RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 SH2D4AQ9H788 454 aa19.44■□□□□ 0.7
SMAD4-201ENST00000342988 FAM135AQ9P2D6 1515 aa19.44■□□□□ 0.7
SMAD4-201ENST00000342988 EIF3CLB5ME19 914 aaKnown RBP19.44■□□□□ 0.7
SMAD4-201ENST00000342988 C16orf87Q6PH81 154 aa19.44■□□□□ 0.7
SMAD4-201ENST00000342988 EIF3CQ99613 913 aaKnown RBP19.44■□□□□ 0.7
SMAD4-201ENST00000342988 MYD88Q99836 296 aa19.44■□□□□ 0.7
SMAD4-201ENST00000342988 RAD51AP2Q09MP3 1159 aa19.44■□□□□ 0.7
SMAD4-201ENST00000342988 SKIP12755 728 aa19.43■□□□□ 0.7
SMAD4-201ENST00000342988 TYRO3Q06418 890 aa19.43■□□□□ 0.7
SMAD4-201ENST00000342988 CWF19L2Q2TBE0 894 aaKnown RBP19.43■□□□□ 0.7
SMAD4-201ENST00000342988 HSP90AA4PQ58FG1 418 aa19.43■□□□□ 0.7
SMAD4-201ENST00000342988 NOC4LQ9BVI4 516 aaKnown RBP19.43■□□□□ 0.7
SMAD4-201ENST00000342988 ERICH3Q5RHP9 1530 aa19.43■□□□□ 0.7
SMAD4-201ENST00000342988 SFMBT1Q9UHJ3 866 aa19.43■□□□□ 0.7
SMAD4-201ENST00000342988 PLCD1P51178 756 aa19.43■□□□□ 0.7
SMAD4-201ENST00000342988 DDX42Q86XP3 938 aaKnown RBP eCLIP19.43■□□□□ 0.7
SMAD4-201ENST00000342988 TRIM50Q86XT4 487 aa19.43■□□□□ 0.7
SMAD4-201ENST00000342988 ELP1O95163 1332 aa19.43■□□□□ 0.7
SMAD4-201ENST00000342988 CCDC92Q53HC0 331 aaPredicted RBP19.43■□□□□ 0.7
SMAD4-201ENST00000342988 CFAP61Q8NHU2 1237 aa19.43■□□□□ 0.7
SMAD4-201ENST00000342988 SPTLC2O15270 562 aa19.43■□□□□ 0.7
SMAD4-201ENST00000342988 ASPHQ12797 758 aa19.43■□□□□ 0.7
SMAD4-201ENST00000342988 ZNF804AQ7Z570 1209 aa19.43■□□□□ 0.7
SMAD4-201ENST00000342988 NR1I2O75469 434 aa19.43■□□□□ 0.7
SMAD4-201ENST00000342988 DHX58Q96C10 678 aa19.42■□□□□ 0.7
SMAD4-201ENST00000342988 TTC25Q96NG3 672 aa19.42■□□□□ 0.7
SMAD4-201ENST00000342988 GSDMAQ96QA5 445 aa19.42■□□□□ 0.7
SMAD4-201ENST00000342988 TACO1Q9BSH4 297 aaKnown RBP19.42■□□□□ 0.7
SMAD4-201ENST00000342988 IQCB1Q15051 598 aa19.42■□□□□ 0.7
SMAD4-201ENST00000342988 CCDC186Q7Z3E2 898 aa19.42■□□□□ 0.7
SMAD4-201ENST00000342988 TTI1O43156 1089 aa19.42■□□□□ 0.7
SMAD4-201ENST00000342988 TMTC3Q6ZXV5 915 aa19.42■□□□□ 0.7
SMAD4-201ENST00000342988 ZFYVE1Q9HBF4 777 aa19.42■□□□□ 0.7
SMAD4-201ENST00000342988 CCDC141Q6ZP82 1450 aa19.42■□□□□ 0.7
SMAD4-201ENST00000342988 FBXW4P57775 412 aa19.42■□□□□ 0.7
SMAD4-201ENST00000342988 HP1BP3Q5SSJ5 553 aaPredicted RBP19.42■□□□□ 0.7
SMAD4-201ENST00000342988 CDKL2Q92772 493 aa19.42■□□□□ 0.7
SMAD4-201ENST00000342988 RUNDC3BQ96NL0 473 aa19.42■□□□□ 0.7
SMAD4-201ENST00000342988 OLA1Q9NTK5 396 aaKnown RBP19.42■□□□□ 0.7
SMAD4-201ENST00000342988 HGSO14964 777 aaPredicted RBP19.41■□□□□ 0.7
SMAD4-201ENST00000342988 NVLO15381 856 aaKnown RBP19.41■□□□□ 0.7
SMAD4-201ENST00000342988 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.41■□□□□ 0.7
SMAD4-201ENST00000342988 KRT10P13645 584 aa19.41■□□□□ 0.7
SMAD4-201ENST00000342988 KRT4P19013 534 aa19.41■□□□□ 0.7
SMAD4-201ENST00000342988 POLR2BP30876 1174 aaKnown RBP19.41■□□□□ 0.7
SMAD4-201ENST00000342988 ECE1P42892 770 aa19.41■□□□□ 0.7
SMAD4-201ENST00000342988 ABTB1Q969K4 478 aaPredicted RBP19.41■□□□□ 0.7
SMAD4-201ENST00000342988 NR1H4Q96RI1 486 aaPredicted RBP19.41■□□□□ 0.7
SMAD4-201ENST00000342988 FGD4Q96M96 766 aa19.41■□□□□ 0.7
SMAD4-201ENST00000342988 CDK19Q9BWU1 502 aa19.41■□□□□ 0.7
SMAD4-201ENST00000342988 BIN2Q9UBW5 565 aaPredicted RBP19.41■□□□□ 0.7
SMAD4-201ENST00000342988 NOP56O00567 594 aaKnown RBP19.41■□□□□ 0.7
SMAD4-201ENST00000342988 SRGAP2BP0DMP2 458 aa19.41■□□□□ 0.7
SMAD4-201ENST00000342988 KRT71Q3SY84 523 aa19.41■□□□□ 0.7
SMAD4-201ENST00000342988 FCHSD1Q86WN1 690 aa19.41■□□□□ 0.7
SMAD4-201ENST00000342988 MAP3K10Q02779 954 aa19.41■□□□□ 0.7
SMAD4-201ENST00000342988 SRRM1Q8IYB3 904 aaKnown RBP19.41■□□□□ 0.7
SMAD4-201ENST00000342988 LRRC37BQ96QE4 947 aa19.41■□□□□ 0.7
SMAD4-201ENST00000342988 IMPACTQ9P2X3 320 aa19.41■□□□□ 0.7
SMAD4-201ENST00000342988 TRAF5O00463 557 aa19.41■□□□□ 0.7
SMAD4-201ENST00000342988 ZCRB1Q8TBF4 217 aaKnown RBP19.41■□□□□ 0.7
SMAD4-201ENST00000342988 ATP6V0A4Q9HBG4 840 aa19.41■□□□□ 0.7
SMAD4-201ENST00000342988 NFKBIL1Q9UBC1 381 aaPredicted RBP19.41■□□□□ 0.7
SMAD4-201ENST00000342988 SPDYE2BA6NHP3 402 aa19.4■□□□□ 0.7
SMAD4-201ENST00000342988 SPDYE6P0CI01 402 aa19.4■□□□□ 0.7
SMAD4-201ENST00000342988 RINT1Q6NUQ1 792 aa19.4■□□□□ 0.7
SMAD4-201ENST00000342988 ECHDC1Q9NTX5 307 aa19.4■□□□□ 0.7
SMAD4-201ENST00000342988 ZNF263O14978 683 aa19.4■□□□□ 0.7
SMAD4-201ENST00000342988 SYT10Q6XYQ8 523 aa19.4■□□□□ 0.7
SMAD4-201ENST00000342988 MGARPQ8TDB4 240 aa19.4■□□□□ 0.7
SMAD4-201ENST00000342988 LZICQ8WZA0 190 aa19.4■□□□□ 0.7
SMAD4-201ENST00000342988 IRAK4Q9NWZ3 460 aa19.4■□□□□ 0.7
SMAD4-201ENST00000342988 KRT87PA6NCN2 255 aa19.4■□□□□ 0.7
SMAD4-201ENST00000342988 STX1BP61266 288 aa19.4■□□□□ 0.7
SMAD4-201ENST00000342988 ENAHQ8N8S7 591 aaPredicted RBP19.4■□□□□ 0.7
SMAD4-201ENST00000342988 HEXIM1O94992 359 aaKnown RBP19.4■□□□□ 0.7
SMAD4-201ENST00000342988 MRPL28Q13084 256 aaKnown RBP19.4■□□□□ 0.7
SMAD4-201ENST00000342988 PEX26Q7Z412 305 aa19.4■□□□□ 0.7
SMAD4-201ENST00000342988 TEX9Q8N6V9 391 aa19.4■□□□□ 0.7
SMAD4-201ENST00000342988 SERPINI1Q99574 410 aa19.4■□□□□ 0.7
SMAD4-201ENST00000342988 VPS37BQ9H9H4 285 aa19.4■□□□□ 0.7
SMAD4-201ENST00000342988 GDPD2Q9HCC8 539 aa19.4■□□□□ 0.7
SMAD4-201ENST00000342988 KRT82Q9NSB4 513 aa19.4■□□□□ 0.7
SMAD4-201ENST00000342988 KLF18A0A0U1RQI7 1052 aa19.4■□□□□ 0.7
SMAD4-201ENST00000342988 ACBD5Q5T8D3 534 aaPredicted RBP19.4■□□□□ 0.7
SMAD4-201ENST00000342988 FBXL13Q8NEE6 735 aa19.4■□□□□ 0.7
SMAD4-201ENST00000342988 ARHGAP44Q17R89 818 aa19.39■□□□□ 0.7
SMAD4-201ENST00000342988 THEMISQ8N1K5 641 aaPredicted RBP19.39■□□□□ 0.7
SMAD4-201ENST00000342988 SECISBP2LQ93073 1101 aaKnown RBP19.39■□□□□ 0.7
SMAD4-201ENST00000342988 H3BRJ5 948 aa19.39■□□□□ 0.69
SMAD4-201ENST00000342988 OCA2Q04671 838 aa19.39■□□□□ 0.69
SMAD4-201ENST00000342988 TRIM59Q8IWR1 403 aa19.39■□□□□ 0.69
SMAD4-201ENST00000342988 IFNKQ9P0W0 207 aa19.39■□□□□ 0.69
SMAD4-201ENST00000342988 GOLGA8KD6RF30 607 aa19.39■□□□□ 0.69
SMAD4-201ENST00000342988 PATL1Q86TB9 770 aaKnown RBP19.39■□□□□ 0.69
SMAD4-201ENST00000342988 SPZ1Q9BXG8 430 aa19.39■□□□□ 0.69
SMAD4-201ENST00000342988 CAPN7Q9Y6W3 813 aa19.39■□□□□ 0.69
SMAD4-201ENST00000342988 CADPSQ9ULU8 1353 aa19.39■□□□□ 0.69
SMAD4-201ENST00000342988 TUBB6Q9BUF5 446 aa19.39■□□□□ 0.69
SMAD4-201ENST00000342988 GLE1Q53GS7 698 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 287.4 ms