.04
HOXA9-201ENST00000343483 POLR3EQ9NVU0 708 aa21.55■■□□□ 1.04
HOXA9-201ENST00000343483 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.55■■□□□ 1.04
HOXA9-201ENST00000343483 LAMB1P07942 1786 aa21.54■■□□□ 1.04
HOXA9-201ENST00000343483 SF3A1Q15459 793 aaKnown RBP21.54■■□□□ 1.04
HOXA9-201ENST00000343483 DPP8Q6V1X1 898 aaPredicted RBP21.54■■□□□ 1.04
HOXA9-201ENST00000343483 MAPKAPK5Q8IW41 473 aa21.54■■□□□ 1.04
HOXA9-201ENST00000343483 LINC00301Q8NCQ3 95 aa21.54■■□□□ 1.04
HOXA9-201ENST00000343483 ZC3H12CQ9C0D7 883 aaKnown RBP21.54■■□□□ 1.04
HOXA9-201ENST00000343483 TMX4Q9H1E5 349 aaPredicted RBP21.54■■□□□ 1.04
HOXA9-201ENST00000343483 CLSTN2Q9H4D0 955 aa21.54■■□□□ 1.04
HOXA9-201ENST00000343483 ZKSCAN5Q9Y2L8 839 aa21.54■■□□□ 1.04
HOXA9-201ENST00000343483 LTBP1Q14766 1721 aa21.54■■□□□ 1.04
HOXA9-201ENST00000343483 CKAP2LQ8IYA6 745 aa21.54■■□□□ 1.04
HOXA9-201ENST00000343483 ZNF622Q969S3 477 aaKnown RBP eCLIP21.54■■□□□ 1.04
HOXA9-201ENST00000343483 DYNLL2Q96FJ2 89 aa21.54■■□□□ 1.04
HOXA9-201ENST00000343483 COA1Q9GZY4 146 aa21.54■■□□□ 1.04
HOXA9-201ENST00000343483 DEXIO95424 95 aa21.53■■□□□ 1.04
HOXA9-201ENST00000343483 PPP2R5BQ15173 497 aa21.53■■□□□ 1.04
HOXA9-201ENST00000343483 CERS3Q8IU89 383 aa21.53■■□□□ 1.04
HOXA9-201ENST00000343483 KCNG4Q8TDN1 519 aa21.53■■□□□ 1.04
HOXA9-201ENST00000343483 GOLPH3LQ9H4A5 285 aa21.53■■□□□ 1.04
HOXA9-201ENST00000343483 SAP30BPQ9UHR5 308 aaKnown RBP21.53■■□□□ 1.04
HOXA9-201ENST00000343483 GPR75-ASB3A0A0A6YYF3 556 aa21.52■■□□□ 1.04
HOXA9-201ENST00000343483 YEATS4O95619 227 aa21.52■■□□□ 1.04
HOXA9-201ENST00000343483 CCDC73Q6ZRK6 1079 aa21.52■■□□□ 1.04
HOXA9-201ENST00000343483 SLF2Q8IX21 1173 aa21.52■■□□□ 1.04
HOXA9-201ENST00000343483 PCDHA7Q9UN72 937 aa21.52■■□□□ 1.04
HOXA9-201ENST00000343483 MYH2Q9UKX2 1941 aa21.52■■□□□ 1.04
HOXA9-201ENST00000343483 ADCY5O95622 1261 aa21.52■■□□□ 1.04
HOXA9-201ENST00000343483 CALM1P0DP23 149 aa21.52■■□□□ 1.04
HOXA9-201ENST00000343483 CALM2P0DP24 149 aa21.52■■□□□ 1.04
HOXA9-201ENST00000343483 CALM3P0DP25 149 aa21.52■■□□□ 1.04
HOXA9-201ENST00000343483 POLD1P28340 1107 aa21.52■■□□□ 1.04
HOXA9-201ENST00000343483 TROAPQ12815 778 aa21.52■■□□□ 1.04
HOXA9-201ENST00000343483 ANO1Q5XXA6 986 aa21.52■■□□□ 1.04
HOXA9-201ENST00000343483 TEX11Q8IYF3 940 aa21.52■■□□□ 1.04
HOXA9-201ENST00000343483 FHDC1Q9C0D6 1143 aaPredicted RBP21.52■■□□□ 1.04
HOXA9-201ENST00000343483 FAM205AQ6ZU69 1335 aa21.52■■□□□ 1.03
HOXA9-201ENST00000343483 SPTLC2O15270 562 aa21.51■■□□□ 1.03
HOXA9-201ENST00000343483 DDAH1O94760 285 aa21.51■■□□□ 1.03
HOXA9-201ENST00000343483 AKAP17AQ02040 695 aaKnown RBP21.51■■□□□ 1.03
HOXA9-201ENST00000343483 FSIP1Q8NA03 581 aa21.51■■□□□ 1.03
HOXA9-201ENST00000343483 MKNK2Q9HBH9 465 aa21.51■■□□□ 1.03
HOXA9-201ENST00000343483 KCNJ14Q9UNX9 436 aa21.51■■□□□ 1.03
HOXA9-201ENST00000343483 ECM29Q5VYK3 1845 aa21.51■■□□□ 1.03
HOXA9-201ENST00000343483 PLCG2P16885 1265 aa21.51■■□□□ 1.03
HOXA9-201ENST00000343483 U2AF2P26368 475 aaKnown RBP eCLIP21.51■■□□□ 1.03
HOXA9-201ENST00000343483 TFAP4Q01664 338 aa21.51■■□□□ 1.03
HOXA9-201ENST00000343483 SAFBQ15424 915 aaKnown RBP eCLIP21.51■■□□□ 1.03
HOXA9-201ENST00000343483 DOK7Q18PE1 504 aa21.51■■□□□ 1.03
HOXA9-201ENST00000343483 C2CD5Q86YS7 1000 aa21.51■■□□□ 1.03
HOXA9-201ENST00000343483 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.51■■□□□ 1.03
HOXA9-201ENST00000343483 RBM28Q9NW13 759 aaKnown RBP21.51■■□□□ 1.03
HOXA9-201ENST00000343483 ZNF500O60304 480 aaPredicted RBP21.5■■□□□ 1.03
HOXA9-201ENST00000343483 PLEKHA8P1O95397 391 aa21.5■■□□□ 1.03
HOXA9-201ENST00000343483 MMP1P03956 469 aa21.5■■□□□ 1.03
HOXA9-201ENST00000343483 TYRO3Q06418 890 aa21.5■■□□□ 1.03
HOXA9-201ENST00000343483 RNF26Q9BY78 433 aaPredicted RBP21.5■■□□□ 1.03
HOXA9-201ENST00000343483 ROBO3Q96MS0 1386 aa21.5■■□□□ 1.03
HOXA9-201ENST00000343483 COL11A2P13942 1736 aaPredicted RBP21.5■■□□□ 1.03
HOXA9-201ENST00000343483 F8W031 263 aaPredicted RBP21.49■■□□□ 1.03
HOXA9-201ENST00000343483 G3V3G9 751 aa21.49■■□□□ 1.03
HOXA9-201ENST00000343483 PLCD1P51178 756 aa21.49■■□□□ 1.03
HOXA9-201ENST00000343483 DCAF8Q5TAQ9 597 aa21.49■■□□□ 1.03
HOXA9-201ENST00000343483 ADALQ6DHV7 355 aa21.49■■□□□ 1.03
HOXA9-201ENST00000343483 FAM160A1Q05DH4 1040 aa21.49■■□□□ 1.03
HOXA9-201ENST00000343483 DIS3L2Q8IYB7 885 aaKnown RBP21.49■■□□□ 1.03
HOXA9-201ENST00000343483 SLC44A5Q8NCS7 719 aa21.49■■□□□ 1.03
HOXA9-201ENST00000343483 CTCFLQ8NI51 663 aaPredicted RBP21.49■■□□□ 1.03
HOXA9-201ENST00000343483 MRPS27Q92552 414 aaKnown RBP21.49■■□□□ 1.03
HOXA9-201ENST00000343483 FAM163AQ96GL9 167 aaPredicted RBP21.49■■□□□ 1.03
HOXA9-201ENST00000343483 MRVI1Q9Y6F6 885 aa21.49■■□□□ 1.03
HOXA9-201ENST00000343483 GAKO14976 1311 aa21.49■■□□□ 1.03
HOXA9-201ENST00000343483 BTBD18B2RXH4 712 aa21.48■■□□□ 1.03
HOXA9-201ENST00000343483 PRKCSHP14314 528 aaPredicted RBP21.48■■□□□ 1.03
HOXA9-201ENST00000343483 SNW1Q13573 536 aaKnown RBP21.48■■□□□ 1.03
HOXA9-201ENST00000343483 NOSTRINQ8IVI9 506 aa21.48■■□□□ 1.03
HOXA9-201ENST00000343483 FLT1P17948 1338 aa21.48■■□□□ 1.03
HOXA9-201ENST00000343483 hCG_1642624A0A1W2PR95 340 aa21.48■■□□□ 1.03
HOXA9-201ENST00000343483 H0YIN7 160 aa21.48■■□□□ 1.03
HOXA9-201ENST00000343483 KINO60870 393 aaKnown RBP21.48■■□□□ 1.03
HOXA9-201ENST00000343483 RHBDL3P58872 404 aa21.48■■□□□ 1.03
HOXA9-201ENST00000343483 PLCB2Q00722 1185 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms